Pangasianodon hypophthalmus (striped catfish): 113524122
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Entry
113524122 CDS
T05759
Name
(RefSeq) uncharacterized protein LOC113524122 isoform X1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SecA_DEAD
P-loop_SecA
Helicase_C
Motif
Other DBs
NCBI-GeneID:
113524122
NCBI-ProteinID:
XP_026766053
LinkDB
All DBs
Position
Unknown
AA seq
2329 aa
AA seq
DB search
MGFLGGEITVDNRTPYRWTVCIETQKPWLFSDRYNTFNVGPHTKTQQSQILLIKWGQTIY
LKVKYGQCSETECCTDPDLWYIFDPRDDPCFTIRESGDHWYIHLDCNINYEEKESTCPNY
ERTEDDAREEEENRRRAEEQRRQAQLERERRIEEQIRRESELAAKKLEQATETLKQKQRL
RGHEFHHQTHIMQQTPNTENERDEVPEIEKKFRELSLEYQILQDEDSEETLADRMKTLQN
ELMVEYCKKRNLTSSCVFSFDTAVGYETLPLHDRLTVLEAVMHLVFEENEDDHTHKHDRD
FLLDVLELLQDDHPSLAFNLLQSLLQTDMQLSAQSKEILCQIAFNNTWKLAEITDFMRYI
FRKDKEQVQSILHIAQTYKLEYRDVFIALESPDPLRWLKSYVDKERHKNALTIISEMRKA
NYPENVLIILEDVLGYLEMELPKHKTADLNENEIQNVKKMVKELDFNNPDRHVLKSVLVG
MSVAVKICSAVTIQRGKKEIVIEGYLPRLPQLAALVVFLLPKSETNTGCLLEIGTGEGKS
CILAMLAAIHAIRGVKVDIVTSSPVLACRDLEEWSGLYNMFGITSSAVPPMLNDVSSEKL
EELTQEAYKQQIIYSTVGTFAADTLKQEFEKKTTRGDRRFELVLVDEVDYMTLDNGVQIT
FLSHESSGLQHLEQVLAGIWAMVSARRPMEVEETGETMWATRVQNFHTAALIAMIGSDET
DTFSPLEILLPGTELGFYSEEDFENLQASFNDKGEKQHVAMENKAWKAIMAKTGIEQQYD
LLSVLEMGMEHKVAFNCYVYQSETRKAIRFGEQKTKTDQNINMLLCENGKACEILSENLL
VEATLSQVKSKIKYSKQCSSEEEKHNLVVPSFLEKYLENQLPVFVENALKAIQMTKGREY
MIERSLSAQGIDVSEEDQHMYHAIIPVDFQASGMLEKRKRWGDGLQQFLEMKHQLTLSPL
SNVTNYMSNSNFFKRYLSGKGIFGVSGTLGGDADKGFLARHYKTDSYVIPAHQRQKVTEL
PAVQVKGGTEQWIQTLCATVSKVSNRGQVVLVVCEDVNTANELNDKITAETKHSVTKYTM
SESHNIENQEFNKGQIIITTNLGGRGTDIKVTEEVNRCGGLFVLLTYFPNNRRVEKQVFG
RTGRKGTPGMVQLILNHDRLAMAYRGHSIEVMRELREEYEVNRIKDMEKEKLAEIEMKEE
LFSTFCQFLSDFDKHYNTEEKTDLFEVKVKDVPRYFESFHSKVDYHPALNALKESWGIWL
ILHTEQINIENDLTELKVDLIYHLHDTSNKLLQGQSENFYDHIQQALGRTALHFQNKNKC
DYGAKSYWKKASESDNYYRAIALYNQAYITINMAKEGYKSEAHSILEEAEKAIDVYVSEM
TKTLYFCSLSVTQDFEPHHSGSCNFQIQMQARMNIFNSWKRNIRKILDMLGPGKGEFKTV
DLTLYSLSAEEDFVSSSELNLFRNYGLAVVFEVKKKPQFSFDALICCFLGLVQVVAGVLI
CGLTAGSMSSFGLGLISEGVSDMISGVMGMINGDFNWASWAISKAISIGTSLVCGGFSVL
KRSFSSVKNAANSIFNGTKSLKNIAWSAIRSGRNLFMSTCTTVKSLASSVSIKNITLNAA
KLNLKKASAYAVQELAIQGVNTALNNIDATVKKTFKQGFQLTFKKSLCSELQQNKQFVST
LLDFISSRIPKAALNKESGYKISKNLEKQMIDHVALNTKLTISALIINCNHIQKTIQTLS
SVWDMSAEFVAYKPYTCIKRLLRTASMSTTIYEMYSSIPTKQTINSNFVPAFLKSIKEDP
LFEKYDSDGRDKLEDVERLKNELIDLVSEVLSQTMVESFSGFATSIFTKTFTQRLNSVTV
EVVGNLLGRHETQRFFVSQQHHYDLKSATECKKRSLTDEELNELTCYAKDIADEQKPATA
LEVHVLTKSNLLEGKGICITVIDDKGKLLTEETYPGTDPAAGAIKLVLTKLPLTSPGNEG
ILNKLKRNIKAEDIPQSGHIDIIRPDGSRETVKSSNQNCLFHAVIQATTNDPNNVVLQKA
