Pseudopodoces humilis (Tibetan ground-tit): 106628978
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Entry
106628978 CDS
T02921
Name
(RefSeq) protocadherin gamma-B5-like
KO
K16496
protocadherin gamma subfamily B
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phi04515
]
106628978
Cell adhesion molecules [BR:
phi04515
]
Cadherins
Protocadherins
106628978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_4
RET_CLD1
Big_9
Motif
Other DBs
NCBI-GeneID:
106628978
NCBI-ProteinID:
XP_014118335
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MAVRRRQRRGPGGGRALLAAVLLCVWWRAAAERLRYAIPEELGRGSLVGPLARDLGLSAD
ELPARKLRLSEEKQYFTVNEENGNLYVNERLDREEMCGESASCSVSFEVLVHNPLNVFHV
EVSIEDVNDNAPEFSKAVLDLEIDEWKPPGSRFLLEMARDADAGSNSLLTYQLSSNPSFS
LAMKDSPDGSKPELVLERALDREKQSSFELILTAVDSGDPSRSGSVQIRVTVTDANDNPP
VFPQDHYLVSLREDTPPGSTVLNLSATDTDAGTNAHISYGFRKMPIKALEKFVVDAESGS
ITLQEALDFEDTRAFSLAVEAKDGGGLVAHCKVEVEVLDVNDNAPEITILSLSSPVPEDA
PLGTVVAVLKVRDRDSGENGQVSCELSGEAALSLVASSGGSYKVVTASALDREQASEQRV
TVVARDRGRPSLWSSRELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQARDAD
AGANGRVSYWLAGGSAGAAGAAPLVSVEARSGALYAQRSFDYEQCREFAVAVRAQDGGAP
ARSSTATVRVFVLDRNDNAPRVLWPAAAAAAGEASSPFEVVPRSAEAGYLVAKVVAVDAD
AGRNAWLSYELVQASEPALFRVGLHSGEVRTARAVSERDAAKQRVVAVVKDHGQPALSAT
ATLHVVLAESLQEALPELSERPAGAEAEATAAAAELQFYLVLALALLSALLVVSVALAVV
ARLRRAGPPAVLRCLGAQRFSLAGAAFPADFCEGTLPYSYNLCVPPPARAVPEAAWPPPP
PPVPPVPVLSAEELLGGDSCEKPSPSSNVVVGEPPADAGALQVCKASAPSAFKSFGNMVH
VFRVFSEW
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaggcggcggcagaggcgcgggccgggcggcgggcgagcgctgctggccgcg
gtgctgctgtgcgtgtggtggcgggcggcggccgagcggctccgctacgccatccccgag
gagctgggcagaggctcgctcgtggggccgctggcgcgggacctggggctcagcgcggac
gagctgccggcgcgcaagctgcggctgagcgaggagaagcaatacttcacggtgaatgag
gagaacggcaacctttacgtgaacgagaggctggaccgggaggagatgtgcggcgagtcg
gcgtcctgctctgtcagcttcgaggtgctggttcacaacccgctgaacgtgttccatgtg
gaggtgtccatcgaggacgtgaatgacaacgccccagagttcagcaaggctgttctggac
ctcgagatcgatgaatggaagcctcccggttcccggttccttctggagatggcacgagac
gctgacgcaggaagcaactctctgctgacttaccaactatccagcaacccgtccttctcc
ctggccatgaaggacagtccggacggaagcaaaccagagttagtactggaaagagcatta
gaccgagagaagcagagttcttttgagcttattctgacggcggttgattccggggacccc
tcgaggtccgggagtgtccagattcgggtgaccgtgacagacgccaatgacaacccaccc
gtattcccgcaggatcactaccttgtgagcctccgtgaggacacgccgccgggttcgaca
gtcctgaatctgtcagccacagacaccgacgccggcaccaacgcccacatcagctacggg
ttcaggaaaatgccgatcaaggcacttgagaagttcgtggtcgatgcagagagtgggtct
atcacgctgcaggaggctttggactttgaggacacgcgcgcgtttagcctggctgtggag
gcgaaggacggagggggtttggttgctcactgcaaggtggaggtggaggtgctggacgtg
aacgacaacgcgcccgagatcaccattctatccctgtccagtcccgtgcccgaggatgcc
ccactcggcaccgtggtggccgtgctgaaagtgcgggacagagactccggggagaacggt
caggtgtcgtgcgagctgtcgggggaggcggcgctgtcgctggtggcgtcgtcgggcggc
tcgtacaaggtggtgacggcgagcgcgctggaccgcgagcaggcgtcggagcagcgcgtg
acggtggtggcccgggaccggggcaggccgtcgctgtggagcagcagggagctggtgctg
gaggtgtcggacgtgaacgacaacgcgccggtgttcgaggaggcggcgtacagcgcgtac
gtggcggagaacaacgcggcgggcgcgctggtgctgcgcgtgcaggcgcgggacgcggac
gcgggcgccaacgggcgcgtgagctactggctggcgggcggcagcgcgggcgcggcgggc
gcggcgccgctggtgtcggtggaggcgcggagcggcgcgctgtacgcgcagcgctccttc
gactacgagcagtgccgcgagttcgcggtggccgtgcgggcgcaggacggcggcgcgccg
gcgcgcagctccacggccacggtgcgcgtcttcgtgctggaccgcaacgacaacgcgccg
cgggtgctctggccggcggcggcggcggcagcgggagaggcgtcgtctccgttcgaggtg
gtgccgcgctcggccgaggccggctacctggtggccaaggtggtggcggtggacgcggac
gcggggcgcaacgcgtggctgtcgtacgagctggtgcaggcgtcggagccggcgctgttc
cgcgtggggctgcacagcggcgaggtgcgcacggcgcgcgccgtgtccgagcgggacgcg
gccaagcagcgtgtggtggccgtggtgaaggaccacgggcagccggcgctgtcggccacg
gccacgctgcacgtggtgctggccgagagcttgcaggaggcgctgccggagctgagcgag
cggccggcgggcgccgaggcggaggcgacggcggcggcggccgagctgcagttctacctg
gtgctggcgctggcgctgctgtcggcgctcttggtggtgagcgtggcgctggccgtggtg
gcgcggctgcgccgggccgggccgcccgccgtgctgcgctgcctgggcgcgcagcgcttc
tcgctggccggcgccgccttcccggccgacttctgcgagggcaccttgccctactcctac
aacctgtgcgtgccgccgccggcccgcgccgtgcccgaggccgcttggccgccgccgccg
cctccggtgccgccggtgcccgtcctgtcggcggaggagcttctgggcggcgattcctgc
gagaagccgagcccgagcagtaacgtcgtcgtgggagagccgcccgccgatgctggtgca
ctgcaggtctgtaaagcgtcagctccttctgcttttaaaagcttcggaaacatggttcat
gttttccgggtattctctgagtggtga
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