KEGG   Pediculus humanus corporis (human body louse): Phum_PHUM462590
Entry
Phum_PHUM462590   CDS       T01223                                 
Name
(RefSeq) Small nuclear ribonucleoprotein-associated protein B, putative
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
phu  Pediculus humanus corporis (human body louse)
Pathway
phu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Phum_PHUM462590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phu03019]
    Phum_PHUM462590
   03041 Spliceosome [BR:phu03041]
    Phum_PHUM462590
   03032 DNA replication proteins [BR:phu03032]
    Phum_PHUM462590
Messenger RNA biogenesis [BR:phu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     Phum_PHUM462590
Spliceosome [BR:phu03041]
 Complex A
  U1 snRNP components
   Sm proteins
    Phum_PHUM462590
  U2 snRNP components
    Phum_PHUM462590
 Complex B
  U1 snRNP components
    Phum_PHUM462590
  U4/U6.U5 tri-snRNP components
    Phum_PHUM462590
 Complex C
  U2 snRNP components
    Phum_PHUM462590
DNA replication proteins [BR:phu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     Phum_PHUM462590
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 8238456
NCBI-ProteinID: XP_002430089
VectorBase: PHUM462590
UniProt: E0VVE5
LinkDB
AA seq 187 aa
MLQHINYRIRITLQDSRTFIGTFKAFDKHMNLILGDCEEFRRTKPKNSKEAERDEKRSLG
FVLLRGQNIVSLTVEGPPPPEEGLPRVPIPGAGPGPGIGKAAGRGLPMGQIIPAGLQGPV
RGVGGPSQQVMTPGQGQMAAPPHLRPPGPGPVRGPPGPMMGPPPGMMGMAPGIGRGGPPI
GHPPPRY
NT seq 564 nt   +upstreamnt  +downstreamnt
atgttacagcacataaattatagaatccgtatcacacttcaggattcaagaacatttata
ggaacttttaaagcttttgacaaacatatgaatcttatacttggagattgtgaagaattt
cgtaggaccaaaccaaaaaattctaaagaagcagaaagagatgaaaaaaggtcattagga
tttgtactattaagaggtcaaaatatagtatcattaacagtagaaggacccccacctcct
gaagaaggtttacctagagttcctataccaggtgccggaccaggacctggtattggcaaa
gcagcaggaagaggtttaccaatgggacagattattccagcaggattacaaggacctgtt
agaggggttggtgggccatcacaacaagtaatgacacctggtcagggtcaaatggcagct
cctccacatttacgaccaccgggtcctggtccagttcgtggcccccctggtccaatgatg
ggacctccacctggaatgatgggcatggcaccaggcattggaagaggaggaccaccaatt
gggcatccacctcctagatattaa

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