Paraburkholderia hospita: C2L64_10200
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Entry
C2L64_10200 CDS
T05305
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
phs
Paraburkholderia hospita
Pathway
phs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2L64_10200 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phs03400
]
C2L64_10200 (recC)
Enzymes [BR:
phs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2L64_10200 (recC)
DNA repair and recombination proteins [BR:
phs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2L64_10200 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AUT68650
UniProt:
A0A1H6PI34
LinkDB
All DBs
Position
1:complement(2247303..2250671)
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AA seq
1122 aa
AA seq
DB search
MLQLFYSNRYDVLVGALLDGLGATPSSPWTAQPVIVPSAAVRRRLELDIAARQGVCANIQ
FSYLAQWLWTQIGGVIKDVPKSSPFSPDRLVWRCYRLLGDADEARPWNASPRLRSYLDAA
DAPMRYELARRVATVLDHYLTYRPEWLLQWQKGGSIFASGAADDSGPRLTGASAAAREDE
RWQGALWRTLLGEVAGDAHSADAATPPAYRFLDEVRSLDLDAIARAEWPESVSVFALPTM
PPLHIALLRELSRWIDVRVYAMNPCREFWFDIVSVGRVEALDAAGQLDYQEVGHPLLAEW
ARQTQAQLHMLHELTESAASAEASYFAENAAPTWLAAVQNGMLDLRDERDLDAQPEERGI
EVHVCHSLARQLEVLHDRLLGWFDEFDDLQPSDVLVTLPDLGAAGPLIDAVFGTAPSGDT
RRIPYRITGLPPSQANPVARVLLDWLALPERNVGAPELIEWLRVDAIAARYGIDAAALED
IQEWLAAAGARRGLAPVPPADSAIPVARHTFADALTRLFLGYAMPEGGQPVDAWLPVEGA
DGSDAELLGRLASFVDDVDAFARRCSDDMTPVEWTQLLLEVLGRCFDGGVDFADSLATVR
DAVDAMSEAMRAGAGDTPLPAAVVRTSLSEALDDPARGGVPWGSVTFSSLTSLRGLPFRI
VCMLGMDDGVLPSLARADEFDLMAEFGKAGDRQRRDDERNLFLDLLLAAQDRLLIAYTGR
SIRDNAPLPPAALVDELLDHLARVSSAEDASPAELDVARRAFIVEHPLQPFASDYFNAKS
GLFTYDTDRAELAALLAAPSREAPAPFFDAPLPAVPNEPVPFDDFQRFWRHPARALLRDR
LGIVLSDAQGELLDMEPFELDFAGRDALAERLLPALLDTGFDSEAFERVQRVAEASPELP
GGATGAVWRTRELSALRGLADRVRREVASGVTRLPFSLDIHARWPDTGDIALFGPYETAL
RKTSEGPLQLQGTLNLLTPTGQVVFRYARPTARDYLSAWLSHLVYCAALPDGPRRTVWHA
SGESFELGPVEKPLDQLAPLAALFSAGRAFPLRFFPKSAWAKVSDGDSAAQGAWISERVR
GESDDAALRIAFRGAPLTLDEPFGTLAAIVFKPLVAHLRSAS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcttttctattcgaaccggtacgatgtgctcgtcggcgcgctgctcgacgga
ctaggtgccacgccttccagtccgtggacggcgcaacctgtgatcgtgccgagcgcggcc
gtgcggcggcggctggaactcgatatcgccgcgcgtcaaggcgtgtgcgccaacattcag
ttcagttaccttgcccaatggctgtggacgcagatcggcggcgtcatcaaagacgtgccg
aagagttcgcctttctcgccggaccggctcgtgtggcgctgctaccgtctgctcggcgat
gccgatgaagcgcggccgtggaacgcgtcgccgcgtctgcgcagttacctcgatgctgcc
gatgcgccgatgcgctatgagctcgcgcgccgtgtcgcaacggtgctcgaccactatctg
acctatcgtcccgaatggctgttgcaatggcagaagggcggttcgatcttcgcaagcggc
gcagcggacgactccggcccgcgcctgacgggcgcgagcgccgcggcgcgagaggacgag
cgctggcagggcgcgttgtggcgcacgctgctcggcgaggtcgcaggcgacgcgcattcc
gcggacgccgccacgccgcctgcctatcgctttctcgacgaagtgcgctcgctcgatctc
gacgcgatcgcgcgagccgagtggcccgagtccgtcagcgtgttcgcgctgccgaccatg
