Pangasianodon hypophthalmus (striped catfish): 113534506
Help
Entry
113534506 CDS
T05759
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113534506
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113534506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
Phage_portal_2
LMBR1
Motif
Other DBs
NCBI-GeneID:
113534506
NCBI-ProteinID:
XP_026783166
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKSLDYSNGIFDCQSPTSPFMGSLRALHLIEDLRGVLE
LMDTEEREGLRCQIPDSTAHSLVEWLQGQLSNGHISVTGDIYQDRLNRLESDKESLVLQV
SVLTDQVEVQGEKIRDLDLCLEEHREKLNSTEEMLQQELICRSALETQKLELMAEISNLK
LKLTAMEKERIDFDERFRDSEGLILEINELRYRISEMESERLQYEKKLKSTKSLMARLSS
LKIKMGQMEYEKQRKEHKIQALEEELAILRRQLDGKDGELRRLQDETGSRSSTPAGLETT
EREDTFKQRLKEKHLEVQRMKKAVESLMAANEEKDRKIEELRQSLTRYKKVQDMVMSVQG
RKDKLKEEESDESHSDSSLSMSTAMSVSMDAEKSVLSCAEEVKSQDEPTTFISTLHVSSL
TSTQQPKLETDVNLEPVQSQSDAVHQEPSQLQEPEINTSLESVEVPKSSSLTKLDGSTSE
KRPLAVGKSPAESRAFDEFNKITTLPPKSTSSSRAVEDDAFGTKKARSSFGRGFFKLRGG
KRTASAPNLAETERDGMDHLDLAGMPQKSSNSDSTHTLSSCLEGKKKSKGIKAFIGKLTR
SQSTTFTLDDNLSENEFKRGGVRATAGPRLGWSRDLHNTNSEVDAPFARWSREQVCDWMQ
EQGLGLYVNLARQWISSGQTLLQASPQNLEKELGIKHPLHRKKLQLALQALGSEEDDNKG
KLDYQWVTRWLDDIGLPQYKTQFDEARVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQ
VLRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGL
MVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQQTKQECMENPDYTLLTAT
AKVKPRKLPFGTFGTLKKKRQEDSEEYVCPMDVEMPKGHSFQKGFRGMELHIYEDDLDRL
EQMEDSEGTVRQIGAFSEGINNLTSMLKDDEFFKEIVTSSPNPSVTDDDSNV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgatatgttggcagctgctttggagcaaatggatggcatcata
gcaggctccaaatcacttgactattccaatgggatctttgactgccagtctccaacctca
ccgttcatgggaagcctgcgggcgctgcacctaatcgaggatctgaggggggttttggag
ctcatggacacagaggagagagagggactgcgctgccagatacccgactcgacagcacac
agtctggtggagtggctacagggacaactatcaaatgggcacatttcagtgactggtgat
atttaccaagacagactaaatcgccttgaaagtgacaaggaatcccttgtgcttcaggtg
agtgtcttgacagaccaagtggaagttcaaggagaaaagataagagacctagacttgtgc
cttgaggaacaccgtgaaaaactgaattccactgaggaaatgctacaacaggagcttatc
tgtaggtcagcacttgagacccagaagctggagctgatggctgagatatccaatttaaag
ctaaagctgactgccatggagaaggagagaatagactttgatgaaagattcagagatagt
gagggtttgatcctagagattaatgagctgaggtatcgcatttctgagatggagagcgaa
cggttgcagtatgagaagaagctgaagtctaccaagtcgctaatggcaagactgtctagc
ctgaaaatcaaaatgggccagatggagtatgaaaaacagaggaaggaacacaaaatccag
gcactcgaggaggagctggctattttaagaaggcagctggatggtaaagatggagaacta
aggaggctacaggatgagacagggtccagatcgtccacacctgcaggcttagaaaccact
gagagagaggatacttttaagcagaggctcaaagagaaacatttggaagtgcaaagaatg
aagaaagcggttgagtcacttatggcagccaatgaagagaaggatcgcaagattgaagag
cttcgacagtcacttacacgttacaagaaggtgcaagacatggtcatgtccgtgcagggg
agaaaagataaactgaaagaagaagaaagtgatgagagccacagtgacagctctctctcc
atgtcaacggcaatgtcggtttccatggatgctgaaaagtccgtcctgtcatgtgctgag
gaagtgaagagtcaagatgagccgacgacatttatcagcacgctgcatgtgtcttcactc
acatccacgcaacaacccaaactagagactgatgtgaacctggagccagtgcagtcacag
agtgatgcagtgcatcaggagccaagccagttgcaggagcccgagataaataccagtctg
gaaagcgtggaggtccccaaatctagcagcctgactaaactggatggcagcactagtgaa
aagaggcctttggcagttggaaagagtccagcagagagtcgtgcttttgatgaattcaac
aagattacaactttaccgccgaagtccactagcagctcccgtgctgttgaagatgacgct
tttggcacaaagaaggcgagatcttcttttggacgaggtttctttaagctcagaggaggc
aagagaacagccagtgctccaaatcttgctgagacagagcgcgacggcatggaccatctg
gatcttgcagggatgccgcagaagtcaagcaacagtgatagcacacacactctctccagc
tgcctagagggcaagaagaagtctaagggaatcaaagcattcataggaaagcttacaaga
agtcagtcaaccacattcaccttggatgacaacctatcagagaacgagtttaagcgggga
ggagtccgagccaccgccggtcccaggctgggatggtcacgtgacctgcacaacactaac
agtgaggtggatgctccatttgcgcgatggtctcgggagcaggtgtgtgactggatgcag
gagcagggactgggtctgtacgtgaacctggccagacagtggatttcctcaggacagact
ctcctgcaggcttctccacagaacttagaaaaggagctgggtatcaagcatcctctccac
aggaagaaactgcaactggctctgcaagcactgggctctgaagaggatgacaacaagggc
aaactcgactaccagtgggtgacaaggtggcttgatgatattggacttcctcagtacaaa
actcagtttgatgaagcaagagtggatgggcgaatgcttcactacatgaccgtggatgac
ctgctgtctctgaaagtgggcagtgtgctgcatcacctcagcattaagcgagcaatccaa
gtgctccgcctcaacaattacgagcccaactgtctgcgccgcagaccctcagatgagaac
aatatcactccggctgaaatctctcagtggaccaatcaccgtgtgatggagtggctgcgt
tctgtagatctggcagaatacgcacccaatctgaggggcagtggagtccacggaggactg
atggttctagagcctcgctttaatgtggagacaatggcgctgcttctgaacattcctccc
aacaagaccttgctccgaaggcacctggctactcattttaacctgctggtgggctcggag
gcccagcagaccaagcaggagtgtatggagaatcctgactacactttactcactgcaact
gctaaggtcaagccaagaaaactgccattcgggacctttgggacgttgaagaagaagaga
caggaggatagcgaggagtatgtgtgtcccatggacgtggagatgccaaaaggacacagt
ttccagaagggcttcagaggcatggagctgcacatttacgaggatgacctggaccgacta
gaacagatggaggactcagagggaactgtgcgacaaattggggctttctcagagggcatc
aacaatttgacgagtatgctgaaagatgacgagttctttaaggagattgtaacatcgtcc
cccaaccccagcgtgactgatgatgactccaatgtttga
DBGET
integrated database retrieval system
