Pangasianodon hypophthalmus (striped catfish): 113534869
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Entry
113534869 CDS
T05759
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113534869
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113534869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
U-box
zf-RING_2
zf-Nse
zf-RING_5
zf-RING_10
DUF4618
zf-RING_6
DUF4200
PTPA
DUF6794
Prok-RING_4
LPP
Motif
Other DBs
NCBI-GeneID:
113534869
NCBI-ProteinID:
XP_026783639
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MSSKFSEEDLSCPVCCEIFKDPVLLHCSHSVCKVCLQQFWETKGSRECPVCRRKSSLENP
PINLALKNLCETFLQERSQRSSSASETVCSLHSEKLKLFCLDDQQPVCVVCRDSRKHTNH
KFCPIDERATDCKEELKTALKPLQEKLKIFKDCKLNWSQTAEHIKIQAQHTEWQIKEAFE
KLHQFLRDEEAARIAALREEEEQKSQMMKEKIEKLSRDISSLSDTIGAIEEEMRAEDISF
LQNYKDTVKRAQCTLQHPEELSGALIHVAKHLSNLKFRVWEKMQDAVQYTPVTLDPNTVH
PELIVSDDLTSVRLSDEKQKLPDNPERFDKYLRILGSQGFNSGTHCWDVEVGDCTHWIVG
VMTESAQRKGNVFSRSGIWYVWYFCGKYGARSTPQTFTLLSVAQKLQRIRVQLDWDRGKL
SFSDPLTNTHIHTFTHTFTDKLLPFLSVIGKESPLKILPLQCSVRVNQIS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaagttttcagaggaggatttgtcctgtcctgtgtgctgtgaaatcttcaag
gatcctgttctcttgcactgcagtcacagtgtgtgtaaagtgtgtttgcagcagttctgg
gagaccaaaggatccagagaatgtcctgtttgtaggaggaagtcgtctctagaaaaccct
cccataaacctggccttaaagaacctgtgtgagactttcttacaggagagaagtcagaga
tcttcatcagcgtctgaaacagtctgcagtctgcacagtgaaaaactcaaactcttctgt
ctggatgatcaacagccggtgtgtgtggtgtgtcgggattcaagaaaacacaccaaccac
aaattctgccccattgacgaaagagcaacagactgtaaggaggagctgaaaactgcactg
aagcccctacaggagaaactgaagatctttaaagactgtaaactgaactggagtcagact
gcagaacatataaagattcaggcccaacacacagagtggcagattaaagaggcgtttgag
aagcttcaccagtttctacgagatgaagaggcagccaggatcgctgcactgagagaggaa
gaggagcagaagagtcagatgatgaaggagaagattgagaagctgagcagagacatatca
tctctttcagacacaatcggagccatagaagaggagatgagagctgaagacatctcgttc
ttacaaaactacaaggacacagtgaaaagagctcagtgcacactgcagcatccagaggag
ctttcaggagcactgatccatgtggcaaaacatctgtccaacctgaagttcagagtctgg
gagaagatgcaggatgctgtccaatacacacctgtaactctggaccccaacactgttcat
cctgaactcattgtatctgatgatttgaccagtgtgagactcagtgatgagaaacagaaa
cttcctgataatccagagagatttgataaatatctgcgcatcttgggctctcagggcttt
aactcagggacacactgctgggatgttgaagttggagactgtacacactggattgtgggt
gtgatgacagaatctgctcagaggaagggaaatgtattctcaagaagtggaatctggtat
gtgtggtatttttgtggtaaatatggagcacgttctacaccacagactttcactctcctc
tcagtagcacagaaactccagaggatcagagtgcagctggactgggacagaggaaagctg
tcattctccgaccctctcactaacacacacatacacactttcacacacacatttactgac
aaattactgccattcctaagtgttattggtaaagaatctcctctaaagatcctcccactt
cagtgctctgtaagagtgaatcagatcagttag
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