Pangasianodon hypophthalmus (striped catfish): 113526700
Help
Entry
113526700 CDS
T05759
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46 isoform X1
KO
K12590
exosome complex component RRP46
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113526700 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113526700 (exosc5)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113526700 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113526700
NCBI-ProteinID:
XP_026769787
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MKHAMMELEITSPVLREFGSEQSLLSKPDGSATFMQGDTSVLAGVYGPAEVKVNKEIYDR
ATLEVLIQPKAGMPSVRERTREQCVRETCEAALLSTLHPRSSLTLVLQVVHDDGSLLACC
LNAACMALMDAGLPMSRLFCGVTCAIDAESRIITDPTAQQEKESRALMTFAVDSKEHNVM
MSSTKGSFSVKEMQQCIAVSQKASERIFQFYRDSVKRRYSKIL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgccatgatggagctggagatcactagtccagttctgagggagtttggcagt
gaacagagtttattatccaaacctgacggttcagccacgtttatgcaaggagacaccagt
gtgttggcaggagtgtatggaccagctgaggttaaggtgaacaaggagatctatgatcga
gcaactctggaggttctgatccagcccaaagctggcatgccgagtgtccgtgagcgcacg
agagagcagtgtgtgcgggagacgtgtgaggccgctctgctgtccacgcttcatcctcgc
tcctccctcacactcgtcctgcaagtggtgcacgatgacggatcgttgttagcgtgctgt
ctgaatgctgcgtgcatggcgctgatggacgccgggctgcccatgagccgcctgttctgc
ggcgtcacgtgtgccatcgacgccgagagccgaatcatcacagaccccacggctcagcag
gagaaggaaagtcgagcgctaatgacttttgcagtcgacagtaaagagcacaatgtcatg
atgtcatcaacaaaaggttctttctcagtgaaagagatgcagcagtgtatagcggtcagc
cagaaggcgtctgagcggatcttccagttttacagggattctgtgaagcgacgatactcc
aaaatattatga
DBGET
integrated database retrieval system
