Pangasianodon hypophthalmus (striped catfish): 113531916
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Entry
113531916 CDS
T05759
Symbol
afdn
Name
(RefSeq) LOW QUALITY PROTEIN: afadin
KO
K05702
afadin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04520
Adherens junction
phyp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113531916 (afdn)
04530 Tight junction
113531916 (afdn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
PDZ_6
PDZ_2
ASPP1-2_RA
Motif
Other DBs
NCBI-GeneID:
113531916
NCBI-ProteinID:
XP_026778704
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MRFYFQDRVAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RKLDLDEKPLVVQLNWNKDDREGRFVLKNENDIIPKKIQSNGPEKEKEGVIQNFKRTLSK
KEKKKEKKRDKEACARIPDGDEHALNREDGENSRLAAEVYKDMPETSFTRTISNPEVVMK
RRRQQKLEKRMQEFRSGDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVAEALE
KYGLEKENPREYCIARVVHCDDKPVKETILEDSECPLQIFREWTSDKEALVFQLKKRPPD
FMPKKGLKPGDRMGSLHGALPPEKLPYLVELSPGRGNHYAYYAYRQHEDGSDSRDKPKLY
RLQHSVTEVGSDRSEDGNIQVSRLNQRVSVPETAFDLHGDIHSGAALPTSKSSGKLDMDR
PGNVGERGMVKPMIRTEPDFAKHDGRPHDSPELTLPASIEFRDNSEDAFLSAIINYTNSS
TVHFKLSPTYVLYMTCRYVLSSHYRPDMSASERTHKVIAIVNKMVSMMEGVIQEIPEGDQ
KQKNIAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFNNASQSWVSVSS
EDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTESDSGLCSHYWGAIL
RQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAMQDVQNINNTCFKLNSLQLN
ALMSNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDG
YSCDVVRNIPNGFQEFLEPLCQRGFCRLTPHPRAPGTWTVYFEGADCDSHFSADNSDLPM
RKEPEIVTVTLKKHNGMGLSIVAAKGAGQEKLGIYIKSVVKGGAADMDGRLAAGDQLLSV
DGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMPRASDRGRMDK
GKARPKSEGFELYNNSVQNGSPESPQGNWDSYPEQKRDERLLKNRADHRSSPNVANQAQS
PGGKPVYPGAPGKITSVSTGNLCPDEEPSPPRPEAYPIPTQTYPRDYFTFPASKSQDRMG
PGPGQVWQGGEPEPLPPMDEHHHNNMAMQRVARSQEELCDVPTRYPAERMRQDDLLHLQQ
QQREAEYQRGGDPWNHQVSSSVESSTSSQEHLNNYSSSSKAQSNHKSAAGRWKTPGAPHP
GPVGVSQPSRTDLPPPPPPPPPAHYDYDPQADMPLPPPPSVTQQQAAADRKKREEQQRWY
EKEKARLEEERERKRREQERKLGQIRNPAMPPPVLHNSSQHQQMPPPQQIPQPYMPPAQP
PQTQLPRPEKLPTLPRAPPPPAPQDTVIRDLQPQQQPRTIERRDLQYITISKEELSAADS
LSPDPWKRDAREKLEKQQQLHIVDLLDKEIQDLQAKPERTAEENDRLRKLMLEWQFQKRL
QESKQSEEDEEEEDDEDVDTVLIMQRLEAEKRARQTAVPAISVLDLLQDEERRRKQQLEE
IRKREAEERAKQEEERRRREEERARREAEEKRRQEEEYYTRLEAERRRQHEEAERKLLTP
EEPXVPPTPPQRNTSYLKTQVVSPDTLYTAKFVSYNDEEEEEEDDAGLAGQVKLSATRKS
YGDLVPAQKPPPPPTARKPRPLSDGIFLSSSFQLPAEANANSTAPKAGQAPPPPTKPKGF
NSYTGNTTGVVGSGEVFKDPREKWTKG
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgcggttttatttccaggacagagtggctgggaactttgccaccaagtgcatccgtgtg
tccagcacagccaccacgcaggacgtgatcgagacgctggccgagaaattccggcccgac
