Pseudopodoces humilis (Tibetan ground-tit): 102114221
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Entry
102114221 CDS
T02921
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102114221 (SIX4)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
102114221 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
102114221
NCBI-ProteinID:
XP_005520101
LinkDB
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Position
Unknown
AA seq
771 aa
AA seq
DB search
MSSASPATDDIVIAVEIKEENVMEMLSEAPDGPAPPPPPAAAPFPMEHAGSAAAGEEGAA
EQVLLHTELLARNHHAASSPSSSSSSSSSSSQTPLAFSPDHVACVCEALQQGGNLDRLAR
FLWSLPQSDLLRGNESLMKARALVAFHQGIYAELYSILESHNFDSSNHPLLQELWYKARY
TEAERARGRPLGAVDKYRLRRKYPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPA
EKRNLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGREDLSPHP
LSSSSDGVTSLSLPGHMEPVYMQQLGNTKIALSSSGVLLNGNLMSASTSPVFLNGSSFLQ
GPNSVILNGLSVGTSQTVTLNSPKTASSVVSNGVSITDILSSSSSEDVKDFKLLQASVPN
ATAAFSPSNIPVTFPGLIPSSEVKREGVETAASQDGGSVVTFTAPVQINQYGIVQIPNSG
TNGQLLNGSIGFSSLQLPPVSVAASQGNVSVNPSTSDGGTFTTESSTVQQGKVFFSPLAP
SAVVYTVPNSGQAVGSVKQEGLERSLVFSQLMPVSQNTQLNVNMSSENISSAGLQSLASS
LVNVTPSHNFSLTPPTLLNAAELSSGISESQSMSSPVTSTSTVISISNTNYATLQNCPLI
TSQDLLSISTAQPVLGEIVSTSGDRVSHPPAQVHQDFGREHRLVLQAVPDVKENFLPNSE
SKSTGNLMMLDSKSKYVMSNMVDTVCEELETDKKELAKLQTVQMDEVMQDL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcctcccccgccacggacgacatcgtgatcgcggtagagatcaaggaggaa
aatgtgatggaaatgctctccgaagcccccgacgggcccgcgccgccgccccctcccgcc
gctgccccgttccccatggagcatgcaggctccgccgccgccggcgaggagggagccgcg
gaacaggtactgctccatacggaactcttggccaggaatcaccacgctgcctcctctccc
tcctcttcgtcgtcttcctcctcctcctcctcgcagacccccctggctttctccccggac
cacgtcgcctgcgtgtgcgaggcgctgcaacaaggtgggaacctggaccgcctggccagg
ttcctgtggtctttgccccagagcgatctgctacgtggcaacgagagcctgatgaaagcc
cgggcgctggtggcttttcaccagggcatctacgccgagctctacagcatcctggagagc
cacaacttcgactcctccaaccacccgctgctgcaggagctctggtacaaggctcgctac
accgaggcggagcgagcccggggcagacccttgggggcggtggacaagtacaggttgcgg
aggaaataccccctgcccaggaccatctgggacggcgaggagaccgtctactgcttcaag
gagaagtcccgcaacgctctgaaggagctctacaagcagaaccgatacccctcgcccgcc
gagaagcgcaacctggccaagatcaccgggctgtccctcacccaggtcagcaactggttc
aagaaccgtaggcagcgggaccgcaacccttccgagacccagtccaaaagcgagtctgat
ggcaaccctagcacagaagatgaatccagtaaggggcgggaggatttatctccccatcca
ctctccagctcatctgatggcgttaccagcctcagccttcccggccacatggagcctgtc
tacatgcagcagcttggaaacactaaaatagccttgagctcgtctggtgtcttgttgaat
gggaacctcatgtctgccagtacctctcctgtcttcctcaacggtagctcatttcttcag
ggacccaacagcgtcatactcaatggactcagcgtgggcacttcgcagactgttacctta
aattcgcccaaaaccgcatcaagtgttgtgagcaacggggtgtccatcactgacatactg
tcatcatcgtcgtcagaagatgttaaagacttcaaactccttcaggcttcagtccccaat
gccacagcagccttcagccctagcaacatcccagtcactttcccaggattgataccgagc
tcagaagtgaaaagggaaggcgtagaaactgctgcttcccaggatggaggctccgtagtt
acttttactgctcctgtccaaataaaccagtatggcattgtccagatccccaattcagga
acaaatggccagctgctgaacggaagcattggtttttcttctctgcagctgcctccagtt
tctgtggcagcttcacaaggtaatgtttcagtaaaccccagcacatctgatggaggaact
tttacaactgaatcttcaacagtgcagcaaggaaaggttttcttcagcccccttgctccg
agtgcagtggtttataccgttcccaattcgggccaggcagtaggatctgtcaagcaagaa
ggactggaaagaagcctggtgttttctcagttgatgccagtcagtcagaacacgcaactg
aacgtcaacatgtcttctgaaaatatatccagtgcaggactccagtccctggcctcctcg
ttagtgaatgtaacgccctcacataatttttcccttacaccaccaactcttttaaatgct
gcagaactgagctctggtatctcagagagtcagtccatgtcttcacctgtgaccagtacc
tctacggtgatatctatcagcaacactaactatgcaaccctccagaactgtcccctcatc
accagtcaggatctgttgtccatttctacagcacagcccgtgcttggagaaatagtttcg
acaagtggagaccgtgtcagccacccccctgcacaagtgcaccaggattttggcagagag
cacaggttggttctgcaagctgtacctgatgtcaaagagaatttcttacctaattctgag
agtaagtcaactggcaatttaatgatgctggattccaaatctaagtatgttatgagtaac
atggttgacacggtatgtgaagaactggaaacggacaaaaaagaacttgccaaactgcag
acagttcagatggatgaagttatgcaagacttgtaa
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