Pangasianodon hypophthalmus (striped catfish): 113542563
Help
Entry
113542563 CDS
T05759
Symbol
clip1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
113542563 (clip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113542563 (clip1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113542563 (clip1)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113542563 (clip1)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
113542563 (clip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
113542563
NCBI-ProteinID:
XP_026795976
LinkDB
All DBs
Position
Unknown
AA seq
2283 aa
AA seq
DB search
MSTAKPSGLKAPSKISRPAGTGTTKTSPSTAAKAVPGDKASSENQDAGEEFKVGDRVWVN
GNKPGYIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQSEPLRGIFTRPSKLSRT
EGEANGTTTAPASPTPSTTAPPTAPLVTPAAAPAAAPTAAPATAPTTAPEAAPTTTPAAS
ATTKKATKPASNLTRSNSESVSNLSEAGSVKKGERELKMGDRVLVGGTKAGVVRFLGETD
FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKATA
RKATTPAGLKRSPSSSSISSMSSVASSVSGKPSRTGLLTETSSRYTRKISGTTALQEALK
EKQQHIEQLLAERDLERAEVAKATSQVGEVEQELTSLRQGQEQYVAEMEAKMDQLRALVE
AADKDKVELLNQLEEERRKVEDLQFRVEEACITKGDLETQTRREHALLKELEQSLLFEKT
KAEKLQRELEDSRVATVSEKSRILELERDLALRDKEVAALRQHLEAGPGQATSAGDPTAP
VLQEELGLLRTQLSSQAASHEMALSALRTKLEAEAKAHCEALAQLQASSALLSKDNEQLR
ARLAEAEKENAEVIELWRSKLASAITSHQQAMEELKASSGKGPGDSQAAELVRLRETLER
LKVEHKLQLEESLVKHSAEAKRWTQDVDELRKQLHAVTEEKERLVESLRTNLESAEDQHL
VELEEALGKLHNAEIRVKELEEDNSKLGHQVEEKTQEVQDQNTLIQSLRSQQSQGDQEVH
SLLARVEEAESKARMQEGKVTEVTSMLDNKQKELDRLQQNLASLQQTKSSLEQELADLKQ
KVTASLDEQSASSQAVQKLQEMLGKKEEQCTSLSSESEKLKIQLSGLEAKLKSGEEKLEQ
LTKDKAKLEHDISELIKSSGDSSTQLTKMNDDLTQKERRLEELQNQLSEQKELVARSEES
RSQEQARAKQEMKDTSERHQEEVSNLQEKIRQLEKNVEETHAKVHEAQASGEKALASALQ
NHAKELQELQGQVETAQQQLCLSEEKCQKLKEEVEELVPFKEKAQSLTTELTCSMQGAEK
LASEVGDLRLLSERLSKERDEVRAQKENAEKQILEYRSKISSLEEVQKDLSSKNDELKAS
NEQVTNEIKELRSTNKQLHEEKSSLNNEKEQLSKDVQNAIQIQEELKAEIGSMKETKAQH
LIQIEDLEKHKAEQQEVILKYQQEVQHHEKNSADLAQKHTKACEDRDKFQEELRSCQEEL
QSSRLLCAKNEELQSKLQAEKEELSATNAKLQAEIEVLHNENEKVGSDLKTAISDKESLA
AEKSKLQNQLDAMKTTLEQFSRDNAELQASKNSFARMLEEIKTSREVTDSERLLLMEEKE
NLLETQRKMSSEKQELTKQIEVLVEKLRLSTEEAKAANEKIQTDTAAFAQEKQMINTQLS
EAEKIVQTLEEEKISLKSALEKQNNEQQHLEQEMSSLKEKYEEEISEKASVLAEKNQSEA
DLLSEKNSLKSELDKMKQINEQIDSEKMKLRQDNDDLQTLLQKKSSDVESLEKSNVSLTE
QNQKLQLNLDHMKEEYTKNADSFEKEKISLNSVIEELKKTNSDLLQKAEHLSDQNRSLSE
AKNTLEVHQQALEIDKNELSVVKENLSKKVEELMNKVTDSEKEKASLLEVKSKLDGELVA
IRMEKQKAEMEQQLLSTKVEQLWNSLNDTCLEKKTRLQNLNQTSVSSCEKVEEIFSALQK
VSEEKTSLAKEIELLKTQQKRSDEDRSDMAVAKEVLTSKIAELENTTKCLVKEKTDLLES
RVSLEQEVLSLHQSAETGDKKCSEYLIKIEELKKSQLELEAKLQNLRNDNVKLEEQQQAA
