Pseudopodoces humilis (Tibetan ground-tit): 106628572
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Entry
106628572 CDS
T02921
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phi00536
]
106628572 (COL13A1)
Glycosaminoglycan binding proteins [BR:
phi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106628572 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106628572
NCBI-ProteinID:
XP_014114752
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All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MLEEKSWKGVDEAAFDRGCVAPPRSGDGERCCRLPLLLGSGLPGVSLLSLVLSLLLYFRT
SDLQSRVSHLEADRPTQLPAWLSADQMETAILGRVDQLLNEKLKFHLPRHREVRDTHQRC
NCPAGPPGDKGAMGIPGRPGLKGQSGEKGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPI
GLDGKPGHPGQKGEMGAAGPRGQPGPPGQKGEKGQCAEYPHREYLSTTLAALRSNQILTL
KGEQGQAGIQGPPGPPGPPGPAGPAGPEGIPGRPGPIGPPGRAGEPGKPGRDGKGLPGPP
GPKGDAGIQGYPGRKGAPGMAAAGMKGEPGTPGEKGDSGVPGRMGPPGLPGKRGQRGEKG
RAGDPGLPGLPGPKGEKGIAENALVGAKGEPGPPGLPGPPGPKGEAGDVGQPGAAGSQGE
KGERGSPGDQGPMGPRGPKGEPGKDEMMDYDGNISEALQEIRTLALMGPPGRPGVAGPPG
PPGQKGEIGLPGPPGHDGEKGPRGKPGEMGPPGPHGLPGKDGPPGIKGEPGNIGVRGEKG
DKGEPGQAGSPGLDGPTGEKGERGDQGIPGPSGLPGPIGLPGLTGEKGEPGERGDKGNPG
ESISGPPGPQGPPGPPGLQGIPGPKGEAGIDGVKGEKGAQGEKGDRGPLGLPGASGLDGR
PGPPGIPGPVGVSGPAGPKGERGSKGDPGVAGPMGPAGLPGLQGLPGDKGVRGERGKKGS
RGSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNKGQTPWLIARK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggagaagagctggaaaggcgtcgacgaagcagcttttgacagggggtgtgtg
gctccccccaggagcggcgatggggagagatgctgccgcctccctctcctgctgggctcg
gggctgcccggcgtctccctgctctctctggtgctgagcctcctgctgtactttcggacc
tccgatctgcagtcccgggtgtcccacttggaagcggacagacccacacagctccctgcc
tggctctcagcagaccaaatggagacagctattttgggaagagttgaccaactgctcaat
gagaaattaaagttccacttgccaagacatcgagaagttcgagacacacaccagcgatgc
aactgcccggcaggtccgcctggagacaaaggtgcgatgggaatccctgggcggccggga
ctaaaagggcaatccggagagaagggtgctccaggagaagctggcatgtctatcatcggg
ccccgcggtccacccggacagcctggaacaagaggttttcctggattcccgggccctatt
ggcttggatggcaaaccgggccatcctggacagaagggagagatgggtgctgcaggtccc
aggggacaacctggacccccaggacaaaaaggagagaagggtcagtgtgcagagtacccg
cacagggaatacctaagtaccacacttgcagccctgcgctctaaccagatccttacgctg
aagggtgaacaaggacaagcggggatccaaggtcccccagggccccctggtccgccaggg
cctgctggaccagctggacccgaaggaatcccaggacgtcctgggccaattggaccccct
ggcagagcaggagaacctggaaaacctggcagagatggaaagggcttacctgggcctcct
ggaccaaagggagacgctgggattcagggataccctggcagaaagggcgctcctgggatg
gctgccgcagggatgaagggcgagcctgggactccaggagaaaagggagattctggagtc
ccagggaggatgggccccccaggtttgccagggaagagggggcagcggggtgagaaggga
cgagctggtgaccctgggcttcctggactccctggcccaaagggagagaagggaattgct
gagaatgctttggtgggagctaaaggagaacctggccctccaggtctgcctggaccccct
ggaccaaagggagaagctggtgatgttggtcagcctggtgctgcaggatcacagggagaa
aagggggaacgtggttcaccgggagaccagggacccatgggcccaaggggccccaaagga
gagcctgggaaggatgaaatgatggactatgatgggaacatcagcgaagctctccaggaa
ataagaactttggccttgatgggacccccaggacgtccaggtgtggctggacctccaggg
ccaccaggacagaagggtgagattggcttgccaggtcctccaggccacgatggagaaaag
ggaccacgtggcaagcctggagaaatgggcccccctggccctcatgggctgccaggaaag
gatggacctcctggaataaagggagagccaggcaacatcggggtcagaggagaaaagggc
gataagggagagccaggacaagcaggctcaccgggtctagatggccccactggagagaag
ggcgaacgaggtgaccaagggataccaggaccatcaggattgccagggcccattggactt
ccaggactgacaggagagaagggtgagcctggggagcgtggagacaaaggaaatccagga
gaatcgatatctgggccccctggaccccaaggccctccaggacctccgggtcttcagggc
attcccggacccaagggggaagcagggattgatggagtgaaaggagagaagggtgcccag
ggtgaaaaaggagacagagggccactgggattacccggtgcttcaggtttagacggcagg
cctggaccaccgggtattccaggaccagttggggtttcgggaccagcaggaccaaaagga
gaaaggggcagtaaaggagatcctggagttgcaggaccaatggggccagcagggcttcct
ggtttacaaggtctacctggtgacaagggagtccggggggagaggggcaagaaaggctct
agagggtctaaaggggataagggagaccaaggagcacctggattagatgcaccctgtccg
ttgggggaagatggccttccagttcaaggctgctggaataagggtcaaactccttggctg
atagccagaaagtga
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