Pangasianodon hypophthalmus (striped catfish): 113534701
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Entry
113534701 CDS
T05759
Symbol
lrriq1
Name
(RefSeq) leucine-rich repeat and IQ domain-containing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_8
IQ
LRR_9
Motif
Other DBs
NCBI-GeneID:
113534701
NCBI-ProteinID:
XP_026783456
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MDADDIENVIEEELDKLSVNLSDMGSDSDTDIEEDFTASVEKLEKDLPDSVLTYFKASSN
RLNTVEQLILEDLDDLETMCNEMFSPSQHADLLSELGSNFEDPLKLKERIMSEIEEQVGP
PCETHDLNGDYDTEYDTHKDSERQLMFEWRRLEERLRKEEEQRLAELEAEREQCMTSARE
EEEKRRRRSEQFEEELTRTEATNQFEYLKAVEGDGEISQSLQLEMVEQQELIKRLEEQIA
EERRVFEEVQREEGRRTVARRTAAATKLQAAFRGTLVRHWSKKELTKRREEERRRQEERK
EMERRRQREERMKMEWEKERRRVEQEVQRHREEAERRRAEYERAKEQERHRLERERKLEE
QRRKKKEEAKRREDERKRKEEEKQKRMEERSVEEEMRKVQEQEEKKIKEEEKAKRFEDEI
KRKEDVESPEGMEERRGEEESRKVQEDEENKSKEKEKAKRIEDEIKRKNEEESVEKIEER
TVEEVRRKVKEDEEKTRKEEEKAKRLEDDRKRKDEEKQKEMEGRRVEEERKRKEVEESKR
IEDERKRKEKEKQKSMEIRRVEEEKWKVQVEEEKERKRVEEAKRAEDERKRKDEEKQKRM
EERRVEENKKRKEEEEEKRTDAEIKRKEEEEKQKGMNEKRVVEEIRLKEKEQLKENETEQ
MQKEQRNKLKEKDNKGEEIVMKRNDDGQNMEKERRRNIIKDNVKGLVDQRENPETDKESE
NTTNWGKDEKCGDNVSQLCLSHSVNMSRSFLARTLSSRNDQDEQLSSHLVSALPTLPADN
SSVTLTPSEEKSATGTGGPQCAPDDSRSACLPDSTEQKRLAWMMSCTPWSKLSMQNQRKG
LGAPPRRRGHRRASGHSLLPFPVDTVLRSGPWSSLKQVTSVTLEDLSGCSLSTLSECTRL
QSLTLRRCRLQALDGLNQCTELQHIDLQENNITYVDCGGLARLEVLLLGRNQLMSIHGLD
DAVNLTVLQLSHNIISRISGLGSLKKLHRLTIDHNQLISTRGLSEAFTLLHLDCSYNHLS
HVEGLENCALLNTLDLRGNNLTELPVLKNHVLLRELYLDDNSICSLHGLESCWLPLLHCL
SVPQNSITQLPLLVDLVSLKTLNVSHNCLSELRNICMSLQGCTRLQELSINDNPVQQENN
WRSSVLAVNPNLIKLNGEQTGASGTLSADSTQLWSFQALCQAHQDQIDSVLQRHSMEISS
APSALHAQLLVGNHATELFQLAEEQRYAHEYGDSGVCETAMQEPVASSHLHELSAWDLAQ
KKSAEAKTQQPAEHKTLSWQAPHGCPGSCISPTQKFRDTQPRDRYSRYAVQASRMDLKTV
AAMVIQCRWREHRQRRRTGYLGPPAKAHSRLNPQREVKSCKTRPERLNKDYAATVIQAVW
RGYLLRKRLARALMLAQLSEGDEAFEEVDMDEFIFDEEAMEKDWITLHSDMSPSSVLPYS
EQLPLPKPLLPLPELHKSASVQPWTPRQAWISGEETPVLEQRQSPDPSTRMRSPASTLGK
YSLSERSEKILEEWGLSSGSTARLMLKRAQRMKARKQQHQKKLLDPAVRLALFRKRNMRP
VAMSIHRSRPEFREEIKVSSVAGRGDVSVQEALRGEPEQMQTQTRRRTYQWLQTQAVLSQ
RSSAPSASDHFLPEIDPEILNGGRVQLVASTGYREAPDSAGKQWIDSAGFSSPQNHQAHT
RTHSAGPAKKEVPSPQRVTLAPSRKERISFRDNPVQLSGGWGGGKKRSNANKLK
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatgacattgaaaatgttatagaagaagagctggacaagctgagtgtgaat
ctgtctgacatgggctctgacagtgacacagacattgaggaagatttcactgcatctgtt
gaaaagctagagaaggaccttcctgactcagtgctcacctactttaaagcttcaagtaac
agattgaatactgttgagcaactcatccttgaagatcttgatgatctcgagaccatgtgt
aacgagatgttcagtccgagtcagcatgctgatcttctgagtgaactaggctctaatttt
