Peptacetobacter hiranonis: KGNDJEFE_00351
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Entry
KGNDJEFE_00351 CDS
T06633
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
phx
Peptacetobacter hiranonis
Pathway
phx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KGNDJEFE_00351 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phx03400
]
KGNDJEFE_00351 (recD2)
Enzymes [BR:
phx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KGNDJEFE_00351 (recD2)
DNA repair and recombination proteins [BR:
phx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KGNDJEFE_00351 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
HHH_2
PIF1
UvrD-helicase
SLFN-g3_helicase
HHH
DEAD
T2SSE
AAA_22
nSTAND3
Herpes_Helicase
SRP54
ATPase_2
RsgA_GTPase
TrwB_AAD_bind
PhoH
AAA
Thymidylate_kin
cobW
Ribosomal_S13
ABC_tran
AAA_16
Mnd1
AAA_24
AAA_28
5_3_exonuc
ATP-synt_ab
AAA_14
MeaB
Zeta_toxin
AAA_12
CbiA
KTI12
AAA_29
NTPase_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEK19874
LinkDB
All DBs
Position
286878..289097
Genome browser
AA seq
739 aa
AA seq
DB search
MERIEGLITDIVFQNEDNGYTIAKLTNEDGEISVVGCMPTLSVGETVEVEGKWGRHKVYG
NQFEVSTFVPVTPTSIEGIRVYLASGMIKGIGEKMANKIIDKFGVDTLDVIQNAPERLQE
IDGIGKKKVAQIVESYEEDRELRKIILELAPFGITPNLCLKIYKKYNNRAMKLIKSNPYR
LAEDIRGIGFKIADNLAQKIGIERDSKDRICQGIIYVLKKALGEGHTFLPEKEVEKEAVK
LLGVEIDKIDNCLLDLAYAQKIKLDKVGDFLLVYLMNYYLAENGVCKKLIELATFDFKKE
KKIDVDAEIEAVEKAEGIKLANRQREAVTEALQSGVSVITGGPGTGKTTTINTIIKIFKR
QKKEVVLAAPTGRAAKRMSETSNEEAKTIHRLLEMGYSTDDDLVFFKNEDEPIKADVIIV
DEASMIDILLMFSLVNAIKPGTRFIIVGDSDQLPSVGAGNVLRDIIDSQVIKVVRLDEIF
RQAQESMIIVNAHKINNGEAPYLNAKNKDFFFLNAATNEEIMNTIIGLVETRLPKFYKVD
PLEDIQILSPMRKGDIGVTNMNIILQRYLNPPSERKVEVTLNKRIFRIGDKVMQIKNNYT
KSWKNEDETENGEGIYNGDIGYIYYIDKNKKIIYVMFEGSRIVEYNFEELDELDHSFCTT
IHKSQGSEFPVVVIPIAWAPPMLLSRNLLYTAITRAKKLVVLVGDVRYLKQMIQNNRVNA
RYSNLALKLNRIKREGVLV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagagaatagagggattaataacagatatagtatttcaaaatgaggacaatggatat
acaatagcaaaacttacaaatgaggacggagagatttctgtagtaggatgtatgcctact
ctttctgtaggtgaaactgttgaagttgaaggaaaatggggaagacataaggtatatggg
aatcagtttgaagtaagtaccttcgtgcctgttacaccgacatctattgaaggtattagg
gtatacctagcatctggaatgattaaaggtataggtgaaaaaatggccaataaaataatt
gataaatttggtgtagatacgttggatgttatacaaaatgctccagaaagacttcaggaa
atagatggtataggaaagaaaaaagttgctcagattgtagaaagctatgaagaggataga
gaacttagaaaaataattcttgaattagctccatttggaataactccaaacctatgttta
aagatatataaaaaatacaataatagagccatgaagctaataaagtcaaatccatataga
cttgccgaggatattagaggaataggatttaaaatagctgataacctagctcaaaagata
ggtatagaaagagattctaaggatagaatttgtcagggaataatatatgtcttaaaaaag
gctcttggagaaggacatacatttcttccagaaaaagaagtagaaaaagaggcagtaaaa
cttttaggagttgaaattgataagatagataattgtctactagatttggcatatgctcaa
aagattaagctagacaaagttggagattttctgcttgtataccttatgaattattactta
gcagaaaatggtgtgtgcaagaagcttatagagcttgcaacttttgattttaagaaagaa
aagaaaatcgacgtagatgctgaaatagaggctgtagaaaaggctgaaggtataaagcta
gctaataggcagagagaggctgttacagaggctctacagagcggtgtaagtgttatcaca
ggtggaccaggtacaggtaaaacaactaccataaatactataataaagatatttaagcgt
caaaagaaggaagtagtacttgcagcgccaacaggacgtgcagctaaaagaatgagtgaa
acgtctaatgaagaagctaagacaatacacagactccttgaaatgggatactctacagat
gacgatttagtattttttaaaaatgaggacgagccaatcaaggcagatgtaataatagtc
gatgaagcgtcaatgatagatattttacttatgtttagtctagtaaatgcaataaaacca
ggtactagatttataatagtaggagatagtgaccagcttccatcagtaggcgcaggaaat
gttcttagagatataatagattctcaagttattaaagttgtaagacttgacgagatattt
agacaggctcaggaaagtatgataatagtcaatgcacataagataaataatggagaagca
ccatatctaaatgcaaaaaataaggacttcttctttttaaatgcagctacaaatgaagaa
ataatgaacactataatagggcttgtagaaacaagattgcctaagttctacaaagtagat
ccattagaggatatacagattttaagccctatgagaaaaggtgatataggtgttacaaat
atgaatataattctacagagatacctaaatccaccatcagaaagaaaggtcgaagttact
ctaaataaaaggatatttagaattggcgataaagtaatgcagataaaaaataactacaca
aagagctggaaaaatgaggacgaaacagagaacggcgaaggtatatataatggagatatt
ggatatatttactatatagacaagaataaaaaaattatctacgttatgtttgaaggctca
agaatagttgaatataattttgaagaacttgacgaactagaccacagtttctgtacaaca
atacacaaaagtcaggggagtgaattccctgtggtagtaataccaatagcatgggcgcca
cctatgctattatcgagaaacctactttatacagctataactagggcaaaaaaattagtt
gtactagttggagatgttagatatttaaaacagatgattcaaaataatagagtgaatgct
agatattcaaacctagctctcaaacttaaccggataaaaagagaaggagtgctagtatag
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