Pangasianodon hypophthalmus (striped catfish): 113531724
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Entry
113531724 CDS
T05759
Symbol
rnf8
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8 isoform X1
KO
K10667
E3 ubiquitin-protein ligase RNF8 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113531724 (rnf8)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113531724 (rnf8)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113531724 (rnf8)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113531724 (rnf8)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
113531724 (rnf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FHA
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
Yop-YscD_cpl
zf-RING_6
Prok-RING_4
zf-ANAPC11
zf-RING_10
Connexin40_C
zf-P11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
113531724
NCBI-ProteinID:
XP_026778393
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MVIMEEVAKKVSSLSPEEGEETSMQNGKIWCLKRVGKDNGWLRLFENTEVTIGRGLNVTH
QILSVSCPLMISRNHCMFKQRDQGQWTVTDNESLNGVWVNGTRISPGKPHALQQGDVVRF
GVPLDGNPVEFEYVLLQSSLNKIKDFLTKTAGTEVKALTSRPKKLKRKFGTDETEPNNPP
DSKPKLYRTSNTDKSHGLPCPTAALPDQAGPSEPSERFTQCIDSSQHLTTLKRYNENLKA
LKERMGATQKRAAELEGQEGSSLEQRQEMEVLQEQMKLLRGELNSQQELARQRMEILERS
VCEEERRLAMERNQQKEDGLKKQLEEALKEHRRVIEELKHEREGFQEVLQAKDKELEVTK
EEKERARAQKDEVVTQMTEVLENELQCIICSELFIEAVTLSCAHSFCQHCIADWRRRRDE
CPICRQPIVSQARSLVLDNCIDRMVENLSTVMRERRTALISQRKGLRKVPSVGLVVIQDD
SDSDPSIQPSNTAKATW
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggtaattatggaggaggttgcaaagaaagtctcttccttatcgcctgaggaaggagaa
gaaacctccatgcagaatggtaaaatatggtgtttgaaacgagttggtaaagacaacggc
tggctacgactcttcgaaaatactgaggttactattggacgtggcctgaatgtcacccat
cagattctgtcagtgagttgtccactgatgatctccagaaaccactgcatgtttaagcag
agagaccagggccagtggacggtgactgacaatgagagcctaaatggagtatgggtgaat
ggtactcggatatctcctgggaaacctcacgctctgcagcagggtgatgttgtgcgattc
ggcgtcccgttggatggcaacccggttgagttcgagtatgttcttctccaatccagcctt
aacaaaattaaagatttcttgacaaaaacagctggaacagaagtcaaagctttgacatcc
agaccaaaaaagttgaagcgaaaatttggtacagatgagacagagccgaacaacccacca
gactcaaaaccgaagctctatcgcacgtccaacacagataaatctcacggcctgccgtgt
cccacagcagcactccctgatcaggctgggcctagtgaaccatctgagcgcttcactcag
tgtattgacagcagccagcatctgactaccttaaaacgctacaatgagaacctgaaagcg
ttgaaggagcgcatgggggccacacagaagcgagcggctgagttagaggggcaggagggc
tcaagtctagagcagcgtcaggaaatggaggttctgcaggagcagatgaagctgctacgc
ggcgagttaaactcacagcaggagctggcacggcagcgcatggagatcctggagaggtcc
gtgtgtgaggaggagagacgactggcgatggagagaaaccagcagaaagaagatggcctg
aaaaaacaactagaggaggctttaaaagagcaccgcagagtgatagaagagctcaaacat
gaaagggagggatttcaagaggttcttcaggccaaagacaaggagctggaagttaccaag
gaggagaaagagcgcgccagagctcagaaggacgaggtagtcacacagatgacagaagtg
ctggagaatgaactgcagtgcatcatttgctctgagctcttcatcgaggcagtgacgctg
agctgcgctcacagtttctgtcagcactgtatcgcagactggcggagacgcagagacgag
tgtcccatctgcaggcagcccattgtgtcgcaggctcgctctctggtgctggataactgc
attgaccgcatggtggaaaacctgagcactgtgatgagggagaggagaacagcactcatc
agccagaggaaaggtctgcgtaaagtaccttctgtcggactggtagtgatccaggacgat
agtgacagcgatccatcgattcaaccatctaacacggcaaaggcaacctggtga
DBGET
integrated database retrieval system
