Pangasianodon hypophthalmus (striped catfish): 113533467
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Entry
113533467 CDS
T05759
Symbol
gigyf2
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 2
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113533467 (gigyf2)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113533467 (gigyf2)
Surveillance factors
Other surveillance factors
113533467 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
113533467
NCBI-ProteinID:
XP_026781429
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MRGHVTLSQPSCGYAKSDNSHPNSSLSVKSRDFLGKMAETQTLNFGPEWLRALSGGGGSS
SVASPPLSPALPKYKLADYRYGREEMLALYVKDNKIPVDLHDKEFLPILQEEPLPPLALV
SFTEEEQRNFSMSVNSAAVLRLTGRGGGVVAGAPRGRSSSRGRGRGRGEGGFYQRSFDDV
EGGFGRGGREMHRSQSWEERGDRRFEKPSRKDPDGAPAHFQLNHLRANYEDGGTGLVRKH
DFTRSESENWRLSRDEQNGEDEEGGGWRLAGSRRDNERWCPPSPDGPRLAGGWREQPDQR
RRLPLDSRGEEERGGGYRRPRSASGSMEDERDALPEWCLEDAEEETGTFDSSGAFLPLKK
APAEPILEEAELEFRPLEEGEECSEKDENEAEHPNEPESKRQTARHDDAGKSEEASPPAA
PLPPAPEPVVSTSLPSSQSERVEEPERATAPEIRPAPAPLHSALPISIPHSTNTLSTLTD
LPAPSLPVLPTQQIVSHPKPVEVPVAVPDALPFPKSIMSPIGQIAAMATDADEDEGLKHF
EQEAEKMVAYLHDGGVDDERLGAKSAERPKVGCLPPSHEAALKWYYKDPQGEIQGENXHC
KMACSPLKPAFQXRGAWCRTSXLYDCKKQCQKKNSTMDEXLIKVKNRVPSCFTPVYASIS
LRLVCVCVKGDADQERIKRQQELNALSIYQLQQLQYQYIIRQQQYAQALAQQKAVLSSAA
PPTQQQQQLNLFLQQALKLRTPEQQQSLLPPVTRSMSVPDSGSIWDIQNPPTQASCTANI
QPAAPSTWEGTSVWDLPIDTIPQPSIEQMQLEKAKAAKLELELRVKREEEERKRLEEVLR
AQQEEERKRLEEEELARRKQEEALRRQREQEESQRRQKEEEERLAREEELRRLEEKRREE
EERRQREEFLRKQEEERRKQEELEAQRRREEEAAALARQQQEEQKRREQELQRQQELQRQ
QELQRQQELQRQKELLRQQELQRQQEAQRQQEAQRQQELQRQRQQQQEALRRLQQQQQQQ
QLAQMKLPSSSKWGQQSASTSSLTQTQNTLSLSEIQKLEEERERLAREEQRRQQQELQRQ
QQQQQQQQPQSKLSGWGSVAKQPAATKSLLEIQQEEAQQMKQRKEQQQAVVMQQNRTQNR
VALTSSVWGSVSNTSHWGSDSSSIWGDTQNSNLGFWDDAVKETAPPPTTRKNNSQKNKGN
VNLSNSNSGKSSKKVEEEEKLLKLFQGANKTQDGFMQWCEQMLHTLNTANNLDVPTFASF
LKEVDSPYEVHDYVRAYLGDTPQAKDFAKQFLERRAKQNINQQKPLQSQQPKNQQDSVWG
VNQTVSQPVFQSNHSTKQQQPRFETVTSGKKKKKQKMVRADPSLLGFSVNASSERLNMGE
IETVEDF
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtcatgtgacactttctcagccatcttgtggatacgcaaagagcgacaactcg
cacccaaactcatcgctgtcagttaaaagcagagactttctaggaaaaatggcagaaacc
cagacacttaactttggaccagaatggctccgtgctttgtctggaggaggtgggagcagc
agtgtggcttctccaccactctcgcctgcattgccaaagtataaacttgcagactatcgc
tatgggagagaggagatgcttgcactttatgtaaaggataacaagattcctgtagatcta
catgacaaggaatttctgcctattttacaagaggagcccctacccccgctggccctagtc
tcatttacagaggaagaacagaggaatttctccatgtcagtaaacagtgcagcagtgctg
cgcctgaccggacgaggaggaggtgtggtagcaggggcaccacgaggtcgaagttcttca
cgtgggcgcggtcgaggaaggggggaaggagggttttaccaaagaagttttgatgatgtg
gagggtggctttggtcgtggagggagagagatgcatcgttctcagagctgggaggaaagg
ggagacagaagatttgaaaagccaagtcgaaaagatccagatggcgctccagcccacttt
cagctcaaccacttgcgggcgaattacgaggatggtggtacaggcctggtgcgaaagcac
gatttcacgcgctctgagagtgagaattggcggctgtcgcgtgatgaacagaacggtgag
gatgaggagggtggcggttggcgtctagcaggctcccgccgggataacgagagatggtgc
ccaccgagtccagatgggccacgcttggctgggggatggcgggaacagccagatcagcgg
cggcgcttgccattggactctcgtggggaggaggagcgtggtggggggtacagacggccc
cgctcggccagtggcagcatggaggacgagagggacgcactgcctgagtggtgcctggag
gacgcagaggaggagacgggcacgtttgactcatctggagcttttctcccactcaagaaa
gctcctgcagagccgattcttgaggaggcagagctagagttccgtccactggaggagggt
gaggagtgcagcgagaaagatgagaatgaagcagagcatcctaatgaacctgaaagcaag
cgccagactgccaggcatgatgatgctggcaaatcagaagaggcttctccacctgccgct
ccgttaccaccagctccagagccagttgtgtctacatccctgccctccagccagtcagag
agggtggaggagcctgagagagcaacagcacctgaaatcagacctgctccagctccctta
cactcggctctgcctatatccataccacacagcacaaatacgctcagcacactaacagat
cttccagccccgtccctccctgtgttgcccacccagcaaatcgtatctcatcccaagcca
gtggaggtgccagtggcagtacctgatgcactccctttcccaaagagcatcatgtcgccc
attggccaaattgcagccatggccacagatgcagatgaggatgagggtctcaaacatttt
gagcaggaagcagagaaaatggtggcttatctacatgatggtggtgtggatgatgagcgt
ttgggggctaagagtgcagagcggcccaaagttggctgcctgccaccatctcatgaggct
gctctcaagtggtactacaaggatcctcagggagagattcaaggtgaaaactagcactgc
aaaatggcatgctcacctttaaagccagcttttcaataaaggggtgcatggtgtagaaca
agttagttgtatgattgcaaaaaacaatgtcagaagaagaacagcactatggatgaatga
ctaattaaagtaaaaaatcgtgttccttcctgttttactcctgtgtacgctagtatatca
ctgagacttgtgtgtgtgtgtgtaaagggagatgctgatcaggagaggataaagagacag
caggagctaaatgctctaagcatctatcagcttcagcaactgcagtaccagtacataatc
aggcagcagcagtatgctcaagctctagctcagcaaaaagctgtgctcagttcagctgct
cctccaacacagcagcaacagcaacttaacctgttcctgcaacaagccctcaagctcaga
actccagaacagcagcagagccttttgcctccagtgacgcgttccatgtccgttccagat
tcggggtccatttgggatatacagaacccacctacccaagcatcctgtacagcaaacatt
cagccagcagctccaagcacatgggaaggcacaagtgtgtgggatctgccaatagacacc
atacctcaaccatctattgaacagatgcaactggagaaggctaaagctgctaagctggag
ctggaactcagagtcaaacgagaagaggaggagcggaagcgtctggaggaggtgctgcgg
gcgcagcaggaagaagagcgcaaacgtctggaggaagaggagctggctcgacggaaacag
gaggaggcactaaggaggcaacgggagcaggaggaatcacagcggcgccagaaggaggaa
gaggaacgcctggctcgggaggaggagctccgcagactagaggagaagagaagagaagag
gaagagaggaggcaaagggaagaattcctccgtaaacaggaagaggaacggaggaaacag
gaggaactggaggctcagaggaggcgagaggaggaggcagcagcattggctcgacaacag
caagaagagcagaagaggagggagcaggaactccagaggcagcaggagctccaacggcag
caggaacttcagaggcagcaggaactccaaaggcagaaggagcttttaaggcagcaggaa
ttgcagaggcagcaagaggctcagaggcaacaagaagctcagaggcagcaggagctgcag
agacagagacagcagcagcaggaggccctgcgccgactccagcaacaacagcaacagcag
cagctggcccagatgaagctcccatcttcttccaagtggggacagcagtctgcctcgaca
tcttccctcacccagacacagaacacactgtctctcagtgagatccagaaactagaagag
gagagagaacgactagctagagaggagcagcgacgccagcagcaggagctccagaggcag
cagcagcagcagcaacaacagcaacctcagtctaagctttctggctggggcagtgtggcc
aaacagcctgcagccactaaatcccttctggagattcaacaggaggaggctcagcagatg
aagcagagaaaagagcagcagcaggctgtagttatgcagcaaaaccgcacacagaacaga
gttgctttgacctcttcagtatggggttcagtgagtaataccagtcactggggctcagac
agcagcagcatctggggtgacactcagaactctaacctaggcttctgggatgatgctgtg
aaggaaactgctccacctccaaccacacgaaagaacaactcgcagaaaaacaagggaaac
gttaacctcagtaacagtaacagtggaaaatccagtaagaaggtagaagaggaggagaaa
ctgttaaagctctttcagggagccaataaaactcaggatggctttatgcagtggtgtgag
cagatgctacacacacttaacactgccaacaaccttgacgtcccgacatttgcgtcgttc
ttgaaggaggtggactctccatacgaggtgcatgattatgtacgggcatatctgggtgac
acgccccaggccaaggactttgccaagcagttcctggagcgccgtgccaaacagaacatc
aaccagcaaaaacctttgcagagtcagcagccgaaaaatcagcaggactcggtgtggggg
gtaaaccaaaccgtttctcagccagttttccagtccaaccactccacaaagcaacagcaa
ccacgctttgagacagtcacctctgggaagaagaaaaagaagcagaaaatggtgcgggca
gatcccagtctattaggcttttcagtcaacgcgtcatctgagcgattaaacatgggcgag
atcgagactgtggaggacttttga
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integrated database retrieval system
