Pangasianodon hypophthalmus (striped catfish): 113535624
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Entry
113535624 CDS
T05759
Symbol
sycp1
Name
(RefSeq) synaptonemal complex protein 1 isoform X1
KO
K19533
synaptonemal complex protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113535624 (sycp1)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
113535624 (sycp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SCP-1
CTD
Motif
Other DBs
NCBI-GeneID:
113535624
NCBI-ProteinID:
XP_026784873
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MERAFNFKLLVPPRTRLGQVSAVKPQDPGLFEDDSSFTVPVQSFNKCFEKETISNTKMVL
PTESPKSEFTKRIAVMPIEKEEPPLRSSQLYSKLFEEAEKIKAWKLKMDYDISQKDRKLQ
ENRRTVETQRKAIQELQFENESLSMKLEKQLNENEEMRNKSNATRNLCNILKDTFERSTE
KMSLFEAEREETHGLFLQNHENIQRMAAAFETLRLQAEADQLEMLKAKEGLKQFEDLKVR
FENEYRMKEEKVSLLEEKLREKESQLTEILLKLQETQKNFSQLQESANQHLELLHNCKQE
QDELQEKLEREEQLRQESEKNQKSLVNTLEQTKEMYVKNLLEKDIELKDINNIKEQLTHQ
IEEMQVTADSLQSSLKLEKKRVQELESELSSISEELCSKKTELGILREVKVECDSQIQAL
KFEMETKENTLKSFEEKIKADEEQILQLTSEHEEKQAEINKLKEKLEIAAVENKKMVATL
EEAVNEQTLLKEHYLLKEVKLQEIEGQLSEALKKESESSNNIKRLQMDISQYKDRYDDLL
ERFNQLLLQKNTVQEEDSDPKAKEIKETEEKMKIEVGKLEVEKQQLQKQLEVLNAKIEEQ
HQENENIQKLLKESNKSSQNRLMKKERQVKALELKLTNLKTKLEAKAKTQDENLKEIAKL
KEESQSLKHHHEEEYKRICAELENKSASEAEFTLEVQKWKQTSVEATKSKEDTAIKFQQK
IADMVALMERHKHEYDKMVEEKDAELNEKRIREAEVNANKTSVELELSHLQVENVQLKQQ
LDEIKMEKENLQQQVEELNKMQTSQKDIYKKKEECLEQEMITLKKQIKSLEKDKTQKLSE
TASKNDKGSETPDVAPIKKSTPAFSKKKGIETPSRKDPATPFRLDDSLKTPSWTLGTNTG
TTSRIRSFRIRTPPSTEKSALWKKNTLELDPKSDSSEQNDVLSFSTIINKQRMDSGTECL
GLFKKVQSSVVYKSPGAALKLAAMKRMRDAGWTTITSSDKKKKKVTEKIFA
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagcatttaactttaaacttttagttcctccaagaaccaggctaggtcaggtg
tcagccgtaaagcctcaagatcctgggctgtttgaagatgacagtagctttacagtacca
gttcagagttttaataaatgttttgaaaaagagaccatttcaaataccaagatggtgttg
cctacagagtccccaaaatcagagttcacaaagaggattgctgtgatgccaatagagaaa
gaagagccaccgttaagatccagtcagttgtattccaaactgtttgaagaggctgaaaaa
ataaaagcttggaaattgaaaatggactatgatatctcacaaaaagatagaaagcttcag
gagaatagaaggacagttgagacacagcgcaaagccattcaagaacttcagtttgaaaat
gagagtctgagcatgaaattagagaagcaactaaatgaaaacgaagaaatgaggaataaa
agtaatgcaacaagaaatttgtgcaacattctgaaggacacttttgaaagatctactgag
aaaatgagcctgtttgaggcagaaagagaagaaacccatggtctcttcttgcagaaccac
gaaaacattcagaggatggctgctgcatttgaaactctccggctgcaagcagaggctgac
cagctagaaatgttaaaagctaaggaaggccttaaacagtttgaggaccttaaagtgaga