EKQVTLLSKAKDEIVSSLAAVQAERDALQAGKEEANVMVTQLEAQNKSALAKQLEAAESA
GHTAQALDKLTQEKLALQKEKLAAEALVQEFKNAKEDMQCQLDNLSKQSSQYQQELSKSK
EQLSSEKERISSLCKEIEELKKAASENALAVEAVKQEKAKLAEELSSSQKENDSQQKLKE
HLERLRSQMKDMEKRELTLKNESDKEKSALQQSIQKNSALILEKNRELETLRSEVSGLRS
ESAAANTLQSTVKSLESDKAQLQERVRTLEKSLTAAQTSSPADIPTAGSPALDEMREAKE
TAECQVEFLNSVIVDLQRKNEELKSKLEKMAEAALNGNTASEMDNHESLSESKTKKKLPP
RLFCDICDCFDLHDTEDCPTQEQLPDSPPHTTYHGSASEERPYCDTCEMFGHWTESCNDD
QTF
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggccaagcccagcgggctcaaagcccccagcaagatcagcagaccagctggg
accgggaccaccaagacgtccccgtcaactgctgctaaagcagttccaggtgacaaagct
tcatctgagaaccaggatgccggtgaagagtttaaagtcggggatcgagtgtgggtgaac
gggaacaagccaggctacattcagttcctgggagagacccagtttgccccgggacagtgg
gccggcattgtgttggacgagccaataggaaaaaacgatggctcggtggcaggagtgcgc
tactttcaatccgagcctttgaggggtatttttacacgaccttccaagctttctagaact
gagggtgaagctaatggaacgacaacagcacctgcgtctccaacaccctctacgacggca
ccaccgacggcaccactggtcactccagcagccgctccagcagccgctccaacagccgct
ccagcaactgctccaacaaccgctccagaagctgctccaacaaccactccagcagctagc
gcaacaaccaaaaaagctaccaagcctgcctcaaacctgactcgctctaattccgaatca
gtgtccaacctgtcagaggcagggtcagtgaagaaaggagaacgggagctgaagatgggc
gaccgcgtcctggttggtggtaccaaagctggtgtagtccgcttcttaggggaaacagat
tttgccaaaggcgaatggtgtggagtcgagctggatgagcctttagggaagaacgatggt
gcagtggctggaaccaggtacttccaatgtcagcccaagtatggcctttttgccccagtg
cacaaagtaacgcgcattggcttcccttccactactccagccaaggcaaaggccacagcg
cggaaggcgactacaccggcaggtttgaaacgcagcccgagctcctcctcaatcagctcc
atgagttctgtggcctcgtctgtgagcggcaagcccagccgcaccggtctgctgacggaa
acatcatcacggtacacacgaaagatttcggggaccactgcgctgcaggaggctctgaag
gagaagcagcagcacatcgagcagctcctcgccgagcgtgacctggagcgggcagaggtt
gctaaagccaccagccaagtaggagaagtggagcaggagctcaccagtctcagacaaggc
caagaacagtatgtggctgagatggaggccaaaatggatcagctgcgtgccctggtggag
gctgcagacaaggacaaggtggagcttttgaatcagctagaggaagagaggagaaaagtg
gaggaccttcagtttcgtgtggaagaagcttgtattaccaaaggagacttggagacgcag
accagacgggagcatgccctccttaaggagctcgagcaaagtctgctctttgaaaagacc
aaagctgagaaactccagagggagttagaagactctagggttgctacagtctctgagaag
tctcgcatccttgaactggaaagggaccttgctttgagggacaaagaagtggctgccctt
cggcagcacttggaggctggtcctggacaagcaacttctgctggggacccgacagctccg
gtcctccaggaagagctcggtttgcttcgtactcaactctcctcccaagctgctagccat
gagatggcactatctgccttgcgtacaaagctagaagcagaagcaaaagcacattgtgag
gctttggctcaactccaggcctcttcggcacttttatcaaaagataacgagcagcttcgt
gcccgattggccgaggcagaaaaggagaacgcagaagtcatcgagctatggcgctccaag
ctagcttcagccatcacttctcatcagcaagccatggaggagcttaaggcctcctcaggt
aaggggcccggagactcccaggcagccgagcttgttaggttgcgagaaactttggaaagg
