Pseudomonas hygromyciniae: JTY93_06500
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Entry
JTY93_06500 CDS
T09404
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JTY93_06500 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyg03400
]
JTY93_06500 (ung)
Enzymes [BR:
phyg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JTY93_06500 (ung)
DNA repair and recombination proteins [BR:
phyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JTY93_06500 (ung)
Prokaryotic type
JTY93_06500 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QSB42246
LinkDB
All DBs
Position
1485624..1486319
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AA seq
231 aa
AA seq
DB search
MMTSDDRIKLEPSWKHALREEFEQPYMNELREFLRQEHAAGKEIYPPGPLIFNALNSTPL
DKVKVVILGQDPYHGPGQAHGLCFSVQPGVPTPPSLLNIYKELKRDLNIDIPNHGCLQSW
ADQGVLLLNTTMTVERATANAHAGKGWQFFTDRVIEVVSEHQPHLVFLLWGAHAQGKQKL
IDATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGETPIEWRLPPI
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ctgatgacttccgacgaccgtatcaaactcgaaccgagctggaaacacgccttgcgcgag
gagttcgagcagccctacatgaacgagttgcgcgagttcctgcgccaggagcatgcggca
ggcaaagagatctacccgccgggcccgctgatcttcaatgcgctcaactccacgccgctg
gacaaggtcaaggtggtgatcctcggccaggacccctaccacggcccgggccaggcccat
ggcctgtgcttctcggtgcagccgggcgtgccgacgccgccgtcgctgctcaacatctat
aaagagctcaagcgcgacctcaatatcgacattcccaaccatggctgcctgcaaagctgg
gccgaccagggcgtgttgctgctcaacaccaccatgaccgtggagcgtgcgacggccaac
gcccatgcgggcaagggctggcagttcttcactgaccgggtgatcgaggtggtcagcgag
catcagccgcacctggtgttcctgctgtggggcgcccatgcccagggcaagcagaagctg
attgatgcgaccaagcatttggtgctgacttcggtgcatccgtcgccattgtcggcgtat
cgcgggtttttgggttgcgggcatttcagccggacgaacaagtttcttgagcagaatggc
gagacgccgatcgagtggcggttgccgcccatctaa
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