Pangasianodon hypophthalmus (striped catfish): 113539618
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Entry
113539618 CDS
T05759
Name
(RefSeq) protein bicaudal D homolog 2-like isoform X1
KO
K18739
protein bicaudal D
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113539618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113539618
04131 Membrane trafficking [BR:
phyp04131
]
113539618
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
113539618
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113539618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BicD
DUF1759
DUF2920
Motif
Other DBs
NCBI-GeneID:
113539618
NCBI-ProteinID:
XP_026791323
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MSGMEQEGFPGTELIPEAGVEGLRAELERVSRELSETSRDKIRAAEYGLAVLEEKQQLKL
RYDELETEYEALRHELDQLKEAYGQAHSAQRKVAEDGESREESLILESASKEAYYEQRVQ
ELQAELRQAKNVLTSTQSENERLSVLTLEMRENAELLELQRTRLRDDIREYKVRESRLLQ
DYSELEEENISLQKQVSTLKEGQVEFEGLKHEIRRLEEEAQYLNSQLEEAVRLREIGERQ
LTEALETVKSEREQKAALRKELTHHMTLGDSLLSGSLDGLRLSESNEPNNDEAMRAFENG
LAKMVDDNDEDNVSSMPKKSLVDDLLSELNICEIQKLKQQLHQVEREKVALLSSLQESQK
QLAQTRGALARLSDDFGATRRVQVAKDKEKEKDSGEDGDVDYYELDIHGPEILRCKYEAS
VAEAGELREELKLLKAELEEVRAEHEEVRSRLEGQVRDLSSQVCSLESDGRAERAQMARL
QRELDEVNTAAGETRRTLGVAQDELASFSEELANLYHHVCVCNNETPSRVTLDFYREGKD
SNEDKDRKDGKEEKPDNTSSTETPASPGSASVRDSRKEPMDVCVLAAMIREQMRHLQQAV
ERGTQLARQRLAPLELAAVPDKEQAACMEEILKLRSLLSTKREQIATLRAVLKANKQTAE
VALANLKSKYENEKTIVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDDMQ
RQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEDLEFHNEQERRGSAAAASARAKRPFSKS
KNLHVSPTPSCRGRPLPHGIVGSPVVFCT
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggatggagcaggagggttttcccgggacagagctgatcccggaggccggggtg
gaggggctccgggccgagctcgagcgcgtgtcccgggagctgagcgagacgagccgggat
aagatccgcgctgcggagtacgggctggcggtgctggaggagaaacagcagctcaaactg
cgctatgatgagctggagactgaatatgaagccctgagacatgaactggatcaactcaaa
gaggcgtacggtcaggcccactctgcccagaggaaggttgcggaggacggcgagagtcgt
gaggagtccctcatcctggagtcggcatctaaggaggcgtattatgagcagagggtgcag
gagctgcaggctgagctgaggcaggccaaaaatgtgctcaccagcacacagagtgagaac
gagcgactgagtgtcctcacactcgagatgagggagaatgctgagctgttggagctgcag
cgcactcgtctgcgtgatgacatcagagagtataaagtcagagagtctcggctgctgcag
gactacagcgagctggaggaggagaacatcagcctgcagaagcaagtgtccacgctcaaa
gagggccaggtggagtttgagggtctaaagcatgagatcaggaggctggaggaggaggct
cagtacctcaacagccagctggaggaagccgtgcggctgcgtgagatcggcgagcgtcag
ctgaccgaggctctggagacagtgaagagcgaacgggagcagaaagcggcgctgcgcaaa
gagctcacgcatcacatgaccctgggagactctctcctcagcggctcactggacggactc
agacttagcgaatcgaacgagcccaacaatgacgaggccatgcgcgcctttgagaacggg
ctcgcaaagatggttgacgacaatgacgaagataacgtttcgtccatgccgaagaagagc
ctggtggacgatctgctgagcgaactgaacatctgcgagatccagaagctgaaacagcag
ctgcaccaggtggagcgagagaaggtggcactcctctcctccctccaggagtctcagaag
caattagcacagacacgtggagcgctagcacgtctgagcgatgattttggagccacgcga
cgtgtccaggttgcaaaggacaaagagaaagagaaggacagtggcgaggacggagacgtg
gactattacgagctggacattcacggccctgagatcctgcgctgcaaatatgaggcttca
gtggctgaggctggagagctgagggaggagcttaagttgttaaaggcggagcttgaggag
gttagggcagagcatgaggaggtgcggtcacggctggagggccaggtgcgcgatctctcg
tctcaggtgtgctcgctggagagcgacggccgagcggagcgggcacagatggcacggctg
cagagggagttggacgaggtgaacacagctgcaggtgagacccggaggacgctcggggtg
gcacaggatgagctggcgtcgttcagcgaggagctggctaacctctaccatcacgtttgt
gtgtgcaacaatgagacgcccagccgcgtcacactcgacttctacagagaggggaaagac
agtaatgaggacaaagataggaaagacggcaaagaggagaaaccagacaacacgagctcg
actgaaacccccgctagccctggttcggcctcagtgagagactcgaggaaagagccgatg
gacgtgtgcgtcctggcggcgatgattcgggagcagatgcggcacctgcagcaggccgtg
gagcgaggcacacagctggcgaggcagaggctggcacctctggagctcgcagctgtgcct
gataaagagcaggcagcctgcatggaggagatcctcaaactcaggtcactgctgagcacc
aaacgggaacaaatcgccacgctcagggccgtgctcaaggccaacaaacagacggccgag
gtcgctctcgccaacctgaagagtaagtacgagaacgagaagaccatagtgacggagacc
atgatgaagctcaggaacgagctgaaggctctgaaagaggacgcggccacgttctcctcc
ctcagagccatgttcgccaccagatgtgatgagtacgtgactcagctggacgacatgcag
aggcagctggcggccgctgaggacgagaagaagaccctgaactcgttgttgcgcatggcc
atccagcagaaactcgcactcacgcagcgcctcgaggacctcgagttccacaacgagcag
gagcgcaggggaagtgctgccgccgcctcggcccgcgccaaaagacccttctctaagagc
aagaacctgcacgtaagtcccactccgtcctgtagaggccgtcctctgccccacggcatt
gtgggtagtcctgtggtgttctgcacctga
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