Pangasianodon hypophthalmus (striped catfish): 113536404
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Entry
113536404 CDS
T05759
Name
(RefSeq) LOW QUALITY PROTEIN: signal peptide, CUB and EGF-like domain-containing protein 2
KO
K24706
signal peptide, CUB and EGF-like domain-containing protein 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113536404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
EGF_3
Ephrin_rec_like
CUB
EGF
hEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
113536404
NCBI-ProteinID:
XP_026786091
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MRSVCLALRFCWLLLLLLLCNCERKSAALPRDTDVDQCSDGSDACHIDAICQNTPTSYKC
TCKSGFKGDGTHCEDIDECDSEFNGGCVHECNNIPGNYRCTCYDGFNLAHDGHNCLDVDE
CLFNNGGCQHVCVNTMGSYECRCKHGFFLSDNQHTCIHRSVEGLSCMNKEHGCAHICRET
PKGGVSCECRPGFELAKNQRGCILTCNHGNGGCQHVCEDTEHGPVCRCHARYTLQTDGRS
CVERDDVTASSSDHNATSLAEVDKRVKRRLLMETCAVNNGGCDSMCKDTSTGVRCSCPVG
FTLQPDGKSCKDIDECEFHNGGCDHFCRNTIGSFECSCRKGFKLLTDERSCQDIDECFFE
RTCDQTCVNSPGSFECVCNKGYTLYGLAHCGDINECSVNNGGCGHVCENTMGGFQCHCRA
GYRLHWNKKDCIEADGSPVLMVPVRPTLNCSKHGGAEHCFLTCQSQVNISSGAEDSYTVT
CGLPLPGSSGGGQRGDGGPHCSGLDSFCTHRIKTTATFKWGQGKCSLKRSPEKLTESFSM
ALSDKKALATENVQFSFVRLHCNSSSPRQRSRHGRKAVEDESSSITALFELDVNPEEVTA
EGCDLACVKRRSEKRLKKTIRTLRKSINREQFHLHFGSSEYELAKKAARPADGPEPCGPG
QVLRDRKCVNCGVGTYHDSEQGRCVPCPAGTYQDEEGQLLCEMCPGPKGRATPRTTGARS
VAECGGETSHRNLSLIHIXFIQINHNLLQFIQNLITMKHNLLIXNNISTQRQFCIVFLXC
XTVKLCVCVCVCVLRTVQCSPGHYYNTSTHRCIRCPLGTYQVEFGQNFCVSCPGNTTTDF
DGSTSVTQCKNRRCGGELGEYTGFIESPNYPGDYPANVECTWIINPPPKRRILIVVPEIF
LPMEDECGDYLVMRKSPLPNSVTTYETCQTYERPIAFTSRSKKLWIQFRSNEGNSGKGFQ
VPYVTYDEDYQELIEDIVRDGRLYASENHQEILKDKKLMKCLFDVLAHPQNFFNYTAQES
REMFPKSFIRFLRSKVLRFLRP
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccgtctgtctcgcgctgcgcttctgctggctgctgctgctgctgctgctgtgc
aactgcgagaggaaaagcgctgcgctcccccgggacaccgatgtggatcagtgctctgac
ggaagcgatgcctgtcacattgatgccatttgtcaaaacactccgacgtcctacaagtgc
acgtgcaaatccggctttaaaggtgacgggacgcattgtgaagatatcgatgaatgtgat
tctgaattcaacggtggctgcgtgcacgagtgtaacaacatcccgggaaattaccgctgc
acgtgttacgatggatttaatttggctcacgatggacacaactgcctcgacgtggacgag
tgtcttttcaacaacggcggctgtcagcatgtgtgtgtcaacaccatggggagttacgag
tgccgctgcaagcacggattcttcctcagtgacaatcagcacacatgcatccatcgctca
gtggaaggtctgagctgcatgaacaaagagcacggctgcgcccacatctgcagagagacg
cccaaaggcggagtttcctgcgagtgccggccggggttcgagctcgctaagaaccagcgc
ggctgcatcctgacctgtaaccacggcaacggggggtgtcaacacgtctgcgaggacacg
gagcacgggccggtgtgcaggtgtcacgccagatacacgcttcagaccgacgggcgctca
