Pangasianodon hypophthalmus (striped catfish): 113543107
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Entry
113543107 CDS
T05759
Symbol
nefm
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113543107 (nefm)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
113543107 (nefm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DUF1664
Filament_head
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
113543107
NCBI-ProteinID:
XP_026796954
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MSYSVDVLGSPFRRVMDTRTSYSRSSGGSVSSGFRSQTWSRATPISSVAYKRTMNAESMD
LGMDLTTPSSALNEKEQLQGLNDRFAVYIDKVHFLEEQNKQIETEINALRRKQVSRTQLG
EENERELQELRAAIEQLHSDKARLHLDAERLQDDIQRLRERLEDEARVRSDTEAMTRTLK
KEAGDATLAKAELEKKIQALQDEISFVRGDHEEEVGELLAQLQASHVVSAEKREWQKADI
TDALKEIRAQLEGHSNRNLQQVEDWFMCRYAKLTEAAEQNKDAIKSARDEISDYRRQLQA
KTVELEAARGTKESLERQLSDIEERHNSDLASLQETIHQLDNELKSTKWEMARHLREYQD
LLNVKMALDIEIAAYRKLLEGEETHFSTYPYRQTVTKGPKVKAEPPKLRVQHKFVEEIIE
ETRVEDEKLEMEEALAEMAAELSEKKEDEGEEEKGEEEAEEEAEEKEGEEEEVVAATQAK
VSASAPADEAEEAETKEGDKEEGEEEGKEEEEGEEEKEEEKGEAAEEGEEGEGEEEAEVE
ETVLSTKAPESKASPEKEKAEEEGAGEEQEGKEESDEKAAETEEKESEKKDEAEKEDKKE
KDDKETKTDKAESPKAESPKAPSPKPESPKALSPKSESPKASSPKSESPKASSPKSESPK
ATSPKSESPQAPKAEEAKKETPKPESPKIESPKKETATDEPLKKEETKPETDEKPSKDEK
SEEKKADKKEDTEKADKDKKETEKKEPEKKDVISNGVDESPTKDDPSQKVVITKTVETIT
TGEDGAKHVTKSVTVTETVKAVDETVEEKMAATK
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagctactcggtagacgttctcggaagtcccttccggagagtgatggacactaggacg
agctacagccgcagcagcggtggctcggtctccagcggcttccgctcgcagacatggtcc
cgggccaccccgatctcatccgtagcctacaagaggacgatgaacgcggagagcatggac
ctgggcatggacctgaccacgccgtcttctgcactcaacgagaaagagcagctgcagggt
ctgaacgaccgcttcgcagtgtacatcgacaaggtgcacttcctggaggagcagaacaag
cagatcgagacagagatcaacgcgctgcggcggaagcaggtttcccgcacacagctgggc
gaggagaacgaacgggagctgcaggagctccgcgccgctatcgagcagctgcacagcgac
aaggctcgcctgcatcttgatgccgagcgcctgcaggacgacatccagcgcctgcgcgag
cgtctggaagacgaagcccgtgtgcgctccgacaccgaagccatgacccgcactctgaag
aaggaagccggagacgccaccctggccaaagcagaactcgagaagaagatccaggccctc
caggacgagatctcattcgtccgcggcgaccacgaggaagaggtcggcgagctgctcgca
cagctccaggcatctcatgtcgtttccgccgagaagagggagtggcagaaggcggacatc
accgacgccctgaaggagatccgcgcccagctcgagggtcactccaaccgcaacctgcag
caggtcgaagactggttcatgtgccgctacgccaaactgacggaggccgcggagcagaac
aaggacgccatcaagtccgcccgggacgagatctcagactaccggcgccagctgcaggcc
aaaaccgtggagctcgaggcggcccgcgggaccaaagagtcgctggagaggcaactgagc
gacatcgaggaacgacacaactccgatctggccagtcttcaggaaaccatccaccagctg
gataacgagctgaagagcacgaaatgggagatggcaagacatctgcgtgaataccaagac
ctgctgaatgtcaaaatggccctagatatagagattgcagcatacaggaaactacttgaa
ggagaggaaacccacttcagcacatacccttaccgccagactgtcaccaaaggccccaag
gtcaaagcagaacccccaaaactgagggtccagcacaagtttgtggaagagatcattgag
gagactcgagtggaagacgagaaattggagatggaagaggccttggcagagatggcagca
gaactgtctgaaaagaaagaagatgagggtgaggaagaaaaaggagaggaggaagctgaa
gaggaggctgaggagaaagagggagaagaggaagaggttgtcgctgccacccaggccaaa
gtgagcgccagtgctcccgctgatgaggctgaggaagctgagactaaagaaggtgataag
gaagaaggtgaagaggaaggaaaggaagaagaagaaggtgaggaagaaaaggaagaagaa
aagggagaagctgcagaggaaggtgaggaaggagaaggtgaggaggaagcagaagtcgag
gaaaccgtgttgagcaccaaggcacctgagtcaaaggcctcaccagagaaggaaaaggct
gaagaagaaggtgctggagaagaacaggaaggaaaggaagaatctgatgaaaaagcagca
gaaactgaggagaaagaatcagagaaaaaggatgaggctgagaaagaggacaaaaaagaa
aaagatgataaggaaaccaagactgacaaggctgagtctcctaaagcggaatcaccaaag
gctccatctccaaagcctgaatctccaaaggctttatcaccaaagagtgagagcccaaaa
gcttcttctccaaagagtgagagcccaaaagcttcttctccaaagagtgagagcccaaaa
gctacttctccaaagagtgagagcccacaggccccaaaagcagaggaagccaagaaagaa
actccaaaacctgaatctccaaaaattgagagccccaagaaggaaacagccacagatgag
ccactgaagaaagaagaaacaaaacctgaaacagatgaaaaacccagcaaggacgaaaag
tctgaagagaagaaggcagacaagaaagaagacactgaaaaggcagataaagacaaaaag
gagacagagaagaaagagccagagaagaaagatgtgatctcaaatggagtggatgaaagc
cctaccaaggatgaccctagccagaaggtggtcatcaccaaaacagtggagaccatcacc
actggcgaagacggagccaagcacgtcaccaagtctgtcacagtcactgaaacagtgaaa
gcagtagatgagacagtcgaggagaaaatggcggccaccaagtaa
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