ctaaaggtggagcacaaactacaattagaagaaagtctagttaagcacagtgctgaagct
aagaggtggacacaagacgtcgacgagctccggaaacagctgcacgccgtgactgaggaa
aaggagcgtctggtggaatctctccgcactaacctagagagtgcggaggatcagcacctg
gtcgagttggaggaagctttgggcaagctacacaatgctgagatcagggtaaaagagcta
gaggaggacaactctaaactgggacaccaggtggaggagaaaactcaggaggtccaggac
caaaacactttaattcagtcccttcgctctcaacagagccaaggtgaccaggaggtccat
agtctgttagctcgagttgaggaagcggagagcaaggcccgcatgcaagaaggaaaggtt
actgaggtgacctccatgctggacaacaagcagaaggagctggatagactgcaacagaac
ctggcctcactgcagcaaaccaagagctcgttggagcaagaacttgctgacttgaaacaa
aaagttacagcatccttggatgaacagtcggcgtcttcacaagctgttcagaagttacag
gagatgctcggtaaaaaggaagaacaatgcacatctctttccagcgaatccgaaaagctc
aagattcagctgtctggtttggaggcaaagttgaaatcaggtgaagagaagcttgagcag
ctaaccaaagataaagccaagcttgaacacgacatcagtgagctgataaagtcatctgga
gacagctctactcagctgaccaagatgaatgacgatctcactcagaaagagaggagactc
gaagaacttcagaatcagctttcggagcagaaggagttggttgcccggtctgaggagagc
aggagtcaggagcaggctcgagcgaagcaggagatgaaggacaccagcgagagacaccag
gaagaagtttccaacctacaggagaagatcagacagctggagaagaatgttgaggagact
cacgctaaggtccatgaagcccaggcctctggagagaaagcacttgccagtgccttacag
aaccatgcgaaggagctacaggagctacagggtcaggttgaaacagcacaacagcagctc
tgcctctctgaggagaagtgccaaaaacttaaagaagaggtggaagagttggtgcccttt
aaagaaaaggctcagtctctcactactgaattgacttgttccatgcaaggggctgagaag
cttgcttctgaggttggcgatctaaggttgttgtctgagcgtctatctaaggaaagggat
gaagttcgtgctcagaaggaaaatgcggaaaagcaaattttagaatatcgctcgaagatc
tctagcctggaggaggttcagaaggatctctcatcaaaaaatgatgagctaaaagcgtct
aatgaacaagtaacaaatgaaattaaggaactacgttccaccaataaacagctgcatgaa
gaaaagtcatctctcaacaatgagaaagaacagctttccaaagatgtacagaatgcgata
caaatccaagaagaactgaaagctgagattggaagcatgaaagagactaaagcacagcac
cttattcaaatagaagatctcgaaaagcataaagcggagcaacaagaagtcatactgaaa
tatcagcaggaggttcagcatcatgagaaaaatagtgcagacctggctcaaaagcacacc
aaggcctgtgaggatagggataagtttcaggaggagcttagatcctgccaggaggagctg
cagtcctctagattgctgtgtgcaaaaaatgaagagcttcagtcaaagctgcaggctgag
aaagaggagctctctgctacgaatgctaagttgcaggcagaaatcgaagttcttcataat
gagaatgaaaaggtgggatcagatctcaaaactgccatttcagataaagagtctcttgcg
gctgaaaaatcaaaacttcaaaatcaactcgatgccatgaagacaacactggagcagttc
agcagggacaatgctgagctccaggcctccaagaacagctttgccagaatgcttgaggaa
atcaaaactagcagggaagtcacagactctgagaggcttttactcatggaagagaaggaa
aacctcctcgaaacccagaggaaaatgtcctccgaaaagcaggagcttactaaacaaata
gaagtgctggttgaaaagttgcgtctcagtacagaagaagccaaagctgccaacgagaag
atccagaccgacacagcagcttttgctcaggagaagcaaatgattaacacacagctctca
gaggctgagaagattgttcaaacccttgaagaggaaaaaatcagcttaaaatctgctctc
gaaaagcaaaataatgaacagcagcatttggaacaagaaatgagcagcttgaaggagaag