ccgcctttgcatatcgcgttgctgcgcgagctgtcgcgctggatcgatgtgcgtgtgtac
gcgatgaacccgtgccgcgagttctggttcgacatcgtcagcgtggggcgcgtcgaagcg
ctcgatgcggcgggccagctcgactatcaggaagtcggccatccgctgctcgccgaatgg
gcacgccagacgcaggcgcagcttcacatgctgcacgagctgacggaaagcgcggcctcg
gccgaggcctcgtacttcgccgaaaacgccgcgccgacatggctcgccgccgtgcagaac
ggcatgctcgatctgcgcgacgagcgcgatctcgacgcgcagcccgaagaacgcggcatc
gaagtgcatgtgtgccatagcctcgcgcgccagctcgaagtgctgcacgaccgcctgctg
ggctggttcgacgagttcgacgatctgcagccttccgatgtgctcgtcacgttgcctgat
ctcggcgcggccggcccgctgatcgacgccgtgttcggcaccgcgccctcgggcgacacg
cgccgcattccgtatcgcattaccggtttgccgccttcgcaggcgaatcccgtggcgcgc
gtgctgctcgactggctcgcgttgcccgagcgcaatgtcggcgcgccggagttgatcgaa
tggctgcgtgtcgacgcgatcgccgcgcgctacggcatcgacgcggcggcgctcgaagac
attcaggaatggctcgcggcagccggtgcgcggcgcggtctcgcacccgtgccgcccgcc
gacagcgcgatacccgtcgcgcgccacaccttcgccgatgcgctcacgcgcctctttctc
ggctacgcgatgcccgaaggcggtcagccggtagatgcatggctgcccgtcgaaggcgct
gacggctcggatgcggaactgctcgggcgcctcgcgagcttcgtcgacgatgtcgatgcg
ttcgcgcgtcgttgctctgacgacatgacgcccgtcgaatggacgcaattgctgctcgaa
gtgctgggccgctgtttcgacggaggcgtcgacttcgcggacagcctggccaccgtgcgc
gacgccgtcgatgccatgagcgaagccatgcgcgcgggcgcgggcgacactccattgcca
gcggccgtggtgcgtacgtcgctgtccgaagcgctcgacgacccggcgcgcggcggcgtg
ccgtggggcagcgtcacgttctcgtcgctgacgagcctgcgtggcttgccgttcagaatc
gtctgcatgctcggcatggacgacggcgtgctgccgagcctcgcgcgcgccgacgagttc
gatctgatggcggagttcggcaaggcgggcgaccgccagcggcgcgacgacgagcgcaat
ctgttcctcgatctgctgcttgccgcgcaagaccgtctgctgatcgcgtacacggggcgc
agcatccgcgacaacgcgccgttgccgcctgccgcgcttgtcgacgaactgctcgatcac
ctcgcgcgtgtttcatccgcggaggatgcgtcgcctgccgagctggacgtggcacggcgc
gcattcatcgtcgagcatccgttgcagccgtttgcttccgattacttcaacgcgaagagc
ggcctgttcacgtacgacaccgaccgcgcggaactggccgcgttgctcgccgcgccgtca
cgcgaggcgcccgcgccattcttcgatgcgccgctgcccgctgtgccgaacgagcctgtg
cccttcgacgacttccagcgcttctggcggcatcccgcgcgtgcattgctgcgcgaccgg
cttggcatcgtgctttccgatgcacagggcgagcttctcgatatggagccgttcgaactc
gacttcgcgggccgcgatgcattggccgagcgtctgctgcctgcgctgctcgatacgggc
ttcgacagcgaagccttcgagcgcgtgcagcgcgtcgcggaagcgagccccgagttgccg
ggcggcgcgacgggcgcggtatggcgtacgcgcgagctatcggcgttgcgcggccttgcc
gaccgcgtgcggcgcgaagtggcgtcgggcgtcacgcgcctgccgttttcgctcgacatc
cacgcgcgctggcccgacaccggcgacatcgcgctctttggcccttacgaaacggcgttg
cgcaaaacatcggaaggtccattgcaactgcaaggcacgctcaatctgctgacgccgacg
gggcaggtcgtgttccgttacgcgcggcccacggcgcgcgattatctgtccgcgtggctg
tcgcatctcgtctattgcgcggcgctgcccgacggtccgcgtcgcacggtatggcatgcg
agcggcgagtcgttcgagcttgggcctgttgaaaagcctttggatcaactggcgccgctt
gccgcgttgttcagcgcagggcgcgcgtttccgctgcgctttttcccgaagagcgcatgg
gcgaaggtcagtgacggcgattccgccgcgcaaggcgcgtggatcagcgagcgcgtgcgg
ggcgagtccgatgacgccgcgttacgcatcgcgtttcgcggcgcgccgctaacgctcgac
gaaccgttcggcacactggccgcgatcgttttcaagccgctggtcgcacatctgaggagc
gcatcatga
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