Pangasianodon hypophthalmus (striped catfish): 113545184
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Entry
113545184 CDS
T05759
Name
(RefSeq) estrogen receptor beta-like isoform X1
KO
K08551
estrogen receptor beta
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113545184
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
phyp03310
]
113545184
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
113545184
Nuclear receptors [BR:
phyp03310
]
3. Estrogen like
3A. Estrogen receptor
113545184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERbeta_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
113545184
NCBI-ProteinID:
XP_026800186
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MSESPERDVPLLQLQEVDSSRAAGCTLSSRMNSSSPAVAMESHPICIPSPYADIGHDFTT
LPFYSPTLLGYSGPPLPECPSVRQSLSPTLFWPSQSHMAPLALHRPQSHCQQNQPSNGTW
QELTSRSYTANDNSKPVGKRSVECEESFSSSESKTDMHFCAVCSDYASGYHYGVWSCEGC
KAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMMKCGMRRDRGSYNRG
GSQQRRVARSPARAVASSQRQPERKAAPPTRVKEVFTATLSPEELIARIMEAEPPEIYLM
KDMKKPFTEANVMMSLTNLADKELVHMISWAKKIPGFVELSLFDQVHLLECCWLEVLMLG
LMWRSVNHPGKLIFSPDLILSRDEGSCVQGFVEIFDMLLAATSRFRELKLQREEYVCLKA
MILLNSNMCLNSAEADDEPQSRTKLMQLLDSVTDALVWAISKMGLSFQQRSTRLAHLLML
LSHIRHASNKGMDHLHCMKMKKVVPLYDLLLEMLDAHIMHSSRLPHSTVAIVPEENPGAP
EPYSCSSQQWAQSVMEGPMELSQNAIQLKDISLDLETQRTGPNQLYKALKCIAL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtctccagagagagacgtccctctgctgcagctgcaggaggtcgattccagc
cgagcagcaggctgcactctttcatccagaatgaattcctcctccccagccgtggcaatg
gagagccaccccatctgcattccttcaccctatgcggacattgggcacgatttcaccacc
ctgcctttctacagccccaccctgctcggctacagcggacccccacttcctgaatgcccc
tcagtgcgtcagtcgctcagccccacgctcttctggccctcccagagccacatggcacct
ctggcactgcatcgcccacaatcccactgccagcaaaaccagccgagcaatggcacctgg
caggagctcacatcacgcagttacacagccaacgacaacagcaaacccgtggggaaacgg
tcagtggaatgtgaggagagcttcagttcctcagagagcaaaacagacatgcacttctgc
gctgtgtgcagtgactacgcctctggctaccactatggtgtctggtcctgtgagggatgc
aaagccttctttaaaaggagtatccaaggacataacgactacatctgtcctgcaaccaac
cagtgcaccattgataagaaccggcgcaagagctgccaggcctgtcggcttcgcaagtgt
tatgaagtagggatgatgaaatgtggtatgcgtcgggaccgtggcagctacaatcgtgga
ggctcacagcagaggagagtggcacgctctcctgccagagcagtagcgagtagtcagaga
cagccagaacggaaagcagcaccacctaccagggtaaaggaggtttttactgccacactg
agcccagaggagctgatagctcgcatcatggaagcagagccaccagaaatctatcttatg
aaggacatgaaaaagccctttactgaggccaatgtcatgatgtcactcaccaacttggct
gacaaagaacttgtccacatgatcagctgggccaagaagatcccaggttttgtggagctc
agcctctttgaccaggtgcatctgttggagtgttgctggttggaggtcctgatgttgggg
ctgatgtggagatctgttaatcatcctggaaagctcattttctccccagatcttatcctc
agcagggacgagggcagctgcgtacagggctttgtggaaatctttgacatgttgctggct
gccacgtcccgattcagagagctgaagttacagagagaggagtatgtctgtctcaaggcc
atgatcctcctcaactctaacatgtgtctgaattcagctgaggcagatgatgaacctcag
agcaggaccaaactgatgcagttactggactccgtgacggacgccctggtctgggccatc
tcaaagatgggcttgagctttcagcagcgttccacacgcctggcccacctgctcatgctg
ctctcgcacatacgtcatgccagtaacaaaggtatggaccacctgcactgcatgaagatg
aagaaggtagtgcctctgtatgacctgctcctggagatgcttgatgcccacatcatgcac
agctcacgtctgccccactccactgtggccatcgtgcccgaggagaaccctggtgcaccg
gaaccctacagctgctcctctcagcagtgggcacagtcagttatggaggggcctatggag
ctcagccaaaatgccatacagctcaaggacatcagtttggacctggagactcaaagaact
ggaccaaatcagctgtataaagccttaaaatgcatagctttgtga
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