Pangasianodon hypophthalmus (striped catfish): 113532324
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Entry
113532324 CDS
T05759
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
113532324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113532324
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
113532324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
113532324
NCBI-ProteinID:
XP_026779461
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MDDDFEWRREQRRQKREEMRLEAERMAYRRNEEDEEEAARERRRRARQERMRSKEGEEVA
NPAESVGLNSHSVTVTETVSSSELSSGRAGEGDEEEQALLERLAKREERRQRRMKEALDR
QKQLESVDAPSYSTYSVESSSTTSYRAFNNQEEEPALNSKEEVKEEVKEEVIPQKEVVEE
KPRRSYLKEQESTEEKAKIEDEGGTGQDAVRPSEKCKTLNEDLADSTVISKQEVEEDAAG
VDEDIEEVEGNELEMEDEDAGRKSKQQNGGVYEDSKHKKVERTQSRGSVHSSEGPAAEEG
DDGEQTRLEAERKLEELKRRRDETENEEFERMKQKQQEAEAELEELKKKREERRKVLEEE
EKLKKQEEAEKKAREEEEKRRMKEEIERRRAEAAERRQKVGEEVDGEASKPFKCVSPRGS
SLKIGERAEFLNRSAQKSSVKMSHSPVVSKIDNRLEQYTTAVQSNKEVRSPRVAAIDLPV
VSDGVRNIKSMWEKGNVFSSTISTPSSNKDAAGIKVGVAGRINDWLNKTPEASKTPGGRP
VDLKPGDVTGKRSLWENKSSSATKVTSRGESKSVANGMGH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgattttgagtggcgcagggagcagaggagacagaagagagaggagatgcgg
ctggaagcagaaaggatggcctaccgccggaatgaggaggatgaggaagaggcagctcgt
gagcgtagacgaagagcacgccaagagcgtatgcgaagcaaggagggcgaggaggtagct
aacccagccgagagtgtggggctgaacagccacagtgtcacagtaacagagacagtgtcg
agctcagagctgagctcaggcagggctggcgaaggagatgaggaggagcaggccctgctc
gagcgcctggccaagcgggaggagcgcaggcagaggaggatgaaggaggcactggacagg
cagaaacagctggagtctgtcgatgctccatcctacagcacctacagtgtggagagctcc
tctaccacctcttaccgagcattcaacaaccaggaggaggagccggcactcaacagcaag
gaggaggtgaaagaggaggtgaaggaggaggtcattccacagaaggaggtggtggaggag
aagccacgcaggtcttacttgaaggagcaggaatccactgaggaaaaagctaaaatagaa
gatgagggtggtactggtcaggatgctgtgcgtccaagtgaaaaatgcaagactttaaat
gaagacctagctgattctacagtcatttcaaagcaggaagtggaggaggatgcggcagga
gtcgatgaggatatagaggaagtagaggggaatgagttagagatggaggatgaggacgca
gggaggaagagcaagcagcagaacgggggagtgtatgaagacagcaaacacaaaaaagtg
gagagaacccagagccgtggcagtgtgcactcttctgagggtccggcagcagaggaaggg
gacgacggggagcaaacacgcctggaggctgagaggaagctggaggagctgaagaggagg
agagacgagacggagaacgaggagtttgagaggatgaaacagaagcagcaggaggctgag
gctgagctggaggagctgaagaagaagagggaggaaaggaggaaggtgctggaggaagaa
gagaagctgaagaagcaagaggaggctgagaagaaggcaagagaggaggaggagaagagg
aggatgaaggaggagatagagaggaggagagcggaggcagctgaacggaggcagaaggtc
ggggaagaggtagacggagaagccagcaagccctttaagtgtgtgagcccccgaggatcc
tctctgaagattggtgaaagggcagaattcctcaacaggtcagcacagaagagttccgtt
aagatgtctcactctcccgtggtgtcaaagattgataacagattggagcagtacaccaca
gctgtgcagagtaataaagaggtgcgctcaccacgtgtggctgcaatcgacctgcccgtg
gtttctgatggtgtgcggaacattaagagcatgtgggagaagggcaacgttttcagttcc
accatcagcacaccctccagcaacaaggatgcagctggaataaaggtgggcgtcgcaggc
cgcatcaacgattggctgaacaaaacaccggaggcgagcaaaacaccaggaggaagacct
gtggacctgaaacctggcgatgttactggcaagcgcagtctatgggaaaacaaaagctcc
tctgctaccaaggtgacaagcagaggagagagcaaatctgttgccaatggaatgggtcat
taa
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