Pangasianodon hypophthalmus (striped catfish): 113546343
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Entry
113546343 CDS
T05759
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1-like isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113546343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113546343
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113546343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
Chlorophyllase2
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
113546343
NCBI-ProteinID:
XP_026801935
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MASVTVGENQLQRIIRDLHDAVAELTKEHAESGEPITDDSPSLHKFSYKLEYLLQFDQKE
KATFLGSRKDYWDYFCDCLAKNKGTNDGIRFVKSISELKTSLGKGRAFIRYCLVHQRLAD
TLQQCLMNQRVTCDWYYARSPFLKSHLNVDIINHLYELNEIQFDVASRGYDLDSEWPAFA
RRTIGSAVPGAHLWRPPSRCSSVNSLVSNYSQQVQEFLPGSTDLGTSFQADLGELGELSS
SAVDDLRVELDQSELRKQQLQEQVHLLTDEATELKQEVADLQMKLLAVESANKKPWKEEA
GKAEVEKLEAGCKTEDWAKQAERLSKELKAQGEKLKESEEALAKLRTSSEKERTIAVQQA
DELQVTVSHLNEALSLKEQEAKNLHTQVQDMQSLLQERVQQLEEVKKKAQLEREELQQKS
SSLKEALDSQIVSLQEQLKAKEIKLSISNQKIQQLENKESQSKKLEEYKTQCVSLMEINA
KLVSTVKRSEESNKELAQTKAALERELTSLKVSEKQTKARLGSTGLTVEEREKLFVEESQ
CLEENTQKSQMKTGASMKERHGQLDNGLSSRENKTVSDQELKDVQNEEVTDHRKDLHLTQ
HSQTGEAASRLALAEAQLDLNMKEVSRLQEEVVDLRARLQMTSEERMKIQALQEVTEASR
ADLSAQTEQLKAQVEGLNHQHIEELLHCREREEALEKKWDTEAQARASLQTELDSMKEEL
DMMKRQNNALALENEEAKEALHRANTETAELGVQVCMLTGQHEEARLRCEELSAKLQELL
VVQNDTQTLKDSVETLRKENVHLQKELKQAEGLTKDMKQQQQRLEGAQEEARSLRKSNQR
ELSALQLQLSEATTYHQNQMKVLNEELLGTRSQMEAEQEKVSSLETRLAELEANNTSLSE
TLEEKNACIAKFDTLLHQKEEQLNQIQSDLAKAQEELALTQKACQDLSENLRRALMEKET
CDLKSSAEIDDLYRTKRNLEERLIELIREKDALWQKSDALEFEQKLRAEEQSDRELPYCS
ECHTQFSWWLRRHNCKLCGRPFCYYCCSHAVSSQQGGVRERCCKDCYTRHGAAERHPQEE
LGSPSRVSYSPLCSTPTRASMPSVTVAPQSPRPDDAAFDIITDEEVNCIYDSDTLPYTTA
LSPGSGQQGTHEISSSTSGGDLTADESEELPSSVQNAEICLLKSGEVTLSVPFSVEEISN
FGQESRELFIKSSCYSLIPITVVTAGPTISWVFSSTPKSISFSVVYRESTDIPLEQAKVL
IPLTRCNSHKDAIRGQVKARNPGEYALIFDNSFSRFISKKVLYKLSVEQTVVYDGSD
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgtaacagttggtgaaaatcagctccagaggataatcagagatctgcatgac
gcggttgctgagttgaccaaggagcatgcggagagtggagaacccatcacagacgacagc
cctagtctccacaagttctcctacaaactggaatacttactgcaatttgaccagaaagag
aaagccacttttctgggcagtagaaaagactactgggactatttctgtgattgcttggcc
aagaacaaagggactaatgatggcatccgatttgtcaagtctatctcagagctgaagacg
tctctgggtaaaggtcgagcctttatccgctactgcctggtgcaccagcgactggcagac
actcttcagcaatgtctgatgaaccagagagtcacatgtgactggtactatgcccgcagt
ccttttctgaagtcccatctcaacgtcgacatcatcaatcacctgtatgagctgaacgag
atccagtttgatgtggcatccagaggatatgatctcgactccgagtggcccgcctttgcc
aggagaactatcggatcagcagttccaggtgcccacctgtggagaccgcccagccgctgc
tccagtgtcaacagccttgtcagcaactactcacagcaagtgcaggaatttctcccaggc
agtacagacctgggtaccagttttcaggcagaccttggagaacttggagaactctctagt
agtgctgtagatgacctgcgtgttgaactcgaccagtcagagctacgaaaacagcagctt
caagagcaggttcatctgcttactgacgaagcaacagaattaaagcaggaggttgctgat
ctccaaatgaagctgcttgctgttgagagtgccaataaaaagccatggaaggaggaagca
gggaaggctgaagtggagaagctggaagctgggtgcaaaaccgaggattgggcaaagcag
gctgaaagattgtccaaagaactcaaggctcaaggggaaaagttaaaagagagtgaagaa
gcacttgccaagctccgcacatccagcgagaaggaaagaaccattgcagtccagcaggct
gatgagctccaagtgactgtcagtcacctcaatgaggcattgtctttgaaagaacaggag
gcaaagaatttgcatacccaggtgcaggacatgcaaagcttgctgcaggaaagagtccaa
cagctagaggaagtgaagaagaaagcacaacttgaacgtgaggaacttcaacaaaagagc
agcagcctaaaggaagcactagatagtcagattgtatcactgcaggaacagttgaaagca
aaggagatcaagctctcaatcagcaatcagaagatccagcagttagaaaacaaggaaagc
cagagcaagaagctggaagagtacaagacccagtgtgtcagcttaatggagatcaatgca
aagttggtcagtacagtaaagaggagcgaggaaagcaacaaggagctggctcagaccaaa
gctgctctggaaagagaactgacctctctaaaagtctccgaaaagcagaccaaggccagg
ctgggttcgactgggcttacagtggaggagagagagaagttgtttgtggaggagagccag
tgtcttgaggagaacacccagaaatcccagatgaaaactggggccagtatgaaggagaga
catggacagctagataatggactaagctccagggagaacaagacagtatctgatcaagaa
ttaaaggatgttcaaaatgaagaggtaacagatcacaggaaagatctccacctaacacag
cactctcaaactggagaagcagcttctagactagctctagctgaagcccaactagactta
aacatgaaggaggtatccaggctccaggaggaggttgtagatcttcgagcccggctccaa
atgacctcagaagagagaatgaagatccaagctttgcaggaggtgactgaggcctccagg
gcagacctttctgctcagactgagcagctcaaggcccaagtggagggcctgaaccaccag
cacatagaggagctcctgcattgtcgggagagggaggaggcactagaaaagaagtgggat
actgaggcccaggctcgagccagcctacagactgagttggactccatgaaggaggagctt
gacatgatgaagagacagaacaatgccctggccctggagaatgaagaggctaaagaggcc
cttcacagagccaatactgagaccgcagagctgggcgttcaagtgtgtatgctgactggg
cagcatgaagaggctaggttgcgctgtgaggