Phaeobacter sp. LSS9: D1820_05165
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Entry
D1820_05165 CDS
T05617
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
phq
Phaeobacter sp. LSS9
Pathway
phq00260
Glycine, serine and threonine metabolism
phq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D1820_05165
Enzymes [BR:
phq01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
D1820_05165
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
D1820_05165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
AlaDh_PNT_C
FAD_binding_2
HI0933_like
GIDA
Pyr_redox
DAO
Pyr_redox_3
Thi4
FAD_binding_3
3HCDH_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AXT34412
LinkDB
All DBs
Position
complement(1082530..1085562)
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AA seq
1010 aa
AA seq
DB search
MSTRLAKNGRLIDRSKPIEFTFNGKRMKGYAGDTLASALLANDQMMVGRSFKYHRPRGLV
AAGPEEPNALVGLGTGDRFEPNQRATTTELFSGLSAQSQNHWPSLEFDVGVANNALARFL
PAGFYYKMFIHPRPLWKHVYEPIIRHSAGLGKAPDKELKDADTYEHFYYFADVLVIGGGV
AGLQAAKAAASSGAKVLLLEQNNHWGGRAPVDGGTIDGMEPGAWIEKTLAELRAMDNVTL
RDRCMGAGVYDHGYALGYERLTDHAPGQGGPRHRLWRIRASQIVTATGAIERPLSFAGND
VPGVMLAASMRDYAVNWGVTPGQKVVVATNNDDAYRTAIALHGAGVEVVRVLDARDSGGG
ALMEEVRQLGIRVECGRAIAKVKGGKRVTSVAICAQNGEGGAQEEVEADAVAMSGGWSPV
VHLWSHCGGKLVWDQAHANFRPDASRPPLGADGNGFVIAAGAANGAAGLAAALSDAQAAG
EAAAKAAGRKVKAVAAPVGDAPVEKAMEPVWLMPAKADIKLRMKTWLDYQNDVKVSDVQL
AAREGFESVEHTKRYTTLGMATDQGKLSNINGLAILADALGSEIPQVGTTTFRPPYHPIS
MGSIGGEARGEIFQPLRKTPMYGWHDSNGADWEPVGQWRRPFAYVRSGESLHDAVNREVK
NTRENLGLLDASTLGKLVVKGPDAGKFLDMMYTNMMSTLKVGKCRYGLMCSENGFLIDDG
VVARIDEDTWLCHTTTGGAERIHGHMEEWLQTEWWDWKVYVANVTEQLAQVAVVGPNARK
VLEKLNENAGGGMDLSKEALPFMEWRDGEIGGFKARAYRISFSGELSYEIAVAASDGQAF
WTALMEAGKEFGVMPYGTECLHILRAEKGFIMIGDETDGTVIPQDLGLNWALSKKKEDFL
GKRAHTRSHMADPDRWQLVGLETTDGSVLPDGAYAVGNGVNANGQKNTIGRVTSTYYSSN
LGRGIAMGLVKHGPKRMGEVIEFPGTDGTIYKAKIVDQVFYDKEGEKQNV
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcgccttgccaaaaacggccggttgatcgaccgctccaaaccgatcgaattc
accttcaacggcaagcggatgaagggctatgcaggcgacacgctggcgtctgccctgttg
gccaatgaccagatgatggttggccgctcgttcaaatatcaccgcccgcgtggtctggtt
gcagctggtcccgaagagcccaatgcgcttgtggggctgggcaccggcgaccggttcgaa
cccaatcagcgcgccaccacgaccgagctgttctcgggcctgtcggcgcagtcgcagaac
cactggccgagccttgagttcgacgtgggtgtggccaacaacgcgctggcacgcttcctg
cctgcgggtttctattacaagatgttcatccacccgcgtcccctgtggaaacatgtctat
gagccgatcatccgccactctgcgggtctgggcaaagcgccggacaaggagctgaaggac
gccgacacctacgagcacttttattatttcgccgatgtgctggtgattggtggcggtgtg
gccggtcttcaggcggccaaggcggcggccagctccggtgccaaagtgttgttgctggag
