Pangasianodon hypophthalmus (striped catfish): 113524213
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Entry
113524213 CDS
T05759
Name
(RefSeq) tumor necrosis factor receptor superfamily member 27-like isoform X1
KO
K05163
tumor necrosis factor receptor superfamily member 27
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113524213
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
phyp04050
]
113524213
Cytokine receptors [BR:
phyp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
113524213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
Oxidored_q2
Abhydrolase_9_N
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
113524213
NCBI-ProteinID:
XP_026766165
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MDCAEDEFSLHGECRRCPRCPPGHELKQECGYGVGGASACGVCDRRWFKEDWGSHSCRMC
QNCRRLNRQEITPCTHTHNAVCGDCLPGFYSKRRLDGLQDLECLPCGSAHIRHTQCETKG
TTVQARSSEAPPLNAAAMMTACVTAVAMTTVLLIIMVMTYRGFNTLWKTFKGCLSPRSHR
DIAAASVSVAMEYSVTQEAEYGCLDFTPASLPAEHSALFSDVTSCGVVAQATGSHGGGSG
WAGHGPVECTEREILHGEKRTLMSDVSHVTENTSTSLQGACLRPELPPGADATANTANTA
NTANISNNANTANNER
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgcagaagacgagttttctcttcatggagaatgtaggaggtgtccacgctgc
cccccgggacacgaactgaagcaggagtgtgggtacggggtgggcggagccagtgcgtgt
ggagtgtgtgatcgacgctggtttaaggaggattggggctcacactcgtgcaggatgtgt
cagaactgccgccgccttaacagacaggaaatcacaccgtgcacacacacacacaacgcc
gtgtgtggagactgtctgcctggcttctacagtaaaaggcgattggacggactgcaggat
ttggagtgtttgccttgtggttccgcccacatcagacacacacagtgcgaaactaaaggt
accactgttcaagcacggagttctgaagctccgcccctcaacgctgctgctatgatgact
gcttgtgtgacggctgttgctatgacaacagttttattgatcattatggttatgacatac
agaggatttaacacactctggaaaacatttaaaggctgtttatcaccccgcagtcaccgt
gacattgcggctgcctccgtttccgtagcgatggagtacagtgtgacccaggaagcagaa
tatggttgtttggacttcactcccgcctcacttcctgcggaacacagcgccctcttcagt
gacgtcacttcctgtggggtcgtcgcccaggcgacggggtcacacggcggcgggtcgggg
tgggcggggcacggcccggtggagtgcacggagcgggagatattacacggagagaagagg
acgctgatgtctgatgtctcgcatgtaacagaaaacacgagcacgtctttacaaggagcc
tgtttacgtcccgaacttccaccaggagccgatgctacagctaatactgctaatactgct
aatactgctaatatctctaataatgctaatactgctaataatgaacgttaa
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