Pangasianodon hypophthalmus (striped catfish): 113533260
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Entry
113533260 CDS
T05759
Name
(RefSeq) protein bicaudal D homolog 2-like isoform X1
KO
K18739
protein bicaudal D
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113533260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113533260
04131 Membrane trafficking [BR:
phyp04131
]
113533260
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
113533260
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113533260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BicD
HALZ
ATG16
DUF1759
OmpH
GLE1
Motif
Other DBs
NCBI-GeneID:
113533260
NCBI-ProteinID:
XP_026781065
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MSTEEMLAEITRLTCELHETTREKIQAAEYGLAVLEEKQALKQQYDELESEYDSVRQELD
QLREAFGQAHSNQRKVAADGESREESLLQESACKEAYYEQRVQELQTELRQARNTLTNTQ
SENERLSTITQELRENSQMVELQRSRLRDDIKEYKFREARLLQDYSELEEENIALQKHVS
VLKQSQVEFEGLKHEIRRLEEDTQFLNSQLEDAIRLKEIAEKQLGEALETIKTEREQKAA
MRKELSQYMNIGDSMYHNSLSISLDGLKFSEDVMIEPNNDDPIHGYENGFDKIPDAEDNR
MSTPKKDQLFHPAPSLVEDLLSELNLSEIQKLKQQLVQVEREKVTLLSTLQDSQKQLEQA
HGALSEEHEKVSRLTENLNAMRKLHASKERQSALDNEKERDSNEDSDYYEVDINGPEILE
CKYKVAVSEVGHLKEELKTLKSEYSACRSRLEDERSRLESQVASLRSELSTLECSSRAER
EQLARMEKELRRASEAAGESQGSLSVAQDELATFSEELANLYHHVCMCNNETPSRVMLDF
YREGKANAGTNSSNRGSPEGRGRRSPILLTRGLFPTPEAESPSPVSSPVADPRKEPMNIY
NLVAIIRDQIRHLQLAVDRSTELSRQRLASAELGPSADRDHEASVEEILKLKSLLSTKRE
QIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRA
MFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEDLEFDNEQTRR
GGASSRTKSASSRAKAAHNPTQSHVSPPLAATCGGRGEPNGLLGTPVVFCSEKYKIYCE
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggaggagatgctggctgagatcacgcgcctcacctgcgagctgcacgagacc
acgcgcgagaagatccaggcggcggagtacgggctcgcggtgctggaggagaagcaggcg
ctcaagcagcagtacgacgagctggagagcgaatatgacagcgtccgacaagaactggac
cagcttagagaggcgttcggacaggctcactccaaccagaggaaagtggcagccgatggt
gagagtcgggaggaatctctgctccaggagtcggcatgtaaggaggcgtactacgagcag
cgtgtgcaggagctacagaccgagctcaggcaggctcgtaacaccctcaccaacacacag
tcagagaacgagcgcctgtccaccatcacccaggagctcagggagaacagtcagatggtg
gagctgcagaggtcccgactccgtgatgacatcaaggagtacaaattccgcgaggctcgt
ctactgcaggactacagtgagctggaggaggaaaacattgcactgcagaaacatgtgtct
gtgctcaaacagagccaggtggagtttgagggcctgaagcacgagattcgtcgcctggag
gaggacacgcagttcctgaacagccagttggaagatgccatccgtctgaaggagatagcc
gagaaacagcttggagaagctctggaaaccatcaagactgagagggagcagaaggcggct
atgaggaaggaactgtcccagtatatgaacatcggggactccatgtaccacaattccttg
agcatctctctggatgggttgaagttcagcgaagatgtgatgatcgagcccaacaacgac
gaccccatacacggctatgaaaacggctttgacaagatccctgatgctgaagataaccgg
atgtccacgcccaaaaaggaccagctgttccatccagcccctagcctagtggaagacctg
ctgagtgaactcaacctctccgaaatccagaagcttaaacaacaacttgtgcaggtggag
cgggagaaggtgacattgctgtcaacattgcaggattcacaaaagcagctggagcaggcc
cacggggctctgtcagaggagcacgagaaggtgagccgcctcactgagaatctgaatgcc
atgcgcaagcttcacgccagcaaggagcgccagtcagccctggacaacgagaaggaacgt
gacagcaatgaggacagcgactactatgaggtggacatcaacgggcccgagatcctggag
tgcaagtacaaggttgctgtttccgaagtgggtcacctgaaagaggagctgaaaaccctg
aagtctgaatactctgcttgccggtcgcggcttgaggacgagcgtagccgattggagagc
caggtggcgtcgctccgctctgagcttagcaccctggagtgcagcagccgtgcagagcgt
gagcagctggcacggatggagaaggagttacgccgggccagtgaggcagccggcgagagc
cagggaagcctgagcgtggcacaagacgagctggccacgttcagtgaggagctcgccaac
ctttaccaccatgtttgcatgtgcaacaatgagacgcccagccgagtcatgctcgacttc
taccgcgagggcaaagccaacgctggcaccaacagcagcaatcggggcagtcctgagggc
cgtggccgtcgttcacccatcctgctgacgcgtggcctcttccccacccctgaggcagaa
tctccatcccccgtctcttccccagtggctgacccacgcaaggaaccaatgaacatctac
aacttagtggccatcatccgtgaccagatcagacacctgcaactggccgtggaccgcagc
acagagctgtctcgtcagcgcctggcctctgccgagcttggtccctccgctgaccgtgac
cacgaggccagtgtggaagagatccttaagctcaagtctcttctcagcaccaagagagag
cagatcgccaccttgagaactgtccttaaagccaacaaacagactgctgaggtggcactg
gccaacctgaagagcaaatacgagaatgagaaggccatggtgactgagacgatgatgaag
ctacgcaatgagctcaaagccctgaaggaggatgctgccaccttctcctcccttagagcc
atgtttgccacccgctgtgacgagtacgtcactcagctggacgagatgcagaggcagctg
gcagcggctgaggatgagaagaagaccctgaactctctcctacgcatggccatccagcag
aagctggccctcacgcagcgtctagaagatctcgagttcgacaacgagcagacgcgccga
ggtggagccagcagcaggaccaagtccgcctcctcccgagccaaggccgctcacaaccct
acgcagtcacatgtaagtccacccctcgctgccacctgcgggggtcgcggcgagcccaac
ggcctcctgggaacgccagttgtgttctgcagcgaaaagtacaagatctactgcgaataa
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integrated database retrieval system