atgaggatgctctcctcgcccaaatactcgctgtacgaggtccacgtcagtggtgaagaa
cggaagctggacctggacgagaagcccctggtggtgcagctcaactggaacaaagacgac
agagagggacgcttcgtcctcaagaacgaaaacgacatcatcccaaagaaaatccagagc
aacgggcctgagaaagagaaagaaggcgtgatccagaacttcaaaaggacactgtccaag
aaagagaaaaagaaagagaagaagagagataaagaggcctgcgcccggattcctgacgga
gatgagcacgcactgaacagagaggacggagagaactcgagactggcagcagaggtgtac
aaggacatgcccgagaccagcttcacccgcaccatctccaaccccgaggtggtgatgaag
aggaggagacagcagaagctggagaagaggatgcaggagttccgcagcggagacggacgg
cctgactcaggggggacgctgaggatctacgcagacagtctgaagcccaacatcccctat
aagaccatcctgctctccaccactgacacggctgacttcgctgtggccgaggctctggag
aagtatggcctggagaaggagaaccccagagagtactgcattgctcgggtggtccactgt
gatgataaacctgtaaaagagaccatactggaggactcagagtgccctttacagatcttc
agagaatggaccagtgataaagaggcgttagtgttccagctgaagaaacgtcctcctgac
ttcatgcctaagaaaggtctcaagccgggcgacaggatggggtcgctgcatggagcgcta
cctcccgagaaattaccctacctggtcgagctgagtccagggcgagggaatcactatgcc
tactacgcttatcggcaacacgaagatggttcagactccagggataagcctaaactgtac
cggttacagcacagcgtgactgaggtcggctcagaccggagtgaagacggcaacatccag
gtgagcagattaaaccaacgtgtgagtgttccagagacggcctttgacctgcacggggac
attcacagcggcgctgcactcccaaccagcaagagctcagggaagctggacatggatcgc
ccaggtaacgtcggggagcgaggcatggtgaagcccatgatccgcacggagcccgacttt
gcaaagcatgatgggaggcctcatgacagccccgagctcacgctgccggccagcatcgag
ttcagggacaactctgaagatgctttcctgtcggccatcatcaactacaccaacagctcc
accgtgcactttaagctgtcccccacctacgtgctgtacatgacctgccgctacgtgctg
tccagccactacagacccgacatgagcgcgtcagagcggacgcacaaagtcatcgccatc
gtcaacaagatggtgagcatgatggaaggagtgatccaggagattcctgaaggtgaccag
aagcagaaaaacatcgctggcgctctggccttctggatggccaacgcctcggagctgctc
aacttcatcaagcaggacaaagacctgagccgcatcacgctggacgcccaggacgtcctc
gcacacctcgtccagatggccttcaacaacgctagtcagtcatgggtatctgtgagctca
gaggacgtgctgcacacactgacaggcgccatgtcgctgctgcggcgttgccgtgtgaac
gcggccctcaccatccagctgttctctcagctcttccacttcatcaacatgtggctgttc
aacaagctggtgactgaatcggactcggggctgtgctcgcactactggggcgccatcctg
cgccaacaactcagccacatcgaggcctgggctgagaaacagggcctggagctcgcggca
gactgccacctcagccgcatagtgcaggcaacaactctcctcaccatggacaagtacgcc
atgcaagacgtccagaacatcaacaacacgtgcttcaagctcaactctctgcagctcaac
gcactcatgagtaactaccactgtgcgccggacgagccctacatccccccagagctgatc
gatcacgtggtggccgtggcggagaacacggcggacgagctggctcgcagcgacggccgg
gaggttcagctggaggaggatcctgacctacagcttcccttcctgctgccggaagacggc
tactcctgcgacgtggtccgcaacattcccaacggcttccaagagttcctggagccactg
tgtcagagaggtttctgccgtctgacccctcatcctcgtgctcccggaacctggaccgtc
tactttgaaggagccgactgcgacagccacttctccgcggataactctgacctgccaatg
aggaaggaacctgaaatcgtgacggtgacgttgaagaagcacaatggcatgggcctcagc
atcgtcgctgccaagggtgctgggcaggagaaacttgggatttacatcaagtctgtcgtc
aaaggaggagctgcagacatggatggccgtctggctgctggagatcagttgctcagcgtg
gatgggagaagtctagttggactctctcaggagagggcggcggagctgatgactcgaaca
ggctcggtggtgactctggaggtggccaaacagggggctatttaccacggcctggccacg
ctgctcaaccagccgtctcccatgatgccgcgggcatcagaccggggccgtatggataaa
ggcaaagccaggccgaagagcgagggcttcgagctctacaacaactctgtgcagaacggc
tctccggagagcccacaggggaactgggactcgtaccccgagcagaagagggacgagagg
ctgctgaagaaccgcgcagatcaccgctccagccccaacgtagccaatcaagcccagagt
ccagggggaaagcccgtgtatccaggagcgccgggaaaaatcacctctgtctccacgggc
aacctgtgtcctgatgaggaaccatccccaccccgtccggaggcataccccatccccacg
cagacataccccagggactacttcaccttcccagcctccaaatctcaggacaggatgggg
cctggacccgggcaggtctggcagggcggcgagcctgagcctcttcctcccatggacgag
catcaccataacaacatggctatgcagcgggtagcacgctctcaggaggagctgtgtgac
gtgcccactagatacccagccgagcgaatgcgccaggatgacctgctccacctgcagcag
cagcagcgggaggcagagtaccagcgtggtggagatccctggaaccaccaggtctcctcc
tctgtggagtccagcacttccagccaggagcatctcaacaactactcctcctccagcaaa
gcccagagcaaccacaagagcgccgctggccgctggaagacccctggagcgccccatccc
ggcccggtgggtgtgtcccaaccctctcgtacagacctgcctccgcctcctcctccgcct
ccacctgcgcactatgattacgatccgcaggctgacatgcccctacccccacctccctcc
gtcacccagcagcaggccgcagccgaccgcaagaaacgggaggagcagcagcgctggtat
gagaaggagaaggcgcggctggaggaggaacgcgagaggaagaggagggagcaggagagg
aagctggggcagattcgcaaccctgccatgcctccacccgtcctgcacaacagcagccag
caccagcagatgcccccacctcaacagatcccccaaccctacatgcccccagctcagcct
ccccagacgcaacttccccgccctgagaaactgcccactcttcctcgagctcctcctcct
cccgcccctcaggacacagtgatccgggacctgcagcctcagcagcagcctcgcaccatc
gagaggcgcgacctgcagtacatcaccatcagcaaagaggagctgtctgcggccgacagc
ctgtcgccggacccgtggaagagggatgccagggagaagctggagaaacagcagcagctg
cacatcgtcgacctgctcgacaaggagatccaggacctgcaggccaagccggagcgcacg
gctgaggagaacgatcgcctgcgcaagctcatgctggagtggcagttccagaagaggctg
caggagtccaagcagagcgaggaggacgaggaggaggaggatgatgaagacgtcgacaca
gtgctgatcatgcagaggctggaagcggagaagagagcacggcagactgctgtcccagca
atctctgttctagacttgctgcaggacgaggagcggcgacggaagcagcagctggaggag
atccgtaagcgcgaggcagaggaacgagccaagcaggaggaggagagacgccggagagaa
gaggagcgagccagacgagaggccgaggagaagaggagacaggaggaggagtactacacc
cgcctggaggcggagaggcgccggcagcacgaggaggccgagcgcaagctgctgacgcca
gaggagcctnnggtccctccgaccccgcctcagagaaacacctcgtacctcaaaacccag
gtcgtctcccccgacaccttatacactgccaagtttgtctcgtacaatgacgaggaggag
gaggaggaggatgatgcaggcttagcaggtcaggttaagctctctgctacgcggaagtcc
tatggcgaccttgtgcctgcccaaaagcccccgccgccgcccactgcgcgcaagccccgc
cccctctcggacggcatctttctgtccagctcattccagctgcctgcagaggccaatgcc
aacagtactgcgcccaaggcagggcaagcccctccccctcccaccaaacccaaagggttt
aattcgtacactggaaacacgacgggagttgtaggatcaggggaagttttcaaggaccca
cgagagaaatggacaaaagggtga
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integrated database retrieval system
