Pangasianodon hypophthalmus (striped catfish): 113545487
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Entry
113545487 CDS
T05759
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113545487
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
113545487
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF6775
Motif
Other DBs
NCBI-GeneID:
113545487
NCBI-ProteinID:
XP_026800668
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MDPPPSLSLALLAGSEEEDQHVPHPLSGMSHTSISSNYPGSNHSNHTGGTSSLERLNGTP
SPTGPNLPPVSLPKLPLVTTPQLPAPIPNALHPTSTPLSSCLGSQHSLSGETSPIYNALF
YSSHSPTGERERERDRGCKHRQASPLVHRRDSNPFTEIAMSSCKYTGGVMKPLSRLSASR
RNLIESDSGSDSKEGGAATGHGAVPSSSSSTTAPQNPPEIVISSKEDPPYGHVYELESSA
NQMSIYHQNHTLSESRGTLGLTGSGGNGRRGGTGGETGRTASKAPKRKNQNIGYKLGHRR
ALFEKRKRLSDYALIFGMFGIVVMVIETELSWGVYSKSSMYSLALKCLISLSTIILLGLI
IAYHAREVQLFVIDNGADDWRIAMTMERVLLIALELLVSAVHPVPGDFKFVWRARLAFTY
IPSQAEADLDMVLSVPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKVHFNTRFVMKTL
MTICPGTVLLVFSISLWIIAAWTVRVCERYHDAQDVTSNFLGAMWLISITFLSIGYGDMV
PHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAAN
VLRETWLIYKHTKLMKKIDHSRVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKM
QSVMYELMSELNDRSEDLERQMLSLEQRVEQLTAGFSALPAHLSATLNAQHAALIRLLQE
RDAKTPSPIVPALITPTPSANNQASEESPNTSTSNC
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggatccccctccctctttgagcttggcccttcttgccgggagcgaagaagaagatcag
cacgttccccaccctttgagtggtatgtcccacacgtccatttccagcaactatccaggc
agcaatcactctaaccacacgggtggaaccagcagcctggagcggcttaatggcacaccg
tcaccaaccggcccaaaccttccaccagtctccttgcccaagcttccactggtgacaaca
ccacagctgccggcgccaatccccaatgcactccaccccaccagcacgccactctcatcc
tgcctgggcagccagcatagcctgagtggtgaaacgtcgcctatctacaacgccctcttt
tattcctctcactcaccaacaggcgagcgggaacgggaacgggatcgaggttgcaagcac
aggcaggccagtccactggtgcaccgcagggacagtaacccgttcaccgagatcgccatg
agctcatgtaagtacacgggtggcgtgatgaaacctctcagccgtctcagcgcctcgcgc
aggaacctcattgagtctgacagtggaagtgacagcaaagagggtggggctgcgactgga
catggggcagtgccctcctcctcctcctctactactgcaccccagaacccacctgagatt
gtcatctcctccaaagaggatccaccatatggacatgtctatgagcttgagtcatcggct
aatcagatgtctatctatcaccagaaccacaccctctctgagagtaggggcactctgggg
ttgacaggaagtggggggaatggacgacggggcgggacaggtggagagactgggaggaca
gcctccaaagctcctaagcgcaagaaccagaatattggctacaagcttggccaccggagg
gcgctgttcgagaaaaggaagagactcagtgactatgcgctcatctttggcatgtttggc
atcgttgtcatggtgattgagacggagctttcctggggtgtctatagcaagagctccatg
tattccctggcattgaaatgtcttatcagcctgtctaccatcatcctcctcggcctcatc
attgcttaccatgctcgagaggtgcagctctttgtcatcgataacggcgcagacgactgg
cgcatcgccatgaccatggagcgagtactgttgattgcgctggagctgctggtctcagct
gtgcacccagtgcccggagacttcaagtttgtgtggcgcgctcgactcgcattcacgtac
atcccctcgcaggcagaggctgacctggacatggtgctttccgtgcccatgttcctccga
ctctacctcatcgcccgtgttatgctcctccatagcaagctgttcaccgatgcctcctcc
cggagcataggggctctcaacaaggtgcactttaacacacggtttgtgatgaagaccctg
atgactatctgcccgggcacagtgctactggtcttcagcatctccctgtggatcattgca
gcctggactgtacgagtatgtgagcggtaccatgatgctcaggacgtgaccagcaatttc
ctgggagccatgtggctcatctccatcaccttcctctccattggctatggagacatggtg
cctcatacctactgtggcaagggagtgtgtcttctgactggcattatgggggcaggctgc
acagcgctggttgttgccgtggtagcaaggaagctggagctgaccaaggctgagaagcat
gtgcacaacttcatgatggacacacagctcacaaaacggataaagaatgcagcagccaac
gttcttcgagaaacatggctgatctacaaacacaccaagttgatgaagaagatcgaccac
tcgcgtgtgcgaaagcaccagaggaaattcctgcaagccatccaccaactgcgaagtgta
aaaatggagcaaagaaaactgagtgaccaggccaatacactagtggacctctcaaagatg
cagagcgtgatgtatgagctcatgtctgagctgaatgaccgcagtgaggatctggagcgc
cagatgttgagcctggagcagcgagtcgagcagctcacggcaggtttcagtgctctgcct
gctcacctctcagccacgctaaatgcacagcacgctgcgctcatccgcttgctgcaggag
cgagatgccaagacccccagccccatcgtgcccgccctcatcacacccacgcccagtgcc
aacaaccaggcctcagaggagagccccaacaccagtacatccaactgctga
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