Pangasianodon hypophthalmus (striped catfish): 113528228
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Entry
113528228 CDS
T05759
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3
KO
K26226
liprin-alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113528228 (ppfia3)
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113528228 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF745
DUF4407
Motif
Other DBs
NCBI-GeneID:
113528228
NCBI-ProteinID:
XP_026772447
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MMCEVMPTISEDGRGGGGGGPSSPAGGGSGMGGGMGGIGGGYEGGSTGNLESLMVNMLTE
RERLLESLRETQESLGTAQLRLRELGHEKDSLQRQLSIALPQEFAVLTKELNVCREQLLE
REEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKS
LFEHHKALDEKVRERLRVALERVAVLEEELESSTNEVLTLRDQIKRRERGQDNGKERLPN
GPSSILDDGEIDRQREGEIERQRAELSQLKERLALMCRQVGEIEEQLTAARREVTKTEEA
NQKLQREIKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKLENELASKESLYRQS
EEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQME
AQLEEKNQELQRDQLIAELERLQLELDQLRGRSGSSYSRSLPGSALELRYSQGGGSLPAG
STTHLDHYGSTGSGGVVRRAHRGRWGGAREDASKYGEWESGALLGPGFEGGVEGGCSDDE
EDRETLFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIKLIQEEKENTELRAEEIESRVS
SVALDGPPVPPSSLGRDASGRTFITPSLTSSTLASPSPPSSGHSTPRLPHSPARETERQN
NKEDDRSLALLDSTPPPTPRALRLDRMSHTHPGAMLDDSREFRSLSADGSSSNSSQDSLH
KASKKKSIKSSIGRLFGKKEKGRMGQPGRESTSLASTPSDDLGSVDPLGLTKMAGPVDKD
RRSKKKHELLEEACRQGLPFASWDGPTVVSWLEEIVGYVLISVSLSLFLSFSHSLSHSLS
LSVPLCVSSLGFSVKHLLLFPQSSVVAYTLLPPNDPVTNKLFLPLFPLFLSSLDIPPSSS
LSSACLSRCSCCFSSSPLPVSLFNSSPVQELKEFSWDQILAYGDMNHEWVGNDWLPSLGL
PQYRSYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERK
RDESQHQNKDVMVWSNERVMCWVQSIGLKEFADNLAESGVHGALLALDDTFDYTDLALLL
QIPNQNTQARQLLEKEYNSLIAMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSS
ETLPANFRASAISTPSVTLRKVQSEVSPRGESASVRTYSC
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccactatatcggaggacggtcgtggtggaggaggaggcggg
ccgtcctcgcctgccgggggcgggagtggcatgggagggggcatggggggcatcgggggt
ggctacgagggcggcagcacgggcaacctggagtctctgatggtgaacatgctgacggag
agagagcggctgctggagagcctgagagagacgcaggagagtctggggacggcacagctc
cgccttcgggaactgggacatgagaaagactcactccagagacagctgtccatcgccctg
cctcaggagtttgccgtgttgaccaaagagctgaatgtgtgtcgggagcagctgctggag
agagaggaagagatcgcagagctcaaggcggagaggaacaacacacggttgttgttggag
catttggagtgtttagtgtctcgtcacgagcgctctctgaggatgacggtggtgaagaga
caggctcagtctccagctggcgtctccagcgaggtcgaggtgctcaaagctctcaagtct
ctgttcgagcaccacaaggctctggacgagaaggtgagggagcgactgcgtgtggctctg
gagcgagtggccgtcctggaggaagagctcgagtcctctaccaacgaggttctaactctg
cgtgatcagatcaaacgacgtgagcgtgggcaggacaacggtaaagagcgcctcccgaac
ggcccgtcctccatcttggatgatggagagatcgacagacagagggagggagagattgag
cgccagagggcggagctttcacagctcaaggagcgactggccctcatgtgcagacaggtt
ggagagattgaggagcagctcactgccgccaggagggaggtgaccaagactgaagaagcc