cagaacaatcactggggtggtcgtgcgccggttgacggtggcaccatcgacgggatggag
ccgggcgcctggattgagaaaaccctcgccgagctgcgcgccatggacaatgtcaccctg
cgcgatcgctgcatgggggcaggcgtctatgatcacggctatgcgctggggtatgagcgt
ctgaccgatcacgcgccggggcaaggtggtccgcgccatcgtctgtggcggatccgcgca
agccagattgtgacggcgaccggtgccattgaacggcccctgtcctttgccgggaatgat
gtgccgggcgtgatgctggcggcctccatgcgcgattatgcggtgaactggggggtgacc
ccgggccagaaggtcgtggttgccaccaacaatgacgacgcctatcgcacggcaattgcc
ctgcatggcgcgggtgttgaggtggtccgtgtgctggatgcccgcgacagcggcggcggg
gccctgatggaagaggtccgtcagttgggcatccgcgttgaatgtggccgggccatcgcc
aaggtgaagggcggcaagcgcgtcacatccgtggcgatctgcgcccagaacggcgaaggc
ggcgcgcaggaggaggtcgaggccgatgcggtcgcgatgtccggtggctggtcgccggtt
gtgcacctgtggtcccattgcggtggtaagctggtctgggatcaggcccatgcgaatttc
cgtcccgatgcctcgcgtccgccgctgggtgcggatggcaatgggtttgtcatcgcagca
ggtgccgccaatggcgcggccggtctggcggcggcgttgagcgatgcgcaggccgcaggg
gaagcggcggcgaaggccgctggccgcaaggtcaaagcggtggccgcgccggtcggagat
gcgccggttgaaaaggcgatggagccggtgtggctgatgcctgccaaggctgacatcaag
ctgcgcatgaagacctggctggactatcagaacgacgtcaaagtgtcggacgtgcagctg
gccgcgcgcgaaggtttcgagagcgtcgaacataccaagcgttacaccacgctgggcatg
gcaaccgatcaggggaagctctcgaatatcaacggcttggcgatccttgctgatgcgctt
gggtccgaaattccgcaggtgggcaccaccaccttccgtccgccctatcacccgatttcg
atggggtcgattggcggtgaggcccgcggcgagattttccagccgctgcgcaagacgccg
atgtatggctggcatgacagcaatggtgcggattgggaaccggtgggccagtggcgccgt
cccttcgcctacgtccgctctggcgagagcctgcatgacgcggtgaaccgtgaggtgaag
aacacccgcgagaacctcggcctgctggatgcctcgaccctgggtaagctggtcgtcaag
gggccggatgcgggcaagttcctcgacatgatgtacaccaacatgatgtcgacgctgaaa
gtcggcaaatgccgctacggtctgatgtgttcggagaacgggttcctgatcgacgatggc
gtggttgcgcgcattgatgaggacacctggctttgccacaccaccaccggcggtgccgag
cggatccatggtcatatggaagaatggctgcagaccgaatggtgggactggaaggtctat
gttgccaatgtcaccgaacagctggcgcaggttgccgtcgttggccccaatgcccgcaag
gtgctggaaaagctgaacgaaaacgcgggcggtggtatggacctctccaaggaggcgctg
cccttcatggaatggcgtgacggggagatcggcggcttcaaggcgcgggcctaccggatc
tccttctcgggtgagctgtcctatgagatcgcggttgcggcctcggacgggcaggcgttc
tggaccgcattgatggaagcgggcaaggaattcggggtgatgccttatggcaccgaatgt
ctgcacatcctgcgggccgagaagggcttcatcatgattggtgatgaaaccgacggaacc
gttattccgcaggatctgggcctgaactgggcgctgtcgaagaagaaagaggacttcctc
ggcaagcgggcgcatacccgcagccatatggccgatcccgaccgctggcagctagtgggt
ctggaaacaaccgatggctcggtgctgccggatggcgcctatgcggtgggcaatggtgtg
aatgccaatgggcagaaaaacaccatcgggcgcgtgacctcgacctattactcgtcgaac
ctgggccgtggcattgccatgggtctggtcaagcatggtcccaaacggatgggcgaggtg
atcgaattccccggcaccgacgggacaatctacaaggccaagatcgtcgatcaggtcttt
tacgacaaggaaggggagaagcagaatgtctga
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