Pangasianodon hypophthalmus (striped catfish): 113545567
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Entry
113545567 CDS
T05759
Name
(RefSeq) structural maintenance of chromosomes protein 1A-like
KO
K06636
structural maintenance of chromosome 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04110
Cell cycle
phyp04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113545567
04114 Oocyte meiosis
113545567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113545567
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113545567
Meiosis-specific proteins
Cohesin complex and associated proteins
113545567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
SlyX
NPV_P10
Motif
Other DBs
NCBI-GeneID:
113545567
NCBI-ProteinID:
XP_026800767
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFRKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAYVSMVYQEDNDEERSFTRVIIGSSSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRANVQLQLFKLYHNECEIEKLNR
ELAQRNKEIDKDRKRMDRVEEELKEKKKELGRMMRDQQTVEKEIKEKDAELNQKRPQYIK
AKENTAHKIKKLEAARKSLQNAQKCYKKRKADMDELEREQRAVETARQEFEERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPQIKKALQYACGNALVCENVEDARRIAFGGPYRHKVEDEVFFEFCKEIGVRNIREFEE
EKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVIMWEQTVKKDESEIERLKK
EEQRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGGANKELTQLQKEVTA
IETKLEQKRSDRHNLLQACKMQDIKLPLRSGTMDDISQEEGSSQEESLSSSQKTSSTVLA
XXXFKQTKYSKLSSQLKDSLSEEEIKGEMNTLQQRLNEQQSILQRISAPNMKAMEKLESV
RDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSA
QAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFV
LDEIDAALDNTNIGKVANYIKDQSIQNFQAIVISLKEEFYTKADSLIGVYPEQGDCVISK
VLTFDLSQYPDANPNPNE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaagttaatcgagatagaaaatttcaaatcgtacaaaggaagacagata
atcgggcctttccgtaagtttactgcgattattggacccaatggatcagggaagtcgaac
ctcatggacgccatcagcttcgtgctggcggagaaaaccagcaacctccgcgtgaaaacg
ctgaaagatctgattcacggcgctccggtggggaaaccggcggctaatcgggcctacgtt
agcatggtgtaccaggaggacaacgacgaagagcgctccttcaccagagtcatcatcgga
tcctcgtcggagtatcgcattaataataaagtagtgggattgccggagtacagcgaggag
ctggagaaactcggcattctcatcaaggccaggaacttcctggtctttcagggtgcagtg
gagtccatcgccatgaagaaccctaaggagcgcacagctctgttcgaggagatctctcgc
tccggtgagctggctcaggagtacgaccggcgcaagaaggagatggtgaaggctgaggag
gacacgcagttcaactaccaccgcaagaagaacatcgctgctgagcgcaaagaggccaag
caggagaaagaagaggccgagcgctatcagaggctgaaggacgaagtcgtgcgtgcgaac
gtccagctccagctcttcaagctctaccacaacgagtgtgagatagagaaactgaaccgc
gagctggcgcagcgcaacaaagagatcgacaaagaccgcaagcgcatggaccgcgtggag
gaggagctgaaggagaagaagaaggagctcggcaggatgatgagagatcagcagaccgtg
gagaaagagatcaaagagaaggacgcagagctaaaccagaaaaggccgcagtacatcaaa
gcgaaagaaaacacggctcacaagatcaagaagctggaggccgcgcggaaatccctgcag
aacgcgcagaagtgctacaagaagcgcaaggcggatatggacgagctggagcgcgagcag
agagccgtggagacggccaggcaggagttcgaggagcgcatggaggaggaggcgcagagc
cagggccaggacctgcagctcgaagagaaccaggttaaagcgtatcaccgtctgaaagaa
gaggcgagcaaacgagccgctactctggcccaggagctggagaagtttaaccgcgatcag
aaagctgaccaggaccgtctagacctggaggagaggaagaaagtggagacggaggctaag
atcaagcagaagatcagagagattgaggagaaccagaagcgtattgagaagctcgaggat
tacatcacgaccagcagacagtctctggatgaacagaagaggatggaggaggagctcaca
gaggaggtggagcaagccaagaggaggattgatgagattaatatggagcttaaccaggtg
atggagcagctcggtgacgctcgtatagaccgacaggagaacagcagacagcagcgcaaa
gccgagatcatggagagcatcaagagactctatcccggatcagtgtacggaaggctcatt
gacctgtgccagcccactcagaaaaagtaccagatcgccgtaaccaaagtgctgggcaaa
aacatggacgccatcatcgtggactcggagaagaccggccgtgactgcatccagtacatt
aaagagcagagaggagaaccggaaaccttcttacctctggactatctcgaggtcaaaccc
acggatgagaagctgcgtgagctgcgcggtgccaagctggtgatcgacgtcattcgctac
gagcctccgcagatcaagaaagctctgcagtacgcctgcgggaacgcgctggtgtgtgag
aacgtagaggacgcccgcaggatcgctttcggaggaccgtacaggcacaaggtggaggac
gaagtgttctttgagttctgcaaggagatcggagtgaggaacattcgcgagtttgaagag
gagaaagtgaaaaggcagaatgagatcgcaaagaagcgcttggagtttgagacccagaag
actcgcctggcgatccagctggattatgagaagaaccagctgaaggaggaccaggagaag
gtcatcatgtgggagcagacggtgaagaaggacgagagcgagatcgaaagactaaagaag
gaagagcagaggcacatgaagatcatcgatgagaccatggctcagcttcaggacctgaag
aatcagcacctcaccaagaagtcggaggtcaacgacaaaaaccacgaaatggaagaaatt
cgtaagaaactcggtggagccaacaaagagctgacacagcttcagaaggaggtcacggcc
attgagacgaagctggagcagaagcgcagtgacagacacaacctgctgcaggcctgtaaa
atgcaggacatcaaacttcctctcagatcaggaaccatggacgacatcagccaggaggag
ggaagctcccaggaagaaagtctgagcagcagccagaaaacgtccagcaccgttttagcc
nnnnnnnnntttaaacaaacgaaatactcaaaattgagctcacaattaaaggactcgctg
tcggaggaggagattaaaggtgagatgaacacccttcagcagaggctgaacgagcagcag
agcatcctccagaggatcagcgcccccaacatgaaggccatggagaagctggagagcgtc
cgagacaaattccaggagacgagtgacgaattcgaagccgctaggaagagggcaaagaaa
gccaagcaagcgttcgagcagatcaagaaggagaggttcgatcgcttcaacgcctgcttc
gagtccgtcgccaccaacatcgatgagatctacaaagcgctctcacgcaacagcagcgct
caggcttttctcggaccggagaacccggaggagccgtacctggatgggatcaactataac
tgcgtggctcctggtaaacgtttcagacccatggataatttatcaggaggagagaagact
gtagctgctctcgctttactcttcgccatccacagctataaacctgctcctttctttgtg
cttgatgaaatcgacgcggctctggacaacaccaacattggcaaggttgctaactacatt
aaagaccagtccatccagaacttccaagccatcgtcatctcgctgaaggaggagttttac
accaaggccgactcgctgatcggcgtgtatcccgagcaaggagactgcgttatcagtaag
gtcctgacctttgacctctcccagtatccagacgcaaacccaaaccctaacgagtaa
DBGET
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