Pseudomonas hormoni: KJF94_18545
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Entry
KJF94_18545 CDS
T09556
Name
(GenBank) LysR family transcriptional regulator
KO
K18297
LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
Organism
phom
Pseudomonas hormoni
Module
phom_M00641
Multidrug resistance, efflux pump MexEF-OprN
phom_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
phom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phom03000
]
KJF94_18545
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
phom01504
]
KJF94_18545
Transcription factors [BR:
phom03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KJF94_18545
Antimicrobial resistance genes [BR:
phom01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
KJF94_18545
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
KJF94_18545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QVW26936
LinkDB
All DBs
Position
3984501..3985448
Genome browser
AA seq
315 aa
AA seq
DB search
MNRNDLRKIDFSLLIVFETLMHERNLTRAGEKLFLGQPSISASLNRLRQYFNDPLFIRMG
RSMEPTSRAFEIFQSLTPALDNMVAALGNVSEFDPLTSNAVFRIGLSDDVEYSLLPGMLR
QLRMEAPGVSFVVRRTDHSMMSDQLSTGEVSLGVCHSRELPANAKRKFLRSIYPTVLSSH
SISGAFGLDEYCNRPHVSVSLNGELTDTIDRTLNTMGRQRQVVLAVPQYSALKTLLEDTD
MIAVVPEYVASAMTKQGGLRMDPVPMSIPALELSLAWSGTLDNDPGERWLRSRVCHHLSD
RSGSVSEISLRKAAA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaatgatcttcgcaaaatcgacttcagtcttctgatcgtattcgaaactttg
atgcacgaacgcaaccttacccgcgccggtgaaaaactgtttctcgggcagccttccatc
agtgcttctttgaatcgacttcgtcaatactttaatgacccgctctttatccgcatgggt
aggtcgatggagccgacgagccgagcctttgagatttttcaaagccttactcccgccttg
gacaacatggtcgccgcactcggcaacgtcagcgagtttgatcctctgactagcaatgct
gtgttccggattggcctttcggatgatgttgaatattcgttgctgccagggatgctgcgt
caactgcgcatggaggctccaggagtgagctttgtggtgcgccgtaccgatcactcgatg
atgtccgatcagctttccactggagaagtatcgcttggtgtatgtcacagccgcgaactt
ccggccaacgcaaaacgaaaatttcttcgtagcatctatccgactgtactgagttcccat
tcgatctctggtgccttcggcttagacgagtactgcaatcgcccacacgtttctgtctct
ctcaatggcgaattgaccgacaccatagaccggacgttaaacactatgggacggcagcgc
caagtagtgttggctgttccccaatacagtgctctcaaaacactccttgaagatacggac
atgattgcagtcgtaccggagtacgttgcatcagccatgacaaaacagggcgggttacgg
atggatccggttccaatgagtattcctgcccttgagctgtcgctggcctggagtggaacc
ctggacaacgacccgggagagcgctggcttcgttcccgagtctgccatcacctctctgat
agaagtggctcggtcagcgaaataagccttcgaaaagcagctgcataa
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