Pangasianodon hypophthalmus (striped catfish): 113529269
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Entry
113529269 CDS
T05759
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113529269
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Others
Others
113529269
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113529269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
Crescentin
AAA_13
GAS
DUF5798
Fez1
GP38
Motif
Other DBs
NCBI-GeneID:
113529269
NCBI-ProteinID:
XP_026774136
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MYGSSRSVSKMDGNHSGSRNSQGNSGRSPRLPRSPRMGHRRTNSMGGSGGGPGGPGGKTL
SMENIQSLNAAYATSGPMYMSDNEVALATSSDIPKSGVATGRFGGSIPYGVRGTVTGSTP
DMAMVPTVSTDSISFGGELHSASTVPHSLRQARDNTIMELQAQLKEVLRENELLRKEVEV
KESKLSSSMSSIKTFWSPELKKERALRKDEASKIAVWKEQYRAIQDETQHLQTTVQALQA
ELRIQRDLNQLLQPPGEPLALEPGEEQERQARELVLLRRTIQEMELRLETQRQTLVARDD
SVKKLLEMLHNKGPSSKSSEEDHELTCRLADAEMHAHHLENLLEQRDKEMVALREELHRR
LEGTPESTKTKALQTVIEMKDSQISSLERGLRELEDQVMMLRSSNMLTCEERQEEVKQME
VYRNHTKFMKNKMDQVKQDLSRKDTQLLGLQTKLETLTNQFSDSKQHIEVLKESLTAKEQ
RAAILQTEVDALRLRLEEKETLLNKKSKQIQDMSEEKSTLNGEIHDLKDMLEVKERKINV
LQKKIENLQEQLRDKEKQMSSLRERVKSLQTDTSNTDTVLSTLEDSLAEKERIIERLKEQ
RDREERERAEELDSSKRELKELKEKVSLLQGDLSDRENSLLDLKEHASSLASSGLKKDSK
LKTLEIALEQRREECSKLENQLKRAQNAAVEAQANSELSKRIASLEADVARHREESGKAQ
AEVDRLLEILRQMENEKNDKDRKINELESVASRQMKEQGKKPPGKHREPAGKGRSANDGP
QQESLRQKAERIEELEEALRESVQMTAEREMVLAQEEAARTHQEKQMEELLGAMEKVKQE
LESMKAKMSSTQQSLAEKEAHLTTLRAERRRHLEEVLEMKQEALLAAISEKDANIALLEL
SSSKKKKTHEEVAQLRREKDRLVQQLKQQTQNRMKLMADNYDDGHLKTPPDQTNHKAPKS
PDQIKAGRRAAVHRSSTLAT
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagttctcgctctgtgagcaaaatggatggcaatcacagtgggagccggaac
agccagggcaactcaggccgctctccccggctgccacgctcaccccgaatgggacaccgc
cgcaccaacagcatggggggcagcggcggtgggcctggtggccctgggggcaaaactctt
tccatggagaacatccagtccctcaacgctgcctatgccacatccggtcccatgtacatg
agcgacaatgaggttgcactcgccacctcctccgacatcccgaaaagtggcgtggcaacc
ggacgcttcgggggcagcatcccatatggcgtgcgtggaacagtcaccgggagcactcct
gacatggccatggtgcctactgtgtccacagactccataagctttggaggagagctccat
tcagcatccactgtgccacattcattgcgccaggccagggacaacaccatcatggaactg
caggcgcagctgaaggaggtgctcagggagaatgagctcctgaggaaggaggtggaggtg
aaagagagcaaactcagctcatccatgagctccatcaagaccttctggagccctgagctg
aagaaggagagggcgctgcgcaaagatgaggcttccaagatagcagtgtggaaggagcaa
taccgtgccattcaggatgagactcagcacctgcagaccacagtgcaggcgctgcaggct
gagttgcgcatccaacgtgacctgaaccagctgctccagccaccaggggagccgcttgca
cttgagccaggcgaggagcaagaaaggcaggctcgtgagcttgtcctgctccgccgcacc
attcaggagatggagctgcggctggagacacagcggcagacgctggtcgcacgtgacgac
tctgtcaagaagctgctggagatgctgcacaacaaagggccatcaagcaagtccagcgag
gaggaccatgagctcacgtgccgcctagccgacgccgagatgcatgcacatcacttggag
aacctgctggagcagcgtgacaaagagatggtggctttgcgggaagagctgcatcggcgc
cttgaagggacgccggagtctacaaaaaccaaagctctgcaaaccgtcattgagatgaag
gactcacagatcagctctctggagcgtgggctgagggagttggaggaccaggtcatgatg
ctacgctccagtaacatgctgacttgcgaggagcgacaagaggaggtcaagcagatggag
gtctaccgcaaccacaccaagtttatgaagaacaagatggaccaggtgaagcaggacctc
tctaggaaggacacccagctccttggcctgcagaccaaactcgagacgcttaccaatcag
ttctctgatagcaaacagcacatcgaggtgctcaaagagtccctgactgccaaagagcag
cgagctgccatcttacagacagaggtggatgcactgaggttgcgtcttgaggagaaggaa
acactgctgaacaaaaagagcaagcagatccaagacatgtctgaggagaagagcacactc
aacggcgagatccatgaccttaaagacatgctggaagtcaaagagcgaaaaatcaatgtg
ctacagaaaaagattgagaacctgcaggagcagctgagggataaagagaagcagatgagc
agcttgagagaaagagtgaagtctctgcagactgatacatccaacacagatacagttctc
agcaccctggaggactcactggccgagaaggaaagaattatcgagcggctgaaggagcag
cgagaccgggaggagagagagagagccgaggagctggacagcagtaagagagagctgaaa
gagcttaaggagaaagtgagcttgctgcagggggacctttcagaccgagagaattctttg
ctggaccttaaagagcatgcatcatccttagcctcatctgggctaaaaaaagactccaaa
ctgaaaactctggagattgcccttgagcagaggagggaagagtgctctaaattggagaac
cagctaaagagggcgcagaatgcagctgttgaggcacaggccaactcggagctctccaag
cgaattgcctcactggaagctgatgtggccaggcacagagaggagtctgggaaggcccag
gctgaagttgaccgactgctggagatcctacgccagatggagaatgagaagaatgacaaa
gacagaaaaatcaatgagctcgagagtgtggcttccaggcagatgaaggagcagggcaag
aagccgcctgggaaacacagggagccagctggcaaaggccgcagcgccaatgatggccca
cagcaggagtctttgcgacagaaggcagagcgcatcgaggagctggaggaggcgctgagg
gagagcgtacagatgacggcagagagagagatggtgttggcacaggaggaggcggcacgg
actcaccaggagaaacagatggaggaactgctcggggcaatggagaaggtgaagcaggag
cttgagtcaatgaaagccaagatgtcatccacccaacagtctctggctgagaaggaggct
catctgactacgctgagggctgagaggaggagacatctggaggaagttctggagatgaaa
caggaggctctgttggctgctatcagtgagaaggatgctaacattgccctgctggagctg
tcctcgtccaaaaagaaaaagacgcatgaggaagtggcgcagctacgaagggagaaggac
cgtctggtgcagcagctcaaacagcagacacagaatcggatgaagctcatggcggataac
tatgacgatggccatctgaaaacaccacctgaccagaccaaccacaaagctccgaaatcc
cccgatcagattaaagctgggcggagagctgcagtgcacaggagctccacattagccacc
tga
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