tatgaagaggaaatatcggaaaaggcttctgtcttagcagagaaaaatcaatcggaagct
gacttattaagtgagaagaacagtctgaaatcagaactggacaaaatgaagcagataaac
gagcagatagattcagagaagatgaaactgaggcaagataatgatgatttacagactctt
ctgcagaaaaagagctctgatgtagaatctctagagaagtccaatgtcagcttaactgaa
caaaaccagaaattacagctcaacttggatcacatgaaggaagaatatacaaaaaatgct
gattcctttgaaaaggagaagatttccttgaacagcgtgatagaggagctcaagaagaca
aacagtgatctgcttcagaaagctgaacatctttcagatcagaacagatcactctctgag
gccaagaacaccttggaagttcatcaacaagcactagaaatagataagaatgaattatct
gttgtaaaggaaaacctttctaaaaaagttgaggaactaatgaataaggttacggattct
gaaaaagagaaagccagccttttggaggtgaagtctaagcttgatggtgaacttgtggcc
atcaggatggaaaaacagaaggcagaaatggaacaacagttacttagcaccaaagtagag
caattatggaactcattaaatgacacgtgtttggagaaaaaaacacgtttgcaaaacctt
aaccagacttcggtttccagttgtgaaaaagttgaagagatatttagtgcacttcagaaa
gtcagcgaagagaaaacctctcttgccaaagaaatcgagcttttaaagacccagcagaag
agaagcgatgaagacagatcagatatggccgttgcaaaagaagttctcacttccaaaatt
gcagaactggagaacaccaccaagtgccttgttaaggagaagaccgaccttctggaatcc
cgtgtatctctggaacaggaagtcctgtctcttcatcagagcgcggaaacgggtgacaag
aagtgctctgaatatctgattaaaattgaagaactgaagaaatcacagcttgagctggaa
gcaaagttacaaaaccttcgtaatgacaacgttaagctggaggagcaacagcaagctgcg
gaaaagcaggtgacgcttttatccaaagccaaggatgagatagtctccagcctggctgca
gtgcaagctgagagggacgctctacaggcgggaaaggaggaggccaacgttatggtgacc
caacttgaggcccaaaacaaaagtgctctagcaaagcagcttgaggctgcggagagtgct
gggcacacagcacaggccctggacaaactgactcaggaaaagcttgctttacagaaagaa
aaactagcagcagaggcacttgtccaggagtttaaaaatgccaaagaagacatgcagtgt
cagctggacaatctgtcgaaacagagctcacaataccaacaggagctgagtaagtccaaa
gaacaactgagctcagagaaggagaggatcagcagtctttgcaaagaaattgaggagctg
aaaaaagcagcatctgaaaacgccctggctgtggaagctgtgaaacaggaaaaggccaag
ctggctgaagagctgtccagcagccagaaggaaaacgacagccagcaaaaactcaaggag
cacttggagcgcctcaggagtcagatgaaggacatggaaaagagggagctcaccctgaag
aacgaatcagacaaggagaaatctgctttacagcaatctatccagaaaaacagtgccttg
attttagaaaagaacagagaattggaaacgctgaggagtgaggtatcagggctgcgtagc
gagagtgccgctgcaaacaccctccagagcaccgtgaaatctctggaaagtgataaagct
caactgcaggagcgagtgcgcaccctggagaagagcttaacagcagctcagacgtcgagt
cccgcagacatccccacagcagggtctcctgctctggacgagatgagagaggcaaaggag
acagccgagtgtcaggttgaattcctgaactcggtcatcgtggatctgcagcgcaagaac
gaggagctgaaatcgaagctggagaagatggccgaggcagcacttaatggaaacacagcc
agtgagatggacaaccacgaaagcttgtccgagtctaaaaccaaaaagaaactgccaccg
cgcctcttctgcgacatctgcgactgtttcgacctccacgacacagaggactgtcccacg
caggagcagctgcctgattctcctcctcacacgacctaccatggcagcgccagcgaagag
cggccatactgcgacacctgcgagatgttcggccactggaccgagtcgtgcaacgacgac
cagaccttctaa
DBGET
integrated database retrieval system
