Pangasianodon hypophthalmus (striped catfish): 113536094
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Entry
113536094 CDS
T05759
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecules
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113536094 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113536094 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phyp00535
]
113536094 (sdc3)
Proteoglycans [BR:
phyp00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
113536094 (sdc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
TGF_beta_GS
eIF-3_zeta
Motif
Other DBs
NCBI-GeneID:
113536094
NCBI-ProteinID:
XP_026785678
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MKLPGWMAVALLLAHSVSTQRRSSQPVDQESSGDDLYDDEDYFSGSGSGYPVMEVDATEL
GTSFTTKEPLPLSTTQATGPAPSAPPAAEPSSPPVPEIERESGMDSERELELEMEKKREQ
QIEHEQEMERVRERERERERERERERERERERERERERERERERERERERERERDRERER
EREKERQKARSTIAPRVPFVPIMTTDSLMIVDETPIPTEDMEDLGTTEEEDGMFIPTETY
PFESLSTEDPITDDITTTEAAPTTIASTTAIPITTPATPGTPPPRSRKPQPMPSITPPRP
RKPQATPSPATPTESTRPMPASTVQVKTPSADINNEVAVAGPSGDSEIREDEGRRGNEVG
HGKGASDVGAEPDLTGNTIDTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVML
LVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaccgggctggatggctgtggcgctgctgctcgcgcactctgtgtcgacacag
cgtcgctcatcacagccagtggatcaggaaagctctggagatgacctctatgatgatgag
gactatttctctggttcaggctcgggctacccagtgatggaggtagacgccactgaactg
ggtacgtctttcaccacaaaagagcccctcccactttcaaccacacaggccactggaccc
gccccctcggccccacccgctgcagagcccagcagccccccggtgccagaaatagagagg
gagagtggtatggatagtgagagggaactggagctggagatggagaaaaagagagagcag
cagattgagcacgaacaggaaatggagagagtgcgggaaagagagagagagcgagagagg
gaaagagagagagagagggaaagggagcgagagagggagagagagcgtgagagggagaga
gaaagggaaagagaaagggagagagaaagagagagggagagagaccgtgaacgtgaaaga
gaacgtgaaaaagagagacagaaggcaagaagtacaattgcacccagagtcccctttgtt
ccaataatgactacggactctcttatgattgtggatgagacccccattccaactgaagat
atggaggaccttggcaccacagaagaagaggatggtatgttcattcccacggaaacctac
cccttcgaatcactcagcacagaggaccccatcacagatgacatcacaaccactgaagca
gctcccaccactattgcttccactacagcaatcccaatcacaactcccgccacacccggc
actccccctccgcgatcacgaaaacctcaaccgatgcccagtatcactcctccacgacca
cggaaaccccaagccacgcccagcccagccacgcccactgaaagtacacgcccaatgcca
gcctctacagtgcaggtaaaaactccaagcgcagacataaataatgaagttgcagttgct
ggtcccagtggggactctgagatccgagaggacgaagggcgacgaggaaatgaagtgggg
catggcaaaggtgcatcggatgtgggggcggagccggatttgactggcaacacaatagat
acaggaagttcagctgctcagcttcctcagaaaaacatcttggaaagaaaagaagttttg
atagcggtgattgttggaggtgtagttggtgcactcttcgctgcattcctggtcatgtta
cttgtatatcggatgaaaaagaaggatgaaggcagctacactctggaagaacccaaacaa
gccacagtcacttatcagaaaccagacaagcaggaggaattctatgcctaa
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