Pangasianodon hypophthalmus (striped catfish): 113540319
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Entry
113540319 CDS
T05759
Symbol
ajuba
Name
(RefSeq) LIM domain-containing protein ajuba
KO
K16682
LIM domain-containing protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113540319 (ajuba)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113540319 (ajuba)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113540319 (ajuba)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
113540319 (ajuba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
113540319
NCBI-ProteinID:
XP_026792556
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MEKIGTKLKQKFKLADSGSVKFSKKKNELSNTNNNSNSVSGAPPVVTHLSPATSPSPAST
VQFSLTCSPSIEASSGVRSAKVVNSQRVSTCVASTTSPSVPEESGPSLEHHPVTLAPLRR
RSPQQRVSCYLPDTVEGRGACDQSRRTDLPQGEHADPQGTYSPNSRVALNQRRYSLELQQ
LVRRQQLLAQPPLSSMPPPYPTPSPVTRSGSAEPSFLPEPERHKRLSLQEALFYKRWSSG
GEPWDSGRPASLSHPPVRSHEGAGATCLFPSGPALSPCSSFSLQESVLASPRSSFASSTA
SGGGGGGGGGGGGGTSGSPIGSPCSSNRTSGISLGYDSRHVSGPAQPLHFSSTQLGGTTT
GHVYPTSGPGKAPPIEVWRDYLERTSGIGGGFQDGRHSYPPAGSSPAATEWWSGTEQRGP
RTESTGERMRHSDLPGTHYQQELTRLLLRDMTLEGEEQLGGLALREQPLSTSAPPAANVS
VALKPQEEQVSLREPPSALDRQEFFGTCVKCGKGVYGADNACQALDSLYHTRCFTCVSCG
RTLRNKDFYNVGGSVYCKEDYMFSGFQAAAEKCCVCGHLILEQILQALGNSYHPGCFRCT
VCSKTLDGVPFTVDYLNNVYCVADYNRTFAPKCAACLQPILPAEGSEEILRVVSMNKDYH
FECYHCEECGKQLSDKPGSQCFPLDSHLLCHSCHMSRVCASHNLPPHNTH
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaattggtaccaaattgaagcaaaagtttaaactggccgattctggcagtgtc
aagtttagcaaaaagaaaaatgaactctccaacacaaataacaacagtaacagtgtaagt
ggtgcaccgccagttgtgacccacttgagcccggcaacaagcccgtcacctgcgagtacg
gttcagttcagcctcacctgctcaccctccattgaggcatcttcaggcgtcagatcggca
aaggtggtcaactctcagagggtgtctacctgtgttgcctccaccacctcaccatctgta
ccagaagaatctgggccttcgcttgaacaccacccagtgactcttgctcctttgcggcgc
cgctcgcctcagcagcgcgtgtcttgctacctgcctgacactgtggaaggccgaggtgcc
tgtgatcagtccaggcgtaccgatttgccccaaggtgagcatgccgacccacaaggtact
tacagcccaaattcgcgagtcgccctgaaccagcgccggtattctctggagcttcagcag
cttgtgagaaggcagcagctccttgcccaacccccactgtcttccatgccgcctccatac
ccaacacctagcccagtcacccgctcaggttctgcagaaccaagctttctgcctgaacca
gaacgccacaaacgcctctccctgcaggaggcactgttctacaagcgctggagctctgga
ggagagccatgggacagcggcaggccagcatcactttcacatcctccagtgaggagccat
gaaggtgctggggctacctgcctctttccttctggaccagcactgagcccctgctcctcc
tttagcctgcaggagtcagtgttagccagcccacgctcaagctttgccagcagcacagct
agtggaggaggtggtggtggtggtggtggtggaggagggggcacaagcggaagtcctatc
ggtagcccgtgcagcagcaaccgcaccagcggcattagccttggctacgacagtcgccac
gtgtctggccctgcccagccgctgcacttctcctccacacagctaggtggcaccaccact
gggcatgtgtacccaacatctggccctgggaaagcacccccaatagaggtgtggagggac
tatctagaacgaacatcagggatcggaggaggttttcaagatggccgccactcataccca
ccagcgggcagttccccagcagcaacagagtggtggagtggcacagagcaacggggacca
aggacagagagcacaggggagcggatgaggcactcagacctgccaggtacccactaccag
caggagctgacccgcctcctactgagggacatgacattggagggagaagagcagttggga
ggactagccttgagggagcagcctctgtccacctctgcacctcctgcagccaatgtatct
gtggctctgaaacctcaggaggaacaggtgtctctgagggaaccaccatcagccctggac
cggcaagaattttttggaacatgtgtgaagtgtggaaaaggtgtgtatggtgcagataat
gcttgccaggctctggacagtctgtatcacactcgctgcttcacctgtgtgtcctgcggt
cgcacacttagaaacaaggatttctacaatgttggtggatcagtgtactgtaaggaggat
tacatgttttctggcttccaggcagcagcagaaaaatgctgtgtgtgtggccatctgatc
ctggagcagattctgcaagccctggggaactcgtatcacccgggctgtttccgctgtacg
gtctgctccaagacgctggatggcgtgcctttcacagtggactacctcaataacgtctac
tgcgttgcagactacaacaggacattcgctcctaaatgcgctgcctgtttacaacctatt
ttacctgctgagggcagtgaggagattctcagggtggtatccatgaacaaagactatcac
tttgagtgctatcactgtgaggagtgtgggaagcagctctctgataaaccaggctctcag
tgcttccccctggactcccacctcctctgccactcctgtcacatgagcagggtgtgcgcc
tctcacaaccttcccccacacaacacacactaa
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