KELRRKVSDEILLKPNNYVDAVKIQNIFNMTNSSNKYKIQAGVRECDLEQYTKYTKNKTP
KQIIEEYKLGKVGDHKCVLDMEKPTAGLVEAQHIPPKSTWTSVLHLIKTNPEISSSLDRK
NKEAFYLMMKMKHDPNGKMQLCMNTLSSDRRRALSSGNSAESRACRHFLTSTFSRGDTEK
ALKLSLIMAHPQCSDHIWNDLGFHRHFRTCDAGLAVMDRNDYYKRGFKEIVKKYSKWDLI
DQDQTIRLIKWVQKDIFLDTSTVEYKEIINVIKDAKNKKKRRDMSMDKL
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgggaggagaaataactgttgacaatcgcacaccctacagatggactgtc
tgtatcgagacccagaagccatggctgttttctgacagatacaatacgtttaatgttgga
cctcacacaaaaacacagcaaagccagatacttttaatcaaatggggccaaaccatctac
ctgaaagtgaaatatggacagtgttcagagacagagtgctgcacagatccagatttgtgg
tacatattcgatccaagagatgacccctgtttcacaattcgagagagtggagaccactgg
tatatacatctggactgcaacataaattatgaggagaaggaatcaacttgcccaaattat
gagagaactgaagatgatgcacgagaggaagaggaaaatcgtagacgagcggaggagcag
cggcgtcaggcccagcttgaacgtgaaagaagaattgaggaacagattagaagagaaagc
gagctcgccgctaagaagcttgaacaagccacagagacactgaagcagaaacagaggctg
agaggccatgagttccaccaccaaactcatataatgcaacagacaccaaacactgaaaat
gaaagagatgaggttccagaaatagagaagaaattcagagaactctcattagaatatcaa
atccttcaggatgaagattcagaggagacactagcagacagaatgaaaactctgcaaaat
gagttaatggtggagtactgtaagaaacgcaacctgaccagtagctgtgtgttttctttc
gacactgcagttggttatgagactctgcctctacatgatagactgacagtacttgaagca
gtaatgcatttagtttttgaggagaatgaggacgaccacacacataaacatgaccgagac
ttcctcttggatgtgcttgaactgttgcaagatgatcatccatcacttgcgtttaatctt
ttacagagccttcttcaaactgatatgcaactatctgcacagagtaaagaaattctgtgt
cagattgcattcaacaacacatggaaactggcagaaataacagatttcatgcgttacatt
ttcaggaaagacaaagaacaagtgcagtcaatacttcacattgcacagacctacaagctg
gaatatagggatgtctttattgctttggagtcacctgatcccctcagatggttaaaaagc
tatgttgacaaagagagacacaaaaatgctcttactattattagtgaaatgcgcaaagca
aactaccctgagaatgtcctgataatactcgaggatgttctggggtatctggaaatggag
cttccaaaacacaaaacagctgatctcaatgaaaatgaaatccagaatgtaaagaaaatg
gttaaagaactggattttaacaacccagacagacacgttctgaaaagtgtactagtggga
atgtcagtcgcagtaaaaatatgctctgctgtcactattcaaagaggtaaaaaggaaata
gtcattgaaggatatcttcccagattacctcaacttgcagccttggttgttttcctgctt
ccgaaatcagaaactaatacaggttgtctcctggaaattgggactggtgaagggaaatct
tgtatcttagccatgcttgctgcaatccatgccattcgtggtgtaaaggtggacattgtg
acgagctccccggtcctcgcctgtcgtgatttagaggaatggagcggactgtacaacatg
tttggcataacatcatctgccgttcctccaatgctgaatgatgtctcatctgaaaaacta
gaagaactgactcaggaagcatacaaacaacaaataatttacagtactgttgggactttt
gcagcagatacactgaaacaagagtttgagaagaaaacaactcgaggagacaggaggttt
gagctggtgcttgtggacgaggttgactacatgaccttggataatggagttcaaataaca
tttctgtcccatgagtccagtggcctccagcatttggaacaagtccttgcaggaatctgg
gccatggtatctgcacgtcgaccaatggaggtagaagaaactggagagaccatgtgggca
