Pangasianodon hypophthalmus (striped catfish): 113542274
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Entry
113542274 CDS
T05759
Name
(RefSeq) cingulin-like
KO
K06102
cingulin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113542274
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Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_tail_1
Laminin_II
HrpB7
Motif
Other DBs
NCBI-GeneID:
113542274
NCBI-ProteinID:
XP_026795469
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MSASASGRKTPVDYGVQIRFINDLQDTGGGGRRDGSGKSSSRYGVAVRVQGIAGQPYVVL
KDGKKGDSYGVQLRNPSYNSLPRRREDGIEDGQYPQYSTSDGSSLRRAQSHGSLLDRESD
YNNSVNEFRRPNGDGRSGSYANLDGRIGVGMERNQWGGSHQAGLNGSLEKENLRGLGSYY
ESSSDAVKTPRDRRTKSGGSSSAGQAGGVGGSSRGRTPGVSAGNRPNAATSVLSSAQLVP
PNEYTSPPSSSPASGYSRPSRTSGSSKITAMPSSDLNNDWSTVDAHVTPDLLMDQSQSSG
SEFSSEEDQIQQIIYGVLRQGSSDSDAAIKRRVRVICDKIQGLKMNRSDLVLKAELEQSL
DENINLQEQLNRKKTELDQTHSEMIQLRMDRENAESRVRQLEDQLTGLQEELRRETGNRA
ETDVMQAELLDLRNELADMVARHQRLEDALRQRERELTALKGALKEEVSTHDREMETLRQ
QYSQDMEKLRTSMAQVSQSQASIEAERQRVNSTVRSLQQQLEESKEEASHWREQFQSTRD
ELRSTKQELLQARLDKEEFEEELKELQERLNTMKRQIPDEKQSETLNQELERCRASLKQA
EAEVEKLKRDLDKKTMEIISLKKTNQELDAEQKYEINRLKDQSRKDKEELTKAHEKTKQL
ADPALVESLRGEMRAVRGEAERLRSQLLLAEEDLQKERDRLASSQSEMNTVSNEREAMEE
ANARLKDKLARLESTLQQQVSQNLEEEQELQSENRKLRQQLEEAKRSSTKLSQEKEEALR
ALEERDKERDALRKENTQLDEQKKQHEKTVDKLNKEIERLAADSSVSVRLVQSQFDEQKE
KWKKEQQELQKINKEKISELEKTQITLRSLQEELSRQKKELQSFCEEKDNAVLDREMFIN
RIKHLEGELESQRNTFNDRARDIRSMEDKVKRLELELDEEKNSVELLTDRVTRSRDQIEQ
LRSELMQERSSKQDLELDKNALERQLKEYKSRIKDMEGQSRSSTNVSQLESKLQDLEERL
RNEERDKTAALSSQRRLERKLKELTMTLDEDRQQITEQRDQLALRVKALKRQVDEGEEEI
ERMEGLRRKAVRDMEEQMEQKDALQTRVTALENELKRKIQQARHVSVGSPGLSSDDDDEG
LFDSSTITSILTESNLQTSSC
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatcagcctcgggtagaaaaaccccagtggattatggggttcagatccgcttc
ataaatgacctgcaagatacaggaggtggagggcgtcgagacggctcggggaaatcctcg
tcccgctatggcgtggctgtcagggtgcagggcatcgcgggccagccatatgtagtgctc
aaggatggaaagaagggagactcttatggagttcagctccgaaacccatcttacaacagc
ttgcccaggaggcgggaggatggaatagaggatggccagtatcctcagtattccacctca
gacggcagctcgttgcgacgggctcagtctcacggctctctgctggaccgagagagtgac
tacaacaactccgtaaacgagtttaggcgccctaatggagatgggcgctcgggcagctat
gccaacttggatggcaggatcggcgtaggaatggaaaggaaccagtggggaggctcccac
caagcagggctgaacggctctttagagaaggaaaatctgagaggactaggcagctactat
gaatcttcttctgacgctgttaaaactccacgtgacagacgcaccaaaagtggaggaagc
agttctgctggacaagctggcggtgtcgggggctcctccagggggcgcactcctggtgtc
agtgcaggaaacaggcctaatgctgcaacttctgtcctttcttctgctcagctagtgcct
ccaaatgaatatacttctcctccatcatcctcacctgcttcaggttacagcagaccgagc
cgaacctccggatcttccaagattacagccatgccttcctctgatttaaataatgattgg
tccacagtagatgcgcatgtgactcctgatcttttgatggatcaaagtcagagctcaggg
