Pangasianodon hypophthalmus (striped catfish): 113530562
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Entry
113530562 CDS
T05759
Symbol
fyco1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113530562 (fyco1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113530562 (fyco1)
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113530562 (fyco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
Peptidase_M10
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
113530562
NCBI-ProteinID:
XP_026776501
LinkDB
All DBs
Position
Unknown
AA seq
1498 aa
AA seq
DB search
CLTFYSTDVVAELTKEYKENGEPITDDSTNLQKFSNKLEYLLQFDQKEKTTFLGTRKDYW
DYFSDCLAKIKGANDGIRFVKSIPELKTSLGKGRAFIRYSLVHQRLADTLQQCLMNKKAT
SDWYYSRSPFLKPHLSVDIVNSLYELNEVQFDVASRGHDLDSAWPTFARRTLGMTNSPSH
MWKAPSRSSSINSLASSYSQAPEFLCSPEFGHSLLSESAEPLSDSAITTMDELRLELDQS
ELKQHELVEHVQQLGSEATELREVVAELQRQLDISLAAQSNHQELQLKLEVLAEREQTLA
QDLEILRGREAVKEAANQEIQGKLAAAEKKNEELMAKLDGMLEEKGQRTASQFDSAQKIH
ELLDGLKEAEKGRIEALAHGEEKRMQAEHLAEELRMKEQALRDVEVKMAALTEKGTKLMK
QAEEQRNAMDKLQEELSVREKEASSLQKDLQDLQHCLETMEQQAAEERKRALEEREVLQK
KLSSLKESLEGQVQNLKAQLRSKETELISSVKQIQNLGAEAEKIAGEKQCLSGSIVELET
RIKDQTKKIDEYKQECTNLTELNNKLLQTVSNNEEIMKELKKSKAVLENDLAGLRASEKQ
LRGQLDDAKVTVDEREQRMREENRNLDEKLQKAIMQIKELESIVHRLEQEKKDLREECIK
SKDALTAAQGELHKFTDQIRDLESSLEVARCNEVNLTLQLKEEHSQLEDRERLCEELQER
LDELEAVEGELEAGKAEAERALEKQKEMMERLEVQKKAVEESQLEMSACRAKEVQDMTLK
VALLEEQLGLNVKEVSRLQEEMVDLKARLLCSEEEKVKIQTKLEITEASRIELQTLTEQL
KKQAEEQNRNHVNELLQSKQSMEEILSELGAERSALAKISADFAAAQEDLAVIKIQNERL
VMENAETREGLHRANTEMAELGMTICKLTAEREEAQERWAAESTRIHELEEQGERETDCL
NASIAALRQENASLREELLQTEKLPETVLELKGMLDKSEREREVAREETAAMRFQMSTEN
MAHQNHVKSLNEELESLKAQLKSESEKASSLEVKVSELEEMNSECSRLMGEKDSHINKAE
SQIRCGEDEIQQLKERVTCVQEALALAETERDKLKEKMEKVQSHAQAEQIKMAAEIEDLS
HIKTTLEERLIELIREKDALWQKSDALEFEQKQRAEEQWWLVDQEATHCLSCKSQFTWWL
RKHHCRLCGRIFCYYCSNNFVSTRSGGKKERCCRECYTQHSAVVERFTRSEMSSPADTPA
VHTHTASAPTTPPAPPYIPTPRVTVTDPNVKQDDGVFDIITDEEVNGLYDSDTLSQTTAE
SQDGEAGSRAPQDPGVSGDAVVAEEQEEMPPTVQDAEIHLLKSGELASSVVLDITEIPQF
GDASHELFVKSSCYSIVSVTVHEHGHAVGWVFSSEPKSICFSVVYRESVNTPEEQAKVLI
PLTRCNSHKETIQGQLKARNPGVYTLIFDNSYSRFISKKVSYHLTTEKPVIYDGSDCP
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
tgtcttacattttactcaacagatgttgtggcagaactcaccaaagagtacaaagagaat
ggagagccaatcacagatgacagcactaacctgcaaaagttctccaacaagctagagtac
ctgctacagtttgaccagaaggagaagaccacgtttctgggcacaaggaaagattactgg
gactactttagcgactgtctggccaaaatcaaaggagccaatgatggcattcgctttgtc
aaatccattcctgagctaaagacgtcgctgggaaaaggtcgagcatttatccgctactct
ctggtccaccaacggttagctgacacccttcagcagtgcctcatgaacaaaaaggccacc
agtgactggtattattcccgaagtccctttctgaagcctcatctcagtgtggacattgtt
aactctctctacgagctcaatgaagtccagtttgatgtggcgtcccgggggcacgacctt
gattcagcttggcccacgtttgcaaggcggactctgggtatgaccaactctccgagccac
atgtggaaagcaccgagccgcagctccagcattaacagcctggccagctcatactcacag
gccccggagtttctctgcagtccagagtttggacatagcttgctgagtgaatctgcagag
ccgttgtctgattctgccatcaccaccatggacgagcttcgtctggagctggatcagtca
gagctgaaacaacatgagctcgtggagcatgttcaacagcttggcagcgaggccacagag
ctccgtgaagtggtggctgaactgcagaggcagctggacatttcattagcagctcagtct
aaccaccaggagcttcagctcaagctggaggtattggctgagagggaacagactctagcc
caagatctggagatcctgaggggacgtgaggctgttaaagaggcagcaaatcaggaaatt
cagggcaagttagctgctgcggaaaaaaagaatgaggagctaatggctaaactagatggc
atgcttgaggagaaagggcagaggacagccagccaatttgattcagcccaaaagatacat
gaactcctggatggactgaaggaagcagagaaaggcaggatagaagctctagcacatggt
gaagagaaaaggatgcaggctgaacatctggctgaggagctcagaatgaaagagcaagct