gaggatccattaaagctgaaggaaagaataatgtctgaaattgaagagcaagtaggcccc
ccatgtgaaactcacgacttgaatggagattatgatactgaatatgacacacacaaggat
tctgaaagacagctcatgtttgaatggagaaggctggaggagcgactgaggaaagaggag
gagcagagactggccgagctcgaggctgagagggagcagtgtatgacgtcagcgagagaa
gaggaggagaagaggaggcgcagaagtgagcagtttgaggaggagctgacgaggaccgaa
gcaactaatcagtttgaatatttgaaagctgtagaaggagatggtgaaataagccaaagt
cttcaacttgaaatggtcgaacagcaggagctgatcaagagattagaagaacagatagcg
gaggagaggcgagtgtttgaggaagtacagcgggaagaggggaggagaactgtggcacga
cgcactgcagcagccacaaagttacaggcagctttcagagggacactggtgcgtcactgg
agcaaaaaagagctgaccaagaggagagaagaggagaggaggagacaggaggagaggaaa
gaaatggaaaggaggagacagagggaggaaaggatgaagatggagtgggagaaggagaga
aggagggtggagcaggaggtacagcgtcacagagaagaggcggagaggagaagagccgag
tacgagcgagccaaggaacaggagcgccatcgcctggagagagagcgcaagctggaggag
cagagaagaaaaaaaaaggaagaagcaaagaggagagaggatgaaaggaaaagaaaggag
gaggaaaagcagaaaaggatggaagagaggagcgtagaagaggaaatgagaaaagtacag
gagcaggaggagaagaaaattaaagaggaggaaaaagccaaaagattcgaggatgaaata
aaaagaaaagaggatgtggaatcgccagaagggatggaagagaggagaggggaggaggaa
agtagaaaagtacaggaggatgaggaaaacaaaagtaaagaaaaggaaaaggcaaaaaga
attgaggatgaaataaaaagaaaaaatgaggaggaatcggtggaaaagatagaagagagg
acagtggaggaggtaaggagaaaagtaaaggaggatgaggagaagacaagaaaagaagaa
gaaaaagcaaagaggcttgaggatgacaggaaaagaaaggatgaggagaagcagaaagag
atggaagggaggagagtggaagaggagaggaaaaggaaagaagtagaagaatcaaagagg
attgaggatgaaaggaaaagaaaagagaaagagaagcagaaaagtatggaaatcaggaga
gtggaggaggaaaagtggaaagtacaggtggaggaagagaaggaaagaaaaagagtggaa
gaagcaaagagagcggaggatgaaagaaaaagaaaggatgaagagaagcagaaacgaatg
gaagagaggagagtggaggagaacaagaaaagaaaagaagaggaagaagaaaagaggact
gacgctgaaataaaaaggaaagaggaagaggaaaagcaaaaggggatgaatgaaaaaaga
gtggtagaagagattagattaaaggagaaagaacaacttaaagagaatgaaactgagcaa
atgcagaaagagcaaagaaataaacttaaggaaaaggacaacaaaggagaggaaatagta
atgaagagaaatgatgatggacagaatatggagaaagaaagaagaagaaatataattaag
gacaatgtaaaaggacttgttgatcagagagaaaatccagagactgacaaggagagtgag
aatactacaaactggggaaaagatgagaaatgtggtgataatgtatcccagctatgtctt
tctcactcagtcaatatgtccagaagtttcttggccaggactctgtcctctagaaatgat
caagacgagcagctcagctctcacctagtatcagccctgcccactctgcctgctgataac
agcagtgtaacactgactccatctgaagagaaaagtgcaacaggcacgggagggccgcag
tgtgctccggatgactcgagatctgcatgtctgcctgacagcactgagcagaagcgatta
gcctggatgatgagctgcactccctggtccaagctctccatgcagaaccagaggaagggg
ctcggtgctccacccaggaggaggggacacaggagagcttcaggacacagcctgctacct
ttccctgtggacactgttctcaggtccggaccctggagctctcttaaacaggtgacttca
gtaactctggaggatttgtctggctgcagtctctccacactgtctgagtgtaccagactg
cagagtctgacgctcaggcgatgtagacttcaggccctggatggacttaaccagtgtact