aatcagaagcttcagagggagattaaagaggctttgtgtcagagagaggatatggaggag
agaattacgaccctagaacgcaggtacctgagcgcccagcgggaggcgacgtctctccac
gacatcaaagacaagctggagaacgaactggccagtaaagagtctctatacagacagagt
gaggagaagaaccggcagctgcaggaacgtctggatgacgcaaagcagaagctccagcag
acgctgcagagagccgagacgctgcccgagatcgaggctcagctcgctcagagagtggct
gctctcaacaaggctgaggaacgccatggcaacttcgaggagcgactgcgacagatggag
gcacaactggaggagaagaaccaggagctgcagagagatcagctgattgcggaattggag
aggctgcagctggaactggatcagctgaggggcaggtctggctcctcctactctcgctct
cttcccggcagcgctctggagctcaggtactcccagggaggcggttctctacctgccggc
tccaccactcacctggatcactatggcagtacaggctcagggggcgtggtcagacgggcc
caccgtggacgctggggcggagccagagaggatgccagcaagtacggcgaatgggagagc
ggcgctttgctcggcccgggtttcgagggcggagtcgagggcggctgctccgatgatgag
gaggatcgcgagacgctcttcggctctgagctgctttctcccagcggacagacagacgtc
cagacgctggccatcatgcttcaggagcagctggaggccatcaacaaggagatcaagttg
attcaggaggagaaggagaacacggagctgagggctgaagagatcgagagccgtgtgagc
agcgtggctctggacggacccccggttcctccgtcctctttgggaagagacgccagtggc
aggaccttcattactccgtccctcacctcgtccaccctggcgtccccctctccgcccagc
tcgggtcactccaccccacgcctgccccactctccggcacgcgagaccgagagacagaac
aacaaggaagacgataggtccctggccctgctggactccacccctccacccacccctcgt
gcgctgcgattggacagaatgagccacacccaccccggagccatgctggatgacagccgc
gagttccgcagtctctcggcagacggcagcagctccaacagcagtcaggattccctccac
aaggccagcaaaaagaaaagcatcaagtcttccatcgggcgccttttcggaaagaaggag
aagggacgcatgggacagccaggccgcgagtccacctctttggcttccactccctctgat
gatctgggctccgttgacccgctcggtctcaccaagatggccggacctgtggacaaggac
cgccgcagcaagaagaaacatgagctgttggaggaggcgtgtcgtcaggggcttcccttc
gcctcttgggacggccccacggtggtgtcctggctggaggaaattgttggatatgtgttg
atctctgtctctctctctctctttctttctttctctcactctctctctcactctctctct
ctctctgtccctctttgtgtgtcctcactaggctttagtgttaagcatcttctgcttttc
cctcagagttctgtcgtagcgtacacactgcttccacctaatgacccggtcactaacaaa
ctgttcctccctttgttccctctcttcctgtcctccctcgacatccctccttcttcttcc
ctttcatcggcgtgtctttcccgctgctcctgctgcttttcctcctctcctctccccgtg
tctctctttaactcctcgcctgtgcaggagctgaaggagttcagctgggatcagattctg
gcctacggtgatatgaaccatgagtgggtcgggaatgactggctgcccagtctgggtctg
ccgcagtacaggagctacttcatggagtctctggtggacgcccgcatgctggaccacctc
accaagaaagagctgcgtggccaactcaaaatggtggacagctttcacagggtgagcctg
cactacggcatcatgtgcctgaagcggctgaactacgaccggaaggagttggagaggaag
agagatgagagccaacaccagaataaagatgtgatggtgtggtcgaatgagcgtgtgatg
tgctgggtgcagtccatcggtctgaaggaattcgcagataacctggctgagagcggagtg
catggagctctactcgccctggacgacacctttgactacaccgacctggcgctgctcctg
cagatacccaaccagaacacacaggcacgccaactcctggagaaggagtacaactccctg
atcgccatgggaaccgagaggaggccagatgaggacggcactaagacgttcactcgctct
ccgtcctggaggaagatgttccgtgagaaggacctgagaggagtgacctcagactcttca
gagacgctgcctgctaacttccgcgcctcagccatctccactccatctgtgaccctgcgg
aaagttcagagtgaagtgtctccgaggggcgagtcagcatcagtgagaacatactcttgc
tga
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