Pangasianodon hypophthalmus (striped catfish): 113527882
Help
Entry
113527882 CDS
T05759
Name
(RefSeq) rab11 family-interacting protein 4A-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113527882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113527882
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113527882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_1
EF-hand_9
EF-hand_6
bZIP_2
EF-hand_8
bZIP_1
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
113527882
NCBI-ProteinID:
XP_026771829
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MEGISSSQSEHLVLLVSKLKEVFDMCDEDEDGFIRVEHFVHLGRQFGQTDEEIKKFAECL
DPNANGKISFKDFCHGVFAIKGCDEILKNVLDSTTMDTHTFQTDNNFYYQSGDESVVTLP
CLLYPLDSEMDSSAGSESSDVRHDDKEEVLGGLFLPGNSSCQLGSSAAASVISAEEQFED
YGEGEDVDFIPSSPCADDDTRTNGFSDLGSSLPSSAGHTPQKIRHFYNSELLDVYCSQCC
KKVNLLNDLEARLKNLKANSPNRKISSTAFGRQLFHHSNFSSSHGSTEDLFRDSIDSCDI
DITEKVSYLEKKVTELENDSLANGDLKSKLKQDNTQLVHRVHELEEQIKDQEARAEQNLE
EELKRHREIYSKMEKDKSNQIELLSNRVQQLEEENSEMKVNVCRLKSQTEKLDQEKQRMT
DKLEDTSLRLKDEMDLYRKMMDKLWQNRHEFQKEREAMQELIEDLRRELEHLQLFKLETE
KPGRGRNSLSEFSARTREIELEHEVKRLRQENHKLRDQNDDLNGQILSLSLYEAKNLFAC
HTKAQSLATEIDNASRDELVEALKEQEEINFRLRQYMDKIILAILDHNPSILEIKH
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggagggcatttcctcttcccagtctgagcatcttgtgctgttagtgagtaagctgaag
gaagtgtttgacatgtgtgatgaagatgaagatggatttattcgagttgaacactttgtg
catctcggaaggcagtttggccaaacggatgaggagataaagaagtttgcggagtgtctg
gacccgaacgctaacggcaagatcagctttaaagatttctgtcatggggttttcgccatt
aaaggttgtgatgagatcctgaagaatgttctggattcaaccaccatggacacacacaca
tttcaaacagacaacaacttctactatcagagtggtgatgagagcgtcgttacgctgccc
tgcctgttgtaccctcttgactctgaaatggacagcagcgcggggtccgagtcatctgat
gttcgtcatgacgacaaagaggaagtccttggtggactgtttctgcctggaaacagttcg
tgtcagcttggctcatcggcagcagcttctgtaatttcagcggaggagcagtttgaagat
tacggagaaggagaagatgtagattttattcctagtagcccctgtgctgacgacgacaca
cggactaatggattttctgatctgggctcctcactgccttccagtgctggacatacacct
cagaaaatccgacacttttacaacagtgagctgctggatgtttattgctctcaatgctgt
aagaaagtgaacttgctcaacgaccttgaggctcgactcaaaaacctcaaagccaacagc
ccaaataggaagatctccagcacagcttttggacgacagcttttccatcacagtaatttc
agcagtagtcatggcagcactgaagatttattccgcgacagcatcgactcctgtgacatt
gatatcaccgagaaggtgagttacctggagaagaaggtgacagagctggagaatgacagc
ctggcaaacggagacctgaaatccaaactgaaacaggataacacacagctggttcacagg
gtacatgagctggaggagcagattaaggaccaggaggcacgagcagagcaaaatttggag
gaggagctgaagagacaccgagagatttacagcaagatggagaaagacaagagcaaccaa
atagagcttctctctaacagagtacagcagctagaggaggagaactccgagatgaaggtg
aacgtttgccgattaaagtctcagactgagaaactggaccaggagaagcagcgcatgact
gataaactggaagacacgagcctgcgtctaaaggatgagatggatctgtataggaagatg
atggacaaactgtggcagaacagacacgaatttcagaaagaacgagaggccatgcaggaa
ttgatagaggacctgcgtcgggagctggagcatctgcagctgtttaagttagaaacggag
aaacctgggcgtggtagaaactccctgtctgaattcagcgctagaacacgcgagatcgag
ctcgagcatgaagttaaacgtctgcgacaggaaaaccataaactgcgtgaccagaacgac
gatctgaatggacagattctcagtctcagtctgtacgaggctaaaaacctctttgcttgc
cacactaaagctcagagtctcgccaccgagattgacaacgcatccagagacgagctggtc
gaggctctgaaggagcaggaggaaatcaacttccgcctccggcagtacatggataagatc
atcctggctatactggaccacaatccctccatcctggaaatcaagcactag
DBGET
integrated database retrieval system
