Pangasianodon hypophthalmus (striped catfish): 113529177
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Entry
113529177 CDS
T05759
Name
(RefSeq) unconventional myosin-VI-like isoform X1
KO
K10358
myosin VI
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04814
Motor proteins
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113529177
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113529177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113529177
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113529177
04147 Exosome [BR:
phyp04147
]
113529177
Membrane trafficking [BR:
phyp04131
]
Others
Actin-binding proteins
Myosins
113529177
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
113529177
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113529177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
MYO6_lever
Myosin-VI_CBD
Myosin_N
IQ
Motif
Other DBs
NCBI-GeneID:
113529177
NCBI-ProteinID:
XP_026773991
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MEDGKPVWAPHPTDGFQLGTIVDIGADSLTIEPLKEKGKTFLASVSQVFPAEDDINKHVE
DNCSLMYLNEATLLNNIRVRYSKDKIYTYVANILIAVNPYYDIPKLYSPDTIQQYRGRSL
GTLPPHVYAIADKAYRDMKVLKMSQSIIVSGESGAGKTENTKFILRYLTMSYGTGQDIDE
RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNGKNAVVGGFVSHYLLEKSRICTQGQ
DERNYHVFYRLCAGAPEDIREKFHLSSPNSFRYLNRGCTRYFATKDTDQKILQNRKSPEH
LKAGPLKDPLLDDNGDFNRMVVAMKKIGLDDAEKLDLFRVVAGVLHLGNIDFEEAGSTSG
GCNLKRQSSQALQHCAELLGLDEEDLRVSLTTRVMLTTAGGAKDTSIKVPLKVEQANNAR
DALAKAVYSRLFDHVVTRVNQCFPFESSANFIGVLDIAGFEYFEHNSFEQFCINYCNEKL
QQFFNERILKEEQELYQKEGLGVNEVKYVDNQDCIDLVESKLVGILDILDEENRLPQPSD
QHFTETVHSKHKNHFRLSVPRKSKLTVHRNVRDDEGFIIRHFAGAVCYETSKFVEKNNDA
LHMSLGSLISESKDRFIRELFENSNSSKDVKQKAGKLSFISVGNKFKTQLNILLDKLRST
GSGFIRCVKPNLKMVSHRFEGSQILSQLQCSGMVSVLDLMQGGFPSRAPFHELYNMYKQY
MPPKLTRLDPRLFCKALFKALGLNEKDYKFGLTRVFFRPGKFAEFDQIMKSDPDHLAELV
KRVNKWLIRSRWKKVQWCALSVIKLKNKMLYRANACVKMQKTVRMWLCKRKHKPRIDGLV
KLRSLKKRIAMLNEVVTGLKESKQEMSKQIQDLDASIDTLMRKIKSTMMSRIDMDHEHQA
LVTRSERLLCAMQKQKQEEEERERLRHIQEEMEKERKRREEEERLRKQAEEERRLKAEME
LKRKQEEEERKKREEEERRLQEEMERQIQAEREEEAARQAVLEQERRDRELALRIAQSEA
ELIPEDTGDSGLRSNGSVPSSPERATVPAPQNLKGLTMEEMAQEMSELLARSRQVQATKA
AAGTKKHDLSKWKYAELRDAINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRNTEAEQ
RTPKSLTDYGCARHVINVSQNYVAPPIPARQHEILMNRQQRYFRIPFIRPGDQYKDPQNK
KKGWWYAHFDGSWIARQMELHPDKHPILLVAGKDDMEMCELNLEETGLTRKRGAEILARQ
FEEIWERCGGIQYLRNAIESRQARPTYATAMLQNLLK
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgggaagccggtgtgggcgcctcaccctactgacgggttccagctgggcacc
attgtggacattggtgctgacagtctgaccatcgaacccctcaaggaaaagggcaagacg
tttctcgcttctgtcagccaagtgtttccggctgaggacgacatcaacaaacatgtcgag
gacaactgctcattgatgtacttgaatgaggctacacttctgaacaacatccgtgtgcgc
tacagtaaagataaaatttatacgtatgtagccaacattctgatagcggtgaatccctac
tatgacatcccgaagctctattcgcccgacaccatccagcagtaccggggccgatctctg
gggacgctcccaccgcacgtgtacgccatcgctgataaagcctaccgtgacatgaaggtg
ctgaagatgagtcagtcgatcattgtctctggcgaatcaggtgctggaaagaccgaaaac
acaaagtttatacttcggtatttaacaatgtcatatgggacgggccaagacatcgatgag
aggatagttgaagcaaatcctctgttggaggcgtttgggaacgctaaaacagtccgcaac
aacaacagcagccgctttggcaagtttgtggagattcattttaacggaaagaacgcggtg
gtcggaggtttcgtgtctcactaccttctggagaaatcacgtatctgcacacagggtcag
gacgagaggaactaccacgtcttctacaggctatgtgccggagcaccagaggacatccgc