acaagagtccagaattttcacacagctgcactaatagcaatgattggttcagatgaaaca
gatacattttcaccactggaaattttgttgccaggcaccgaattaggcttttactcagag
gaagattttgaaaatttgcaggcctcttttaatgacaaaggagaaaagcaacatgttgct
atggaaaataaggcatggaaggccatcatggccaaaactggaatagaacaacagtatgac
ctgctcagtgttcttgagatggggatggagcacaaggtggcatttaactgttatgtatat
cagtcagaaactagaaaagccattcggtttggagagcaaaagacaaaaactgaccaaaac
atcaacatgctgctatgcgagaatggtaaagcttgtgagatcttgtctgaaaatttgctt
gttgaagccactcttagccaggtgaaatccaagattaaatattctaaacaatgcagttca
gaagaagaaaaacacaatcttgtagtcccttctttcttagagaaatacctggaaaatcag
cttccagtgtttgttgagaatgcactgaaggccattcagatgaccaaaggcagagagtac
atgatcgagagatctcttagtgctcagggaatagatgttagtgaagaagatcaacacatg
taccatgcaataattccagtggactttcaggccagtggaatgttggagaaaagaaaacgg
tggggtgatggactacaacaatttctggagatgaagcatcagttaactttatcgccatta
tcaaatgtgacaaactacatgtcaaattcaaatttctttaaaagatatctcagtgggaaa
ggaatatttggtgtttctggaacactggggggagatgcagacaagggtttcctggcaagg
cattacaaaacagacagctacgtcataccggctcatcagcgtcaaaaggttactgagctt
cctgcagtccaggtgaagggaggtaccgaacaatggatccaaactctttgtgccacggtc
tcaaaagtctccaacagaggacaagtggtgttagtcgtgtgtgaggacgtgaacacagca
aatgagctcaatgacaaaattacagcagaaaccaaacattcagtcaccaagtacacgatg
agcgagagccacaacattgagaaccaggagttcaacaagggacagatcattattaccact
aaccttggaggccgtggaacagacattaaggttacagaggaggttaatcgctgtggtggt
ctctttgtgttactcacgtactttcccaataaccgaagagtcgagaaacaggtttttgga
cgaacaggtcgaaaaggcacgccgggaatggtccagctaatactgaaccatgatcgtcta
gccatggcctaccgaggccattctatcgaagtcatgagggaactcagagaagagtatgag
gttaatcgaataaaagatatggagaaggagaaactagctgaaattgaaatgaaggaagaa
ctgttctccacattttgtcagttccttagtgactttgacaagcactataatacagaagag
aagacagacctctttgaagtgaaagtaaaagatgtccctcgttactttgagtcctttcac
agtaaggtggactatcacccagcactgaatgctttgaaggaatcatggggtatatggctg
atacttcacacagaacagattaacatagagaatgacctcactgaattgaaagtagacctc
atctatcacttgcatgatacaagtaacaaacttttacaaggtcagagtgaaaacttttat
gatcacatccagcaggctttaggaagaactgccttgcactttcaaaacaaaaacaaatgt
gactatggagcaaaatcttactggaaaaaagcctctgagtcagacaactactacagagct
attgcactgtataaccaggcctacattaccattaacatggccaaagagggctacaaaagt
gaggcacattccatactcgaggaggcagagaaggccatagatgtttacgtatcagaaatg
accaaaacactatacttctgttccttgtctgttactcaagattttgaaccacaccacagc
ggcagctgtaacttccaaatacaaatgcaggcaaggatgaacatatttaactcatggaag
cgaaatatcagaaaaatacttgacatgcttggaccgggcaaaggagagttcaaaactgtg
gacttgacactttacagcttatcagctgaggaagattttgtgtcttctagtgaactcaac
ctctttcgtaattatgggcttgcagttgtgtttgaagtgaagaaaaagccccaattctca
tttgatgccctgatttgttgttttcttggtctggttcaggttgtagcaggagttctgata
tgtggcctgacagctggttctatgtcctcatttggtcttggtttgatctctgaaggtgtg
