Pangasianodon hypophthalmus (striped catfish): 113545762
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Entry
113545762 CDS
T05759
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04814
Motor proteins
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113545762
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113545762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113545762
03036 Chromosome and associated proteins [BR:
phyp03036
]
113545762
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113545762
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113545762
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
113545762
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
113545762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
DUF4407
SPX
Motif
Other DBs
NCBI-GeneID:
113545762
NCBI-ProteinID:
XP_026801111
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MSVDGGKPVKVGSLVEVIGKGQRGTVAYVGATLFASGKWVGVILDEPKGKNDGTVQGKSY
FTCKENHGIFVRQSQIQLIEDGGSSATSPDTPESGIAKVPRKEIAETPGKGTKLTPATLK
KAAVRRSTKWNTLGRLSYSNSLPSLIMTGRPSGGGSDLSGSVLVENEPATPSQSALGAPM
MPQPSRTTSDAPSSPAPSISSKEEEALRAQVKDLEEKLETLRIKRTEDKAKLKELEKHKI
QLEQLQEWKSKMQEQQNELQKQLKEAKKEAREAQEAKDRYMEEMADTADAIEMATLDKEM
AEERVESLQQEVESLKEKVEELTMDLEILKHEIEEKGSDGAASSYQVKQLEEQNARLKEA
LVRMRDLSSSEKQEHVKLQKQMEKKNSELETLRVQKEKLQEEMKQAEATIDELKEQVDAA
LGAEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQENARETELELREQLDLAG
ARVREANKRVEAAQETVADYQQTINKYRELTTHLQEVNRELTNQQSATAEQLQQPPAELF
DFKIKFAETKAYAKAIEMELRKMEVHQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIP
RLICKAELISKQAQEKFDLNENIRERSGLRGSAGEQLSFASGLVYSLTMLQAILHKYEQA
LNQCSVDVFKRMGTLHSEMSVHERSLDFLIELLHKDQLDETVQVEPLTKAIKYYQQLYSI
HLADQAEDCTVQLADHIKFIQSALDSMGAELGRLRSFLQPGQEGAELTLLLKDLDTSCGD
IGQFCKKIRRRMPGTDAPGIPAALSYSPQVGEALAESRKQLSCVVAVLQETAAAGAQLIS
TLSEQEGLSAHTLEDGVFKAIEQIYGSHGQNPRECLRQSCSTVIATMNKMATAMQEGEYD
SEKPQRVPPPVEMRSAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRL
SLLEKKLDTSTKDADERVEKIQTKLDETNTLLKKKEKEFEETMDALQADIDQLEAEKAEL
KQRLNSQSRMTIEGLRGTPASGIASIVTGGTTGGVVSGIGSVSGTVQVVDSPLLKEQMDV
QRLAIKHLKNENYRLKAEKMKAQLASLPPLSVPNMAGVMKDGSLSDGISGTLYRKTDLLL
SNLLRMSAGVKVVDITGKTPVSASAQLLEQTARLESLSDALDKLKNEVSEHVVNQQVGAR
VRSDFATFASSTFIKAEGEKKCGTVLVGKVMIPCARGKEQAHSLVLSQHQLQHVHHLLMT
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggatggagggaagccggtgaaggtgggctctctggtggaggtgattggtaaa
gggcagcgtggcactgtggcgtacgttggcgcgacgctcttcgcctcagggaaatgggtc
ggagtcatcctggacgagccgaagggcaaaaatgatggcactgtgcagggcaagtcctac
ttcacctgcaaggagaatcatgggatatttgtccgccagtcacagatccagctgattgaa
gatggaggaagctcggctacttcaccagacacacctgagtcaggcatcgccaaagtgcct
cggaaagaaattgcagagacacctggaaaaggaaccaaactgactccagctacgttgaag
aaggccgctgtgcgccgtagtaccaagtggaatactctgggacgactctcctactctaac
tccctcccctccctcataatgaccggccgtccctctggtggtggctcagatctctcagga
tcagtcttggtggagaacgaacctgccactccttcccagagtgcactgggggctcccatg
atgccacagcccagcaggaccactagtgacgcccccagcagccctgctccctccatctcc
agcaaagaggaggaggctctgcgtgctcaggtgaaagatcttgaggagaagttggagact
ctccgtataaagcggacagaggacaaagcgaagctgaaggaactcgagaagcacaagatc
cagctggagcagctgcaggagtggaagagcaaaatgcaggagcagcagaacgagctgcaa
aaacaactcaaagaagccaagaaggaagcacgtgaggctcaggaagctaaggaccgctac
