Pangasianodon hypophthalmus (striped catfish): 113533930
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Entry
113533930 CDS
T05759
Symbol
lmna
Name
(RefSeq) lamin
KO
K12641
lamin A/C
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04210
Apoptosis
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
113533930 (lmna)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113533930 (lmna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113533930 (lmna)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
113533930 (lmna)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
HAUS-augmin3
Crescentin
DUF4407
Laminin_II
Baculo_PEP_C
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
113533930
NCBI-ProteinID:
XP_026782213
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MESPAQKRTSRGGASSVVSPTRITRLQEKEDLSNLNDRLAVYIDKVRSLEVENAGLRLRI
TESETEISRELGGMKAAYESELADARKTLDSVAKERARLQLELSKIREDYKELKARNSKK
EADLESALARLKDLEALLNSKDASLTTALGEKRSLESEVRDLKAQLAKLEGSLNDAKKQL
QDEMLRRVDAENRIQTLKEELEFQKNIYAEELRESKRRHESRMVEIDSGRQQEFESKLAE
ALVELRGQHEEQLRIYKEEIEKTYNAKLENARQSADRNSHLVGAAHEELQQTRVRLESMS
AQLSQLQKQLAAREAKVRELEEAMSRERDLMRRRLEEKEKEMADMRHRMQQQLDEYQELL
DIKLALDMEISAYRKLLEGEEERLRLSPSPPPGRVISVTRTSGSGTHTQTRLAQSSSTRT
SSGSAKKRRLNDTDSEASSVTGGTVTRTRISQQASASGRVTVDEVDLEGKYVRLSNKSDQ
DQSLGHWQVKRQVGSGTPIIYKFPPKFALKAGQTVTIWAAGAGGTHNPPSDLVWKSQNSW
GSGDLFQTTLISSSGEEMAMRKVTRTLFQEEDDEEMAAHSTCGDGEYNLRSRTVICGSCG
QPSDRSAGSCVSASSGVSSASRSFTSGGGGLPEGLVSHSHFIMGNDNPRQGGPKPEKCSI
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccggctcagaaacgaaccagccgtggtggggcgtccagcgtggtctcaccc
acgcgtattactcggctgcaggagaaagaggacctgagcaacctgaacgaccgtctagct
gtgtacatcgataaggtgcgctctctggaggtcgagaatgccggcctgcgactgcgtatc
acggagtcggagacggagatcagccgggagctgggcggcatgaaggcagcgtacgagagt
gagctggctgatgctcgcaaaactctcgactcagtggccaaagagagagccaggttgcag
ctagagcttagcaagatccgcgaggactacaaggagctcaaagccaggaacagtaagaaa
gaggcagatctggagtcagctctggccaggctaaaggatctggaagctctcctcaactcc
aaggatgcttctctcaccacagccctaggagagaagaggtctctggagagtgaagtcagg
gatctgaaggctcagttggctaagttggaaggcagtctgaatgatgctaagaagcagctg
caggatgagatgctgaggagggtggatgcagagaaccgcatccagactctgaaggaggag
ctggagttccagaagaacatctatgctgaggagctgcgcgagtcaaagcgtaggcatgag
tcgcgtatggtggaaattgacagtggtagacagcaggagttcgagagcaagctggctgag
gctctggttgaactccgcggccagcatgaagagcagcttcgcatctacaaggaggagatt
gagaagacctacaatgccaagctggagaatgcgcgtcagtctgcagatagaaacagtcac
ctggttggagcagctcatgaggagctgcagcagacgcgtgtgaggctggagagcatgtct
gctcagctgtcccagctccagaaacagctggctgcacgggaggctaaggtgcgtgagctg
gaggaggctatgtcacgcgaaagagatctcatgcgccggcggctggaggagaaggagaag
gaaatggcggacatgcgccaccgcatgcagcagcagctggacgaataccaggagctgctg
gacatcaagctggccctggacatggagatcagtgcttaccggaaactgctggaaggagaa
gaggagaggctgcgtctctctcccagtccccctcctggtcgtgtgatatcagtcactcgt
acatcaggctctggcacacacactcagacccgcttggctcagagcagcagcacccgcact
tcgtctggcagtgctaagaaaaggcgcctcaatgacacagacagcgaggcttccagcgta
acgggtgggacagtgacacgcactcgcatttcccaacaggcctcagccagtggccgggtc
actgtggacgaggtggacctggagggcaaatatgttcgtctcagcaacaaatctgaccag
gaccagtctctgggccactggcaggtgaagagacaggtgggctccggtactcccatcatc
tacaagttcccacctaaattcgccctcaaagcgggacagaccgttacaatctgggctgca
ggagctggtgggacccacaatcctccctctgacctggtgtggaagagtcagaactcctgg
ggaagtggagatctcttccagactactctgattagctccagtggagaggagatggcaatg
cggaaagtgacacgcacactgttccaggaagaagatgatgaggaaatggctgctcacagt
acatgtggcgatggagaatataacctgcgtagccgcacggtgatctgtggctcatgtggt
cagccatcagacaggagtgctggcagctgtgtgtcggccagctctggagtctccagcgcc
tctcgctctttcaccagtggaggaggaggacttcctgagggcctggtctcccactcccat
tttattatgggcaacgacaatcccagacagggaggtcctaaaccggaaaaatgctccatc
atgtaa
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