Pangasianodon hypophthalmus (striped catfish): 113526809
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Entry
113526809 CDS
T05759
Symbol
ltbp4
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113526809 (ltbp4)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
113526809 (ltbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
113526809
NCBI-ProteinID:
XP_026769973
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MFRTLIVLLCCVSALLHVSPAAERIKVLFTPTICRLRCSNGHCSNYCERGNITTLYSNED
ATHTSGFRVFLCPMLCKNGGVCIQKDRCLCPSNFTGKFCHIPASSSSPSANEVEKPSRGN
FPASQGMMHSEYVLPLQSRQQNQTNGSPMVTVRVRHPLEATVKIHQVAKVTSGSGLETVW
RSSGVSGSLGSRGHSSAILADRAEATPALVQAQTFRGDSIYTEVSGFKYCFREVRNGQCS
SPLPGLRSQETCCKGDGLAWGIKECTLCPPVSGSGTSGEKSCPKGFERVNGTQCVDINEC
LQPGFCENGKCVNTRGSYSCVCKPGFLLDASHGICISQKVISEEKDQCFRIVSQGSCSLP
ILKNITKQICCCSRVGKAWGRKCEACPYFGSVEFKEICPAGPGYHYSPNTLKLNQRVTEP
RNPALVSQTNRTLTTVTRYDTSLLQSTTRNEPPQNQRPTRPQSATITHNVRIQQSSAGQK
QPITSEVFIIQNEPQLSQHRQTGGPASPTSQPSRELPHKRVCEANPQVCGPGRCVDIPGG
KHTCACNPGFILNSQAGHCQDINECLLNPRPCLSGQCENTVGSFRCVCPPGYRSDAQQNR
CTDIDECRLIPNRCTNGRCENTLGSFRCVCRTGYKFQNNTCTDIDECDDPLRCPGKECIN
TQGSYNCVPCKPGFGLLNGQCTDIDECRQRSSLCSNGRCENTPGSYRCVCNKGFKLQGSI
CTDVNECEDSLQCPGQECINTLGSYRCVSCGPGFAITNRRCTDIDECRQVPAPCANGRCE
NAPGSYRCVCHTGYKLQDNTCKDINECENHLQCRGQVCVNTPGSYRCTSCRAGFSFHNGQ
CTDVDECAQNTRLCANGRCENTPGSFRCVCRPGFRLEANTCTDVDECENELQCPGQKCVN
SVGSFKCVSCSPGFEIINGQCQDVDECRRTPSPCSNGRCENTPGSFMCVCRSGFKLHGNT
CTDVDECESSGICGPKSVCVNLDGSYRCECLPGFRATGPGRQCRDINECSEGEFCFPRGE
CVNTEGSYKCVCSQGYHTSANGTLCHDVNECARDGVCEDGHCVNTDGSFVCHCKPGFTAN
PEKTACLDVDECADSGGSVCGSQRCENTIGSFHCFVTCEPGYSLTATGECVDINECANKS
VCGHHMFCQNLIGTYQCICDQGYETAQDGQSCVDINECAVMAGVCGAARCWNVEGSFTCE
CENRQEEFDPLTRQCVTTGPGSSSLPPQPGEQKECYSRVDRRGQCAVLSSNTTVQECCCT
VGQAWGLRCQYTLCPQAGTPEFQAMCPNGPGYVTSAVGAFSYRDVDECKLFDPDLCKGGV
CVNNIPGYSCYCSSGYYYDVNLMECIDNDECESGDMCPGGQCVNTLGSYYCKCEPPLVLD
NTQRSCVNNSGLTVDENLSFCWLHVTADLVCQRLLQRIQMTFADCCCLYGEAWGLQCALC
PRRDEEEYETMCSSFGPPPNSPRYTERFAPLPGGGGGYRTPYAAPFYPDLPSFDYNDYGA
GTGHRSGLRTGPDSYTPFMPPGLGPRRYYEEEDYDSAAAPPFAPDPRTERFYGSSFIRPS
LTEGEEDEESWRGPAPFPPFTDRRPGSERPRRVYERPYESFAGLPEFECGILQGCQNGRC
VRVGEGYTCDCYDGYQLDIASMTCKDVDECEDPIYPECINARCVNTEGSYRCVCLRGFIA
SRRPNYCIPA
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggacactgattgtgctgctgtgttgtgtgtcggcactgctgcatgtgtctcca
gcggccgagcggattaaagttctcttcacgccaaccatctgcaggctgcgctgctccaac
ggacactgctccaactactgcgagcgaggcaatattaccacactgtacagcaatgaggat
gccacacacacctccggcttcagagtgtttttgtgccccatgttgtgtaaaaatggaggt
gtgtgcattcagaaagatcgatgcctctgtccttccaactttactggaaagttctgccat