tctgacatgatcagtggagtcatgggtatgataaatggtgattttaattgggcatcatgg
gcaatatctaaggcaattagtataggaacttctttggtctgtgggggattcagtgttctc
aaacggtcattctcctctgtgaaaaatgcagcaaatagtatcttcaatggcactaaatca
ctaaaaaatattgcatggagtgccatccgatcaggaagaaacctgtttatgtccacatgt
acaacagtcaaatcattagcatcatcagtatccataaagaacatcacattgaatgcggcc
aaactgaacttaaaaaaagcaagtgcgtatgctgttcaggaattggctattcagggggta
aacactgctctgaacaacattgatgccacagttaaaaaaactttcaaacaaggatttcaa
cttacttttaagaaatctctctgttcagaactgcaacagaataaacaatttgttagcacg
ctcttagatttcattagctcaagaatcccaaaggcggccttgaataaagagtctggctac
aagattagtaaaaacttggagaagcaaatgattgaccatgttgctctgaatacgaaactt
actatcagtgcccttataataaactgcaaccatatccaaaagaccattcaaacactgtcc
agtgtgtgggacatgtcagcagagtttgttgcatacaaaccttatacctgcatcaagaga
ctactgagaactgcaagcatgtccaccaccatttatgaaatgtattcctccattcctaca
aaacagaccattaacagtaattttgttcctgcatttttgaagtccataaaggaggatcca
ttatttgagaagtatgacagtgatggaagggacaaactggaagatgtggaacgtcttaaa
aatgaactcattgatttagtttcagaagttctttcccaaaccatggtggagagtttttct
gggtttgccacatcaatttttaccaaaacattcactcaaagactgaactctgttactgta
gaagtggttggtaatttgctgggaaggcacgaaacccaaaggttctttgtgagtcagcag
catcattatgatctgaaatcagccactgaatgcaagaaaagatctttgactgacgaagaa
ctaaatgagctcacatgctatgctaaagatatagctgacgaacaaaagccagcaacagct
ttagaggttcatgttctcacaaagagtaacttactggaaggaaaaggaatttgtataact
gtaatagatgataaaggaaaacttctcacagaggagacttacccaggaactgatccagca
gctggtgctatcaaactcgtgctgacgaaactacctctgacttctccaggaaatgaagga
atattgaataaactgaaacgtaacattaaggctgaagatattccacagagtggccacatt
gatattatacgccctgatggatcacgagaaactgtaaagtcctcaaatcagaactgtctt
tttcatgctgtcatccaagcaacaactaacgacccaaacaacgtcgttctacaaaaagcc
aaagagctccgtaggaaagtcagtgatgagattcttttaaaaccaaacaactatgtagat
gctgtgaagatccagaacattttcaacatgacaaacagctcgaataaatataaaatccaa
gctggagtgagggaatgtgatctggagcagtacaccaagtacactaaaaacaagacaccc
aaacaaatcattgaggagtacaaacttggaaaagtgggcgaccacaagtgcgttttagac
atggagaagcccacagcaggactggtggaggcacagcacattccaccaaaaagcacatgg
acttcagtccttcacctcatcaaaacaaaccccgagatttcatcttcattagacagaaaa
aacaaggaagctttctacttaatgatgaaaatgaaacatgacccgaatggaaaaatgcag
ctttgcatgaacacgctgtcgtctgatcgccgccgtgcactgagcagcggcaacagcgcc
gaatccagagcatgcagacacttcctgacaagcaccttttcacgtggagatacagagaaa
gcgttgaagctctccttaatcatggcccatcctcaatgctcggaccacatctggaatgat
ctcggtttccatcgtcatttcaggacatgtgacgctggacttgcagtgatggacaggaac
gactactacaagagaggatttaaggaaatagtgaaaaagtacagcaaatgggatctcatc
gaccaagaccaaaccatccgactaataaagtgggtgcagaaagatatatttctggacaca
tctacagtggagtataaagaaataattaatgttataaaagatgcaaaaaataaaaaaaaa
agaagggacatgagcatggataaactctga
DBGET
integrated database retrieval system