gaacttcagcatattgacttacaggaaaacaatatcacatatgttgactgtgggggtctg
gccagacttgaggtcctgctgttgggaaggaaccagcttatgagcatccacggtctggac
gatgctgttaacctgactgtgcttcagctttctcataacatcatctcccgcatcagtggt
ttgggatctctgaaaaagcttcaccgactgacaattgatcataaccagttgatcagcacg
agaggactcagtgaagctttcacgcttttgcatctggattgctcgtataaccacctcagc
catgtggaaggcctggagaactgtgcactgctcaacacactggacctgagaggaaacaac
ctgacagagttgcctgtgcttaagaaccatgtcctgttgagggagctatatctggatgat
aacagcatctgctctctgcatggcctggaaagctgctggctgcctctgctgcactgcctg
tctgtgcctcagaacagtatcacccagctacctctgctagtggacttggtttcactgaag
acacttaatgttagtcacaattgtctctcagagctgaggaacatttgtatgagtcttcag
ggatgcactcgtcttcaggagcttagcataaatgacaatcctgtacagcaggagaataac
tggaggtcttctgttctggcagtaaatccaaacttgataaagctgaatggagagcaaacc
ggcgcctcaggaacactctcagcagactcaacacagctgtggagcttccaggccctctgc
caggcacaccaagatcagattgactcagtcctacagagacacagtatggagatcagctca
gctccatctgcactgcatgctcagctcctggttggtaaccacgctactgagctgtttcag
ttggctgaagagcaacgctacgctcatgagtatggagacagcggtgtctgtgagacagcc
atgcaagaacctgtggcctccagccacctgcatgaattatctgcctgggatttagcacag
aagaaaagcgctgaggccaaaacccagcaaccagcagagcacaaaactctgagctggcaa
gcaccacatggttgtccaggtagctgcataagtcctactcagaaattcagggacacacaa
ccacgtgacagatacagcagatatgccgtccaggcttccaggatggacctcaaaacagtg
gcagctatggtgatccagtgccgctggcgtgaacacagacagaggagacgcacaggctat
ttagggccacctgcaaaagctcattcacgattgaatcctcaaagagaagtgaaatcctgc
aaaacccggcctgagcgtcttaataaagactatgctgctactgtcattcaggcagtatgg
aggggctacttgctacggaagaggctggctcgtgctctcatgctcgcccagctatcagag
ggagatgaggcctttgaggaggtggacatggatgaattcatttttgatgaggaagccatg
gagaaggactggattactctgcattctgacatgtcgccgtcctcagtgctgccgtattca
gaacagctgccgctgccaaagcctctgcttcctctgcctgagcttcataagagtgcatca
gtgcagccatggacacccagacaggcctggattagcggtgaggaaacaccagtgttagag
cagcgtcagtcacctgatccaagcactagaatgcgatctccagcatcaacactaggaaaa
tattctttatcagaaagatctgagaaaattctggaagaatggggtcttagcagtggctcc
actgctcgtcttatgctaaaaagggctcagaggatgaaggccaggaagcagcagcatcag
aaaaaattactggacccagcggtacgtttggctctgttcaggaaacgcaacatgcggcct
gtggcgatgtcaatccatagatccagacctgaattcagagaggaaattaaagtgtcaagt
gtagctggcagaggagacgtgagtgttcaggaggcactgagaggagagccagagcagatg
cagacgcagacacgccgcagaacctaccagtggctccaaacacaagccgtgctgagccag
agaagctctgccccctcggcgagtgatcatttcctcccggagattgaccctgaaattctg
aatggtggaagggttcagcttgtggcttctacggggtacagagaagctccagattcagcc
gggaagcagtggattgatagcgctggtttctcttcacctcagaaccaccaggctcacact
cggacacactcggctggacctgcaaaaaaagaagtgccgtctcctcaaagagtcaccttg
gctccatctcgaaaggagagaatctcgttccgagacaatccagtgcagctgagtggaggc
tggggaggaggcaagaagaggtctaacgcaaacaagttaaaataa
DBGET
integrated database retrieval system