tgtgtagaaagagatgacgtgaccgccagcagctctgaccacaacgccacgtctctcgcc
gaggtggacaaacgcgtcaagcggcgactcctgatggagacctgtgctgtaaataatggc
ggatgtgacagtatgtgtaaggacacatccaccggcgtccgctgcagctgtcctgtgggt
ttcactctccaaccggacggcaaaagctgcaaagacatagatgagtgtgagttccacaac
ggaggctgtgaccacttctgtaggaacaccatcggcagcttcgagtgtagctgtcgcaaa
ggcttcaaactgctgacggatgagcgctcctgccaggatattgacgagtgcttctttgag
aggacgtgtgaccagacttgtgtgaactccccgggaagcttcgagtgtgtgtgtaataag
ggatacacactctacgggcttgcacactgtggagacattaatgagtgcagcgtgaataac
ggcggctgtggacacgtctgtgaaaacaccatgggaggatttcagtgtcactgcagagcg
ggatacagactgcactggaacaagaaggactgcatcgaagctgatggttctccggttctg
atggttcctgtgaggccgacgctgaactgcagtaaacacggaggagctgaacactgcttc
ctcacctgtcagtctcaggtgaacatcagcagcggcgctgaagattcctacaccgtgacc
tgtggcctgccgctgccgggctcgtctggaggaggacagcggggcgacggtgggcctcac
tgctcaggtctcgactctttctgcactcacaggatcaaaaccacagccacgtttaaatgg
ggtcaggggaaatgcagtctgaaacgaagtccagaaaaactcaccgagagcttcagcatg
gcgctgtcagataagaaggccttggctactgagaacgtgcagttcagcttcgtgaggctt
cactgtaactcctcgagcccccggcagcgaagtcgtcacggccgtaaagcggtggaggac
gagagctcgtccatcacggccctgtttgagctcgatgtcaacccagaggaggtaacagca
gagggttgtgatctggcgtgtgtgaagcggcgctcagagaagcgcctgaagaagaccatc
cgaactctccgcaagtccataaacagagagcagttccacctgcacttcggcagctcggag
tatgaactcgccaagaaggcggcgcggcccgcagacggccctgaaccctgcggccccgga
caagtgctgcgggacaggaagtgtgtgaactgcggcgtcgggacgtaccacgacagtgag
caggggaggtgtgtcccctgtcctgctggaacataccaagacgaggaaggacagttactg
tgtgagatgtgtccagggccgaagggcagagcgaccccgagaaccaccggagcccggagc
gtcgctgagtgtggaggtgagacgtcgcatcgaaacctgtctctcattcacatctaattt
attcaaatcaatcataatttattacaatttattcaaaatcttattacgatgaaacataat
ttactaatttaaaataatatttccactcagagacaattctgcattgtatttttatgatgt
taaacagtaaaactgtgtgtgtgtgtgtgtgtgtgtgttctgcgtacagtgcagtgttct
cctggacattactacaacaccagcactcaccgctgcatccgctgtccactcggaacctac
caggtggaattcggacagaacttctgtgtgtcctgtccgggaaacaccaccacggacttc
gacggatccaccagcgtcactcagtgcaaaaacaggcgctgtggaggagaactgggtgaa
tacaccggattcatcgagtcgcccaactaccctggcgattatccggctaacgtggagtgc
acgtggatcatcaatcctccacccaagcgcaggatcctcatcgtcgtcccggagattttc
ctccccatggaggacgagtgcggagattacttagtcatgcgcaagagccctctaccaaac
tcggtgacgacgtacgagacgtgtcagacgtacgagcggccgatcgccttcacctcgcgc
tcgaagaagctgtggatccagttcaggtctaacgaggggaacagcgggaaaggcttccag
gttccctacgtgacgtacgacgaggactaccaggagctaatcgaggacatcgtcagggac
gggagattatacgcctcggaaaatcaccaggaaattttaaaggacaagaagctcatgaag
tgtctgtttgacgttctcgctcatccgcaaaacttcttcaactacactgctcaggagtcg
agagaaatgttccccaaatccttcatccggtttctgcgctcgaaagttctgcggttttta
cgtccttag
DBGET
integrated database retrieval system