ctgagagatgtagaagttaaaatggctgctttaacagagaagggtacaaagctgatgaag
caggcagaagaacaacgtaatgccatggataaactccaggaggagctgtcagtgagagag
aaggaagcaagcagtcttcagaaagacctacaagaccttcagcactgtctggagacgatg
gagcaacaggctgcggaagagaggaaaagggcattggaggagagagaggtgctgcagaaa
aagttgagctctttaaaagaaagcctagaaggacaagtacaaaacctaaaggcacaactc
aggagtaaagaaactgaacttatctccagtgtgaagcagatccagaacctaggggccgaa
gctgagaagatagcaggcgagaaacagtgtctgagtgggagtatagtagaactggagaca
cgcatcaaagatcagaccaagaagattgacgaatacaagcaagagtgcaccaatctcaca
gagctgaacaacaagctccttcagacagtcagtaacaacgaggagatcatgaaggagctg
aagaaaagcaaggctgtgttagaaaatgatctggctgggctgagggcctctgaaaaacag
ctcagaggtcaacttgatgacgctaaagtgacagtggatgagagggaacagcggatgcgt
gaggagaaccgcaacctggatgagaagctccaaaaagcaatcatgcagatcaaggagttg
gaaagcattgtccacaggttggagcaggagaaaaaagatctcagggaggagtgcataaag
agtaaagatgctctcacagctgcacagggagaactacataaattcactgaccagatcagg
gatctagagagtagcctagaggtggcaagatgtaacgaggtaaatctcaccttgcagcta
aaggaagaacactcacagctggaggatcgagagaggctttgtgaggagcttcaggaaaga
cttgatgaactagaggccgtggagggagaactggaggcagggaaggcagaggcagagcga
gccttggagaagcagaaggagatgatggaaaggttggaagtccagaagaaagcggtggaa
gaatctcagctggagatgagtgcctgccgtgcaaaggaagtccaggatatgaccttgaaa
gtagcactactggaggagcagctaggcctgaatgtgaaagaagtgtccaggcttcaggag
gaaatggtggacttgaaggccagactgctctgttctgaggaggagaaagtaaagatccag
actaagctggaaatcacagaggcatctaggatagagctgcagactttgacagaacaactt
aaaaagcaagctgaggagcagaaccgaaatcacgtcaatgaacttttacagtccaagcag
agcatggaggagatattatctgagctaggtgcagaaagatctgcgcttgctaaaatatca
gctgacttcgcagcagctcaagaggacctggctgtaataaagatccaaaatgaacgactg
gtcatggagaacgccgagaccagagagggactccacagggctaacacagagatggccgag
ctgggaatgaccatctgcaagctgacagctgaacgggaggaagctcaagagcgctgggca
gccgagagcacccggatccatgagctggaggagcagggtgagcgtgaaacggattgtctg
aatgccagcatcgcggcactacggcaggagaatgccagtttgcgagaggagctcctgcaa
acggagaagcttccagaaacagtgctggagctgaaggggatgctggataaatctgagagg
gagagagaagtggcacgtgaggagacggcagccatgaggtttcagatgagtacagagaat
atggcgcaccaaaaccatgtgaagagcttaaatgaagagcttgagagtttaaaagcgcag
ctgaagtctgaaagcgagaaggcatccagcctggaggtcaaagtctcagagttagaggag
atgaattcggagtgctctcgactgatgggggagaaagattcgcacatcaacaaggccgag
agccagattcgctgtggagaggatgaaatacagcagctgaaggagagagtgacatgtgtg
caggaggctctggcactagcagagacagagcgagacaagctgaaggagaagatggagaag
gttcagtctcacgctcaagccgagcaaatcaaaatggctgctgagatcgaagacctcagc
cacatcaagaccacgctggaggagcggctcatcgagctcatcagagagaaggacgctctg
tggcagaagtctgatgctctggagtttgagcagaagcagagggcggaggaacagtggtgg
ttagtggaccaagaggctacacactgtctgagctgcaagagccagttcacatggtggctc
cgtaagcatcactgcaggttgtgtgggcggatcttctgctactattgcagtaataacttt
gtgagtacgaggtctggggggaaaaaggaacgctgctgcagggagtgttacacacagcac
agtgccgtggtggagagattcacccgctctgaaatgagcagccccgccgacacacctgca
gtacacacacacacggccagcgcaccaacaactccacctgcacccccgtacatacctaca
cccagagttacagtgaccgatccgaatgtaaagcaggacgatggagtgttcgacatcatc
actgacgaggaggtaaatggactgtacgacagcgacactctctcacaaaccaccgcagag
tcacaggatggagaagcagggagccgggccccccaggacccaggtgtttctggtgatgca
gtggttgctgaggaacaggaggaaatgcccccaactgtacaagatgccgaaatccatcta
ctcaaatcaggagaacttgcctcctcagtcgtgctggacatcaccgagatcccgcagttc
ggcgacgcctctcacgagctcttcgtcaagtccagttgctacagcatcgtctccgtcacc
gtacacgagcacggccatgctgtcggctgggttttctcctccgagccaaagagcatctgc
tttagtgttgtctatagagaatccgtgaacacacctgaggagcaggccaaggttctgatc
cccctgactcggtgtaactcacacaaggagaccattcagggccagcttaaagccagaaac
cctggagtctacacactcatttttgacaactcctactccaggttcatctccaagaaagtc
agctaccacttgaccactgagaagcccgtcatctacgatggaagtgactgcccgtag
DBGET
integrated database retrieval system