gagaaattccacctgtcctctccaaactcctttaggtacctaaaccgaggatgtacacgc
tacttcgctacgaaggacacggaccagaagatcttacagaaccgcaagagcccagagcac
ctgaaggcaggccctctgaaggacccactgctggatgacaatggcgattttaaccgcatg
gtggtggccatgaagaagattggcctagacgacgctgagaagctggatctgttcagggtg
gtggctggagtcctccacctcggcaacattgactttgaggaagcgggcagcacttcagga
ggctgtaacttaaagaggcagtcgagtcaggctctgcagcactgtgccgagctcctgggg
ttggatgaagaagatctacgagtcagtcttaccaccagagttatgctcacaacagcagga
ggcgctaaagacacttctatcaaggttcctctgaaagtggagcaggcgaataacgcgcga
gacgctttagccaaggccgtttacagccgtctgttcgatcacgtggtcacccgagtcaat
cagtgcttcccctttgaatcctcggctaattttatcggcgtgctggacattgccggcttc
gaatattttgagcacaacagtttcgagcagttctgcatcaactactgtaatgagaagctg
cagcagttcttcaatgagcgcatcctcaaagaggagcaggagctgtatcagaaagaggga
ctgggagtgaatgaggtgaaatacgttgacaatcaagactgtatagacctggtagagtca
aagctagtgggcatcttggacattttggatgaagaaaaccgtctacctcagccaagcgat
cagcactttactgaaactgtccacagcaagcacaaaaaccacttccgtttaagtgttccc
aggaagtcgaagcttacagtgcacaggaacgtgagggatgatgaagggttcatcatcaga
cattttgcaggagctgtgtgttatgagacgagcaagtttgtggagaagaacaatgacgct
ctgcacatgtccttggggagtctcattagcgagtcaaaggatcggtttatccgcgagctc
tttgagaactccaacagctccaaagacgtcaagcagaaagcgggcaagctcagcttcatc
agcgtgggcaacaaattcaagacccagctgaacatcctgctagacaagctccgcagcacg
ggctccggttttatccgctgtgtgaagcccaacttgaagatggtgagccaccggtttgaa
ggctcgcagatcctgtcacagctccagtgttcagggatggtgtcagttctggacctgatg
cagggtggcttcccttcccgcgctcccttccacgagctctacaacatgtacaagcagtac
atgcctcccaaactcacccggctggacccccggcttttctgcaaggctctgttcaaagct
ttgggcctgaatgaaaaggactacaagtttggacttacacgagtcttcttcagacctgga
aagtttgccgagtttgaccagataatgaagtcggatccggatcatctggctgaactggtg
aaacgggtcaacaagtggctcatccgcagccgctggaagaaggtgcagtggtgtgctctg
tccgtcatcaaactgaagaataagatgctatatcgggccaatgcctgcgttaagatgcag
aagaccgtgcgcatgtggctgtgcaagagaaaacacaaacctcgcatcgatggcttggtg
aagctgcgcagcctgaagaagaggatcgccatgctcaacgaggttgtgaccggtctcaaa
gagagcaaacaggaaatgagcaaacagatccaggacctggatgcctccatcgacacactc
atgcgcaagattaagagcaccatgatgagccgcatagacatggatcacgagcatcaagcg
ctggtgacgcgctccgagcgcctcctctgtgccatgcagaaacagaagcaggaggaggag
gagcgtgagagactgcgccacatccaggaagagatggagaaagagaggaagcggagggag
gaagaggagagactccgcaaacaagcagaggaggagagacgcctgaaagcagagatggag
ttgaagaggaaacaggaagaagaggaaaggaaaaagagggaggaagaggagagaagattg
caggaggagatggagcggcagatacaggccgagcgagaggaagaggcggcccggcaggcg
gtactggagcaggagaggcgggaccgagagctggctctgcgaatcgctcagagtgaggcg
gagcttattcctgaggacacgggagatagcggactgcgcagtaatggcagtgtcccatca
tcccccgagagagcaactgttcctgcaccacaaaacctcaagggtttgaccatggaagaa
atggcccaggaaatgtccgagcttctggctagaagtaggcaggtgcaagccacgaaggct
gcggccggcaccaagaagcacgatcttagcaagtggaagtacgcagagctccgagacgcc
atcaacacttcctgtgatatcgagctgttggctgcatgccgagaggagttccaccgcagg
ctgaaggtctaccatgcctggaaatcgaagaacaagaaacgcaacaccgaggccgagcag
aggactcccaaatccctcacggactacggttgtgcacgccatgtgataaatgtgtcccag
aactacgtggcgcctccaatcccggcccggcaacatgagatcctgatgaaccggcagcaa
cgctacttccgcattcccttcatccgccccggagatcagtacaaagacccacagaataag
aagaaggggtggtggtacgcacacttcgatggatcctggatcgccaggcagatggagctg
caccctgataaacatcccattctgctagtggccggcaaggatgatatggagatgtgtgag
ctgaatttagaagagacaggtctgacccgtaagcgtggagcggaaatccttgcccggcaa
ttcgaggagatctgggagcgctgcggaggaatccagtatctgaggaacgctattgagagc
cgacaggcacggcccacctacgccacggccatgctgcagaacttgctcaagtag
DBGET
integrated database retrieval system
