Pangasianodon hypophthalmus (striped catfish): 113532233
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Entry
113532233 CDS
T05759
Symbol
optn
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
phyp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113532233 (optn)
04137 Mitophagy - animal
113532233 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113532233 (optn)
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113532233 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113532233 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
113532233 (optn)
Xenophagy
Cargo receptors
113532233 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
zf_C2H2_10
NEMO
DUF1664
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
113532233
NCBI-ProteinID:
XP_026779303
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MASGSPILNGDLSHPTQSQSTGAPHVEETLQQMNILIKENRELKDTQTLEHPDLPSDSCT
EALKQTNLTMKERFEGLSAWKEKQKEERGFLEKRLEEAKQRIQTLDSENELLKKRVQEME
KQHSGGEQGEGGGLQAKLEALMSQIVRLQAEKSDLVAINSELQLKMSQTSPEDSFIEIRI
AEGEMNVTRDLPPQKDFSASSTIKSDMAGSRLESEEQTVSQLLQSLRLETQQKEQLQHQI
QAAQKRIAELELKEPNSESGTQTSLPCVTATQEAQSKSSQEETAKSASEVENLKTQLMNL
FKELQQAQSKLDQAENMKKNFQDRCKELEQDLGTLKTQLGEREQLQAENDRLKVQLESMQ
AANKLEQKKVQEERNDLAQLKDAYTKLFEDYEELQQENKKRQGTVSREEYGELQSRMVAA
EQALADKQQKIDIMKQELCEKDKELETISVFKAQAEVYSSDFYAERAAREKIHEEKERLA
AQLEFFKKQNIQLQDEVESMGRQSMSEMQRRHVPRGANPGDSSPHHHLQGGRVDWQQQVN
IPEHACPKCGEVLPDLDTLQIHIMDCII
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggttcccccattctgaatggggatttgtctcacccaactcagtctcagagc
actggagcaccacatgtagaggagacgctccagcagatgaacatcctcatcaaggagaac
cgggagctcaaagatacacaaacactcgaacaccctgaccttccatctgactcgtgcaca
gaagccctgaaacagactaatctgacaatgaaggagaggtttgagggtctgtctgcctgg
aaggagaagcagaaggaggagagagggttcctggagaagcgactcgaagaggccaagcag
agaatccaaactctggacagcgagaacgagctcctgaagaaacgtgtgcaggagatggag
aaacagcattctggtggagagcagggtgaaggtggtggtctgcaggccaagctggaggcg
ttaatgagtcagatcgtccgcctgcaggctgagaagagcgacctggtagccataaactct
gaactgcagctgaagatgagccagacttctccggaagattccttcattgagatccgcatt
gcagagggtgagatgaacgtgaccagagatttacctcctcagaaagacttttctgcatct
agcacgattaaatccgacatggctgggtctcggctggaatcagaggagcagacggtgagt
cagctcctgcagtctctgagactcgagacgcaacaaaaagagcaactgcaacaccaaata
caagctgcacagaagaggattgcagaattggagctgaaggaacccaacagtgagagtgga
acgcagacgtctctgccctgtgtgaccgctacacaggaagcgcagagcaagagctctcag
gaggaaacagccaaatctgcctctgaggtggagaacctgaagactcagttgatgaatttg
tttaaagagctgcagcaggctcagagtaaactggaccaggcggagaacatgaagaagaac
ttccaggacaggtgtaaggagctggagcaggacctgggcacgctgaagactcagctcggg
gagagagagcagctgcaggctgagaacgacagactgaaggtgcagctggagagcatgcag
gctgccaacaaactggagcagaagaaggttcaggaggaaaggaatgatttggcgcagctg
aaggatgcgtacaccaagctgtttgaggattatgaagaacttcagcaagagaataagaaa
cgacagggaactgtatcacgggaggagtatggtgagcttcagtccagaatggttgcagca
gaacaagctttagcagacaagcagcaaaagatcgacataatgaagcaagagctgtgtgag
aaggacaaagagctggagaccatctctgtgtttaaggctcaggcagaggtttattcctca
gacttctacgccgagcgagctgcgagggagaagattcacgaggagaaagagcgcctggct
gctcagctggagtttttcaagaagcagaatatccagctacaggatgaggtggagtcaatg
ggcaggcagtctatgagtgagatgcagaggagacatgtgcctcgtggtgcaaacccaggc
gattcttctccacaccatcacctgcagggtggcagagttgattggcagcagcaggtgaat
attcctgagcatgcttgtcctaaatgtggggaagtccttcctgatctggacactctgcaa
atccacatcatggactgcatcatctga
DBGET
integrated database retrieval system