atggaagagatggcagacacagcagacgctattgagatggccactctggataaagaaatg
gccgaggaaagggtggagtctctgcagcaagaggtggagagtctaaaggagaaagtggag
gagttaaccatggacctggagatccttaaacacgagatagaagagaaaggttcagacggt
gcagcctccagttatcaggtgaaacagctggaggagcagaacgcacgactgaaagaggcg
ctggtcaggatgcgtgacctgtcatcatctgagaagcaggagcacgtgaagctgcagaag
cagatggagaaaaagaactctgagctagagactctgagagtgcagaaggagaaactgcaa
gaggagatgaagcaggccgaggccaccatcgatgagctcaaagagcaggtggatgccgca
ctgggagcagaagagatggtggaaactctgactgagagaaatctggatctggaggagaaa
gtgagagagctgagagagactgtcactgatttggaagcgataaatgagatgaacgatgag
ctgcaggagaatgcacgagagacagagctggaactgcgcgagcaactggacctggcagga
gctcgagtccgagaggccaacaagcgagtggaagcagctcaggagactgtggccgattat
caacagaccatcaacaaatacagggagctcaccactcacctacaggaagtgaatcgagag
ctgaccaatcagcagagtgccacagccgagcagctccagcagcctccggctgagctcttc
gacttcaaaatcaaatttgcggagaccaaagcttacgccaaggccattgagatggagctg
cgtaagatggaggtgcaccaggcgaacaggcaagtgtcactgctcacgtcattcatgccc
gactccttcctgaggcacggaggagatcacgactgcatcctggtgctgctactcatcccc
agactcatctgtaaggcggagttgatcagtaagcaggcccaggagaagtttgatctaaac
gagaacattagagagcgcagtgggctgcgtggatcagcgggggagcagctgagctttgcc
tccggccttgtgtattccctcacaatgctacaggccatactgcacaaatatgagcaggca
ctaaatcagtgtagtgtggatgtgtttaagcggatggggactctgcactctgagatgagc
gtacacgagcgttctctcgacttcctcattgagctactgcataaagatcagctagatgag
acagtgcaagtggagcctctcaccaaggccatcaaatactaccagcaattgtacagcatc
cacctggctgaccaggctgaagactgcaccgtgcagctggcagaccacatcaagtttatc
cagagtgccctggacagtatgggggcagagctagggcgcctgcgttccttcctgcaacct
gggcaggaaggggcagagcttactttgctgctgaaggacctggacacttcctgtggagac
attggtcagttctgtaagaaaatccgcaggaggatgcccgggactgatgcacctgggata
cctgctgcactctcttactctcctcaggtgggtgaggccctggcggaaagcaggaagcag
ctgagttgtgtagtcgcggtgctccaggagacagcagcggcaggagctcaactcatctct
accctctcagagcaggaggggctcagcgcacacacacttgaggatggagtctttaaagca
atagagcagatttacggttctcatggtcagaacccacgcgagtgcctgcgccagtcatgc
agcactgtcatagcaaccatgaacaagatggccaccgccatgcaagagggagagtatgat
tctgagaaaccgcagcgtgtgcctccccctgtagagatgcgttctgctgctttgagagct
gagatcactgatgcggaaggactcggtctcaaactggaggacagagagacagtcatcaag
gaacttaagaagtccctcaaaatcaagggggaggagttaagtgaggcgaatgtgcgtctg
agtttgctggagaagaagttggacacgtctactaaagatgcagatgaacgagtggagaag
atccagaccaaactggacgagacaaacacactgctgaagaaaaaagagaaggagtttgag
gagaccatggatgcactgcaggctgatattgaccagctggaggcagagaaggcagagctt
aaacagagactcaacagccaatcacggatgactatcgaagggctgcgtggaacaccagca
tctggcatcgcctcaattgtcacaggaggcactacaggaggcgtagtctctggtataggg
agtgtatcaggtactgtgcaggtggtggattctcctcttctgaaggagcaaatggatgtt
cagaggcttgcaatcaaacacctgaagaatgaaaactacagactcaaggcagagaagatg
aaggcccagttggcgtctcttcctcctctgagcgtgcctaacatggccggtgtgatgaag
gacggctcactgagtgacggcatttctggaacgctgtaccggaaaacagacctgctgctc
agcaacctgctcaggatgagcgccggcgtcaaagtggtggacatcacaggaaaaacacct
gtaagtgcgagtgctcagctgttagagcagacggctagactggagtctctgagtgatgcc
ctagacaaactaaagaatgaagtatcagagcatgtagtaaaccaacaggtgggagctcga
gttcgctccgattttgccacgttcgcttcatcgactttcatcaaggcggagggggagaag
aagtgtggcaccgttctggtaggtaaagtgatgatcccgtgtgctcgcggtaaagaacaa
gcccactctctcgtcctgtcgcagcatcagcttcagcacgtgcaccacctcctcatgacc
taa
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integrated database retrieval system
