Pangasianodon hypophthalmus (striped catfish): 113535480
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Entry
113535480 CDS
T05759
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Glutaredoxin2_C
DUF6591
Motif
Other DBs
NCBI-GeneID:
113535480
NCBI-ProteinID:
XP_026784590
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MAEASILHHISVDQFSCPLCLDLLKDPVTIPCGHSYCKVCINDCWDQEDEKGIYSCPQCR
DTFTLRPVIGRNNMLAEVVEKLKKIEVQAASPAHCYAGPGDVECDFCTGRKLKAIKSCLM
CLTSFCETHLKPHLELPALKKHTLIEASSKLQEKICSQHDKLMEIYCRTDQRCICSLCML
DNHKCHDAVSLSAERTEKQSELKKEQLKCQQRIQEKQKKVQELKQAVNMIKSRAQTAVED
SEIIFTEMISFMEKKRSEVTELIRAQEKAEVRRAERLLEQLEQEITDLNRRVTEMEQLSH
THDHIHFFQSFRSLCVSSGREDSPSITVHQHLSFDGVRNSLSDLKKRFEEFCKKEFNKIP
PHELSYTGFLILFSHTPREAGRGGGTAAAVQKISPSEPTSREDFLKYFCYLTLDPNTANH
YLHLSEKNRVVTCSLKKQLYSDLPEKFDSCSQVMCKESLCGRCYWEVEWRGVVSISVSYK
EIRRKGAGKECEFGRNSQSWSLCFSSFSSSLSFYHDDMKTELGVPSSSRIGVYVDQNAGS
LSFYSVSDTMRLVHRVHTTFTQPLYAGFGVSGTVRLCDPK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccagtattttacatcatatttcagtagatcagttcagttgtcccttgtgt
ctggatctcctgaaggatccggtgactatcccctgtggtcacagttactgtaaggtgtgt
attaatgactgctgggatcaggaggatgagaagggcatctacagctgtcctcagtgcaga
gacactttcactctgaggcctgttataggcagaaacaacatgctggctgaagtggtggag
aaattgaagaagattgaagtccaagctgcttctcctgctcactgttacgctggacctgga
gatgtggagtgtgatttctgcactgggagaaaactcaaagccatcaagtcctgtctgatg
tgtctgacttccttttgtgaaactcatcttaaaccccatcttgaacttcctgctttgaaa
aagcacaccttaatcgaagcctcctcaaaactccaggagaagatctgctctcaacatgac
aaacttatggagatctactgtcgtactgaccaaaggtgcatttgttctttgtgcatgttg
gataatcacaaatgccacgatgctgtatcactttcagcagagagaactgagaaacagagt
gagctaaagaaggagcagctgaaatgccagcagagaatccaggagaagcagaagaaggtg
caggagctgaaacaggctgtgaacatgattaagtcccgtgctcagacagcagtggaggac
agtgagattatctttactgagatgatcagcttcatggagaaaaagcgctcagaggtgacg
gagctgatcagagctcaggagaaggctgaagtgcgtcgagctgaacgactcctggagcaa
ctggagcaggagatcactgatcttaataggagagtcactgagatggagcagctttcacac
acacacgatcacatccacttcttccagagtttccggtctctctgtgtctcttctggacgt
gaggattcacccagcatcactgtccatcaacatctctcattcgatggagtgaggaattct
ctctcagatctgaaaaagcgattcgaggaattctgcaagaaggaattcaacaaaatccct
ccacatgaactcagctacaccggcttccttatcctcttttcgcacactccacgagaagct
ggcaggggtggtggtacagctgcagcagttcagaagatttcaccctcagagccaacgagc
agagaagattttctgaaatatttctgttatctgactctggatcccaacacagcaaatcat
taccttcatctgtctgagaagaacagagtggtgacatgcagtctcaaaaagcagctgtac
tctgatcttccagagaagttcgactcctgtagtcaggtgatgtgtaaggagagtttatgt
ggacgctgttactgggaagtggagtggagaggtgttgtgtccatctcagtctcctataaa
gagatcaggaggaaaggagcgggtaaagagtgtgagtttggacgaaacagtcagtcttgg
agtctgtgcttttcttctttttcttcctctctctctttctatcacgacgacatgaaaact
gagcttggagttccatcatcctccagaataggagtgtatgtggatcagaacgcaggaagt
ctgtccttctacagcgtctctgacacaatgaggcttgtccacagagtccacaccacattc
actcagcctctatacgctgggtttggggtttctggaactgtgaggttgtgtgacccaaaa
taa
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