tcggagttcagcagtgaggaggatcagatccagcagataatctatggtgttctacgacag
gggagcagcgatagcgatgctgcaatcaaacgcagagtgcgagtcatctgcgataagatc
caggggcttaagatgaacagatcagaccttgtacttaaggcagagctggaacagagtctg
gatgaaaatattaatctgcaggaacagctgaacaggaagaagacggagttagatcagaca
cattctgaaatgattcagttacgtatggacagagagaatgctgagtctcgtgtcagacag
ctagaggaccaactgacagggctgcaagaggagctgaggagagagacgggcaacagagca
gagacggacgtgatgcaagcggagttgctggacctgcgcaatgaactggctgatatggta
gcacgtcaccagaggctggaggacgctctgagacagagagagcgggagctgactgcactg
aaaggtgccctgaaggaggaggtgtccacccatgacagagagatggaaactcttcgacaa
caatacagccaagacatggagaaactaagaaccagcatggcacaggtttctcagtctcag
gcaagcatagaagcagagcgccagcgtgtgaactctacagtacgctccctacagcaacag
ctggaggagagcaaagaggaagccagccattggagggagcagttccagagcaccagagat
gagcttcgcagcaccaaacaagagcttctccaggctcgtttagataaagaagagtttgaa
gaggagctaaaggagcttcaggagagactgaacacaatgaaacggcagatccctgatgag
aaacaaagtgaaactctcaaccaggagctggagcgttgccgtgcatccctgaagcaagca
gaagccgaggtagagaaactaaagagggacctcgacaagaagactatggaaattatttca
ttgaagaagaccaatcaggaactggatgccgagcaaaaatatgagatcaacaggctaaag
gaccaatcacggaaagataaggaggagctgactaaagctcatgagaaaaccaagcagctt
gccgatcctgcactggtggagtctctgcgtggggaaatgcgtgctgtacgtggagaggca
gagcgtctgcgcagtcagctgcttttggctgaggaggatctacagaaagaaagagataga
ctcgcctcatcccaatcagaaatgaacacggtctcaaatgaacgagaggcaatggaggag
gctaatgcacgcctcaaagacaaacttgcacgtctggagtccactctgcaacaacaagtt
tcacagaacctggaggaagagcaggagctgcagtcggagaacaggaagctgaggcagcag
ctggaagaggccaaacgcagcagcaccaaactgagccaggaaaaagaagaagcactgaga
gcactggaggagcgggacaaggagagggatgctctccgcaaggaaaacacacagctggac
gaacaaaagaaacagcacgaaaagacagtggacaaactcaacaaagagatcgagcggttg
gctgctgattcgagtgtgtctgtgcggctggtacagtctcagtttgatgagcagaaagaa
aagtggaagaaggagcagcaggaactgcagaagatcaacaaggagaaaatcagtgagctg
gaaaaaacccagatcactctgcgatctctccaggaggagttgtctcgtcagaagaaagag
ctgcagtcgttctgtgaggaaaaggataatgctgttctggacagagagatgttcataaac
cgcatcaaacacctggagggagagctggagagccaacgcaacacattcaacgatcgtgcc
cgtgacatacgcagcatggaggataaagtgaagcgcttagagctggagctggatgaggaa
aagaacagcgtggagcttctcacagacagagtaaccaggagccgagaccagattgagcag
ctgcgttcagagctaatgcaggaaagatcatccaaacaagacctagagctggacaaaaat
gccctggagagacagctaaaggagtataaatcccgtataaaagatatggagggccagtcc
cgtagttccactaatgtttctcagctagagagcaaactacaggatttggaggagcggcta
cgtaatgaagaaagagataaaactgcagcactgtcctcacaacgccgcctggagaggaag
ttgaaagagctgaccatgaccctggatgaggatagacagcagatcactgagcagagagac
cagcttgctctgcgtgtgaaggcattgaagaggcaggtggatgagggagaggaagagata
gagcggatggagggattgcggaggaaagcagtaagagacatggaggagcaaatggaacaa
aaagatgcattgcagactcgagtcacagcactggagaatgaactcaagaggaagatccag
caagcccgacacgtatcagtgggctcaccaggtctcagctcagatgatgacgatgaaggc
ctgtttgactcatccaccatcacctccatcctcacagagagcaatctacagaccagctcc
tgctag
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