tttgagaatgagtatcgcatgaaggaagagaaggtttccctgcttgaagaaaaactaaga
gaaaaggaaagtcagcttacagaaattttactcaaactccaagagactcagaaaaacttc
agtcaactccaggaatctgcaaaccagcatcttgaattacttcacaactgtaaacaagaa
caggatgaactgcaggaaaaactggaaagagaagaacaactcaggcaggagagtgagaaa
aaccagaaatcattagttaacacacttgaacaaaccaaagagatgtatgtaaagaacctt
ctggagaaagatatcgagcttaaagatataaataatatcaaagagcaactgacacaccaa
attgaagagatgcaagtgacagcagattccttacagtcctctttaaaattggagaaaaag
cgggttcaagaacttgaatcagagcttagctcaatatctgaggaactctgcagcaaaaaa
acagaactaggaatattaagagaagtgaaagtggagtgtgacagccaaatacaagctctg
aaatttgaaatggagacaaaggaaaataccctaaagtcttttgaggaaaagataaaagca
gatgaagaacagattcttcagctgacttcagaacatgaggaaaaacaagcagaaataaac
aaattgaaggaaaaattggagattgccgcagtggaaaacaaaaaaatggtggctaccctg
gaagaggctgtaaatgagcaaacgctattgaaggagcattatcttctgaaagaggtcaaa
ctgcaagagattgaggggcagttatcagaagcactgaagaaagagagcgaatcatctaat
aatattaaaagattgcaaatggatatcagtcaatacaaggatagatatgatgatctactg
gagagatttaatcagcttcttcttcaaaagaacactgtacaagaagaggacagtgatcca
aaggccaaggaaattaaagaaactgaggaaaaaatgaaaattgaagtagggaaacttgag
gtggaaaaacagcaactacaaaagcagttggaggtactaaatgcaaaaattgaggagcaa
catcaagagaatgagaatattcagaaactgttaaaggaatctaataaaagctcacagaat
cgactgatgaagaaggaaagacaagtcaaagcactggaactaaagttaacaaatctaaaa
acaaaactggaggccaaagccaagactcaggatgaaaatctgaaagaaatagccaaatta
aaagaagagtcccaaagcctgaaacaccaccacgaggaagagtataagagaatatgtgct
gagctggaaaacaaatcagcctctgaggctgagtttacactggaggtgcagaaatggaag
caaacatcagtggaagcaacaaagagcaaggaagacactgcaatcaaattccagcagaag
atagctgacatggttgctctgatggaaaggcataagcatgagtatgacaaaatggtggaa
gagaaggatgcagaactgaatgagaaaagaatccgagaagctgaagttaatgctaataaa
acttctgtggaactggagctatcccacctgcaggttgaaaatgtacaattaaaacagcaa
cttgatgaaatcaaaatggaaaaggaaaacctgcagcagcaagtggaagaacttaacaag
atgcagacatctcagaaggacatttacaaaaagaaagaggagtgtctagagcaagaaatg
attaccttaaagaagcaaattaaatctcttgaaaaagacaagactcaaaagttgtctgag
actgcttccaaaaatgacaaaggctctgaaactccagatgttgctcccatcaagaaatca
acccctgcattttcaaagaagaaaggaatagaaactccgtcaagaaaagatccagcaaca
ccttttagattagatgacagtcttaaaacaccatcttggactttgggaacaaacacagga
acaacatctcgaataaggtctttcagaatacgcacaccaccttcaacagagaaatcagca
ctatggaagaaaaacaccctggagctggatcctaaatctgacagctcagagcaaaatgat
gtactgagtttctctaccatcattaacaagcaaagaatggactctggaacagagtgcctg
ggcttattcaagaaggtacaaagttctgttgtttataagtctccaggggcagcattaaaa
ctggcagccatgaagaggatgcgggatgcaggttggactaccattaccagttcagacaag
aaaaagaaaaaagtcactgaaaaaatatttgcttaa
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