Pangasianodon hypophthalmus (striped catfish): 113525221
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Entry
113525221 CDS
T05759
Name
(RefSeq) probable crossover junction endonuclease EME2 isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03440
Homologous recombination
phyp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113525221
03460 Fanconi anemia pathway
113525221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113525221
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113525221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Tim54
AAA_11
RR_TM4-6
eIF-3_zeta
CAF-1_p150
PPP4R2
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
113525221
NCBI-ProteinID:
XP_026767493
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MRSEGEVDRCVYSAGKRTDNAPGDSAVITLTMAELKRAHTWEISDSEAEQEPGTAAEPDS
AHSRTQSAQSRLEPPPAPAVRSPSPGARRRGNRGEDREERERQKEERERERERQKEERER
QRERQKEERERRKEEKRQEQKRKKEAAERVKRLKPEEYLKTVTVNIHPALLQDSGCDVLL
STLAGLEWRSRIEEHDLTHTVSWSRTLPRTEDEDGSLVEEDQVLMVVTQMEFMDMIMSIK
QALIGGCEEANSLFQPLGEYLNRNTGAVVSLLVTGGQYCQRRGSYDDDDDEDELCPRSQL
GFQNIDIEQVLVYLQLYKNVTVHFLFGWQEVTDHVCAVTKALSKRPFRTLQDVPDLGFCV
DGLWAGGVRVDRSGRGLAQVWTRQIQQLNRVSVAMATAVTNAYPSPQLLLQAYEKAESEE
EQRGLLADLTVRGGAKERRIGPELSNRVHRLMTSQNPELVLD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtgagggggaggtggacaggtgtgtgtacagcgcaggtaaacgcactgataat
gcaccgggagactccgcggttattactctcacaatggcggagttaaagcgagctcacacc
tgggagatttccgactcggaggcggagcaggagcctggaactgccgcggagccggacagc
gcgcacagccgcacacagagcgcccagagccggctagagcctccacctgcccccgctgtc
cggagccccagccccggggcaaggaggagaggaaaccggggggaggacagagaggagaga
gagagacagaaggaggagagagagagggagagagagagacagaaggaggagagagagaga
cagagagagagacagaaggaggagagagagagacggaaggaggagaagagacaggagcag
aagaggaagaaagaggcagctgagagagtaaaaagactcaaacctgaggagtatttaaag
actgttactgtcaacatccacccagcgttgctgcaggactctggctgtgacgtgttgttg
agcacgctggctggtttggagtggaggagccgaatagaggagcacgacctcacacacacc
gtcagctggagcagaacactgcctcgtactgaggatgaagacggtagcctggttgaggaa
gatcaggtgctgatggtggtcactcagatggagttcatggacatgataatgtccatcaaa
caggctctgattggtggttgtgaggaggcgaattctctgtttcagcctctcggtgagtat
ctgaacagaaacacaggggcagtcgtctcactgctggtgaccggaggacagtactgtcaa
cgcagaggctcgtatgatgatgacgatgatgaagacgagttgtgtccacgttctcaactt
gggttccagaacattgacatagagcaggtgctggtgtacctgcagctgtacaagaatgtg
acagttcacttcctgtttggctggcaggaagtcacagatcatgtgtgtgctgttaccaag
gccttatctaaacgcccctttcgaacactgcaggacgttcctgatctgggtttctgtgtg
gacggcttgtgggcagggggagtgcgtgttgatcgtagtgggcggggcctcgctcaggtg
tggacacgacagatacagcagctcaaccgtgtcagcgtcgccatggcaacagctgtgaca
aatgcctacccctctcctcaactccttctgcaggcctatgagaaagcagaatcagaagaa
gagcagcgtggattattggccgatctcactgtgagaggcggggctaaagagaggcgcatc
ggacctgaactgtcaaatcgtgtgcaccggcttatgacttcccagaatcctgagctggtg
ctggactag
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