atccccgcatcttcatcttccccctctgccaatgaggttgagaagccctcgaggggtaat
tttccagccagtcaggggatgatgcattcggagtacgtccttcctttacagagtcgacag
cagaaccaaaccaacgggtctcctatggtgacagttcgagtccgtcatcctcttgaagca
acggtgaagatccaccaggtggcgaaggtcacttcaggttcaggcttggagacggtgtgg
cgatcatcaggggtctcgggttctctggggtcccggggtcatagcagcgcgattctggca
gacagagcagaggctacacccgctctcgtccaggcccaaaccttcaggggagactctatc
tacacagaggtgtctgggtttaaatattgcttcagagaagttcgcaacggacagtgcagt
tctccgctgcctgggctccgcagtcaggaaacctgctgcaagggagatggtttagcatgg
ggaataaaagagtgtacactctgccctccagtatcaggaagtggcacaagtggagagaaa
agctgtccgaaaggctttgagagggttaatggtacacagtgtgtggatattaacgagtgc
ttgcagccgggtttctgtgagaacgggaagtgtgtgaacacccgtggaagctacagctgt
gtttgcaaacccggtttcttattggacgcctcacatggcatctgtatctcccagaaggtg
atctcagaggagaaggatcagtgtttccgtatagtctctcagggctcttgctctttgccc
atcctgaagaacatcaccaagcagatctgctgctgcagtcgtgtcggtaaagcctgggga
aggaagtgtgaggcctgcccatattttggatctgttgaatttaaggagatttgtcctgct
ggtcctggctaccattactcccccaacacgctgaaattgaatcagagggttacagaacca
cgcaaccctgcactggtttctcagacgaaccgcacgttgactacagtgactagatatgat
acatcattattacaatcaacaacaagaaatgagccaccacaaaaccaaagaccaacgagg
cctcagtctgcaactatcacccataacgtcaggattcagcagtccagtgctggtcagaaa
cagccaatcacgtcagaagttttcatcattcagaatgaaccacagctgagtcagcacaga
caaacaggaggtcctgcttcaccaactagccagccaagcagagaacttccccacaaacgt
gtgtgtgaggctaaccctcaggtttgtgggccgggtcggtgtgtcgatatacccggaggg
aaacacacatgtgcgtgtaatcctgggttcatcctgaattctcaagcaggtcattgccaa
gatataaatgagtgtttgttgaatccgaggccgtgtctgtctggtcagtgtgagaataca
gtgggaagttttcggtgtgtgtgtcctccaggctaccggagcgatgcccagcaaaaccgt
tgcacagatattgatgagtgtcgtctgatccctaaccgttgcactaatggacgctgtgag
aacacactcggcagcttcaggtgtgtgtgcaggacaggatacaaatttcagaacaacact
tgcacagacattgatgagtgtgatgaccctctccgctgtccggggaaggagtgcataaac
actcaaggttcctacaactgtgtgccctgcaaacctggatttggactccttaatggccag
tgcacagatattgatgagtgtcgtcagcgttcgtcgctttgctctaacggccgctgtgag
aacacacctggcagctacagatgtgtgtgtaataaagggttcaagctgcagggtagcatc
tgcacagatgtgaatgaatgtgaggactctctgcagtgccctggtcaggaatgtattaat
actctgggttcatatagatgtgtgtcatgtggccctgggtttgcaataaccaacagaaga
tgcacggatatcgatgagtgtcgtcaggttcctgctccctgtgctaatggccgctgtgag
aacgcacctggcagctacagatgtgtgtgtcatacagggtacaagcttcaagacaacacg
tgcaaagatataaatgagtgtgagaatcatctgcagtgtcgtggtcaggtgtgtgtgaac
actccaggttcctaccggtgcacatcctgtagagctggattcagctttcataatggacag
tgcacagatgtggatgagtgtgctcagaacacacgtctctgtgctaacggacgctgtgaa
aatacccccggaagcttccgatgtgtgtgtcgacctggattcagattggaggcgaacacc
tgtacagatgtggacgagtgtgagaacgagcttcagtgtccggggcagaagtgtgtgaac
tctgttggctctttcaagtgtgtttcgtgcagtccaggcttcgagatcattaatggccaa
tgtcaagatgtggatgagtgcagacggactccatccccatgctctaacggccggtgtgaa
aacactcctggcagcttcatgtgtgtgtgtcgctctggattcaaactgcatggaaacacc
tgcacagatgttgatgagtgtgagagctctggaatatgtgggccaaagagtgtgtgtgtg
aacttggacggttcatacaggtgcgagtgtttgcccgggttccgtgctacaggacctgga
cgccagtgccgagacattaatgaatgttcagagggcgagttctgcttccctagaggagag
tgtgtgaacacagagggctcatacaagtgtgtgtgctctcagggttaccacacaagtgcc
aatgggactctatgtcatgatgtgaatgagtgtgcccgagatggagtgtgtgaggacgga
cactgcgtcaacactgacggctcgtttgtgtgtcactgcaaacctggtttcactgccaat
cctgaaaaaacagcctgcctggatgtggatgagtgtgcggactctggtgggagtgtatgt
ggttctcagcgctgtgagaacaccatcggctcgtttcactgcttcgtcacctgtgaacct
ggatacagcctcacagctacaggagagtgtgtggacattaacgagtgtgcaaacaagagt
gtgtgtggccatcacatgttctgtcagaatctgattggaacatatcagtgtatctgtgac
caggggtatgaaacagcacaagacggacagtcctgtgtggacattaatgagtgtgcggtg
atggcgggtgtgtgtggagcggcacgctgttggaatgttgaaggttcattcacatgtgaa
tgtgagaatcggcaggaagaatttgacccacttacacgacagtgtgtgaccacagggcca
gggtcatcatcactcccacctcagccgggagagcaaaaagagtgttactctagagtggat
cggaggggccagtgtgcagttctatcctctaatacgactgtacaggagtgctgctgcact
gtggggcaagcctgggggctcaggtgccaatacactctctgcccacaagctggaacacct
gaattccaagcaatgtgtccgaacggacccggctatgtgacttctgcagtgggggccttc
agctatagggacgtggacgagtgtaaactcttcgacccggatttatgtaaaggtggtgtg
tgtgtaaacaacatccctggttactcgtgttactgctccagtggatactactatgacgtg
aacttaatggagtgtatagacaatgatgagtgtgagagtggggatatgtgcccgggtggt
cagtgtgtgaacacactcggttcatattactgcaagtgtgagccacctttagtgctggat
aacacacagcgctcctgtgtcaacaattcaggcctcactgtggatgagaacctctcattc
tgttggctgcatgtaacagctgatctggtgtgtcagagacttttgcaaagaattcaaatg
acatttgcggattgttgctgtttatatggagaagcatgggggcttcagtgtgctctgtgt
ccccgcagagacgaggaggaatatgagacaatgtgcagctctttcggtcctcctccaaac
tctcctcggtatacagagcgttttgccccactgccggggggaggagggggttacagaacg
ccgtatgctgcccccttttacccggacttaccctcgtttgattacaatgactacggtgca
ggaacaggacacagatctggattgaggacaggacctgactcatatacccccttcatgcct
cctggactcggccccaggcgttactatgaggaggaagattatgactcagctgctgctcct
ccatttgcaccagatcctcgtaccgaacgcttctacggctcaagttttatccgaccctcc
ctcactgaaggtgaagaagacgaggagtcatggagaggccctgcccctttcccacctttc
actgacagaagaccaggaagtgaaagaccacggagagtctacgaaaggccttacgagtca
ttcgctggcctgccagagtttgagtgtggtatactgcagggctgtcaaaatggccgctgt
gttcgtgtaggtgaaggatacacctgtgactgttatgatggatatcagctcgatatcgcc
tctatgacctgtaaagatgtggatgagtgtgaggatccaatctatccagagtgtataaat
gcacggtgtgtaaacacagaaggttcatataggtgtgtgtgtctgaggggattcatcgcg
tcacgcagaccaaactactgcatacctgcttaa
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integrated database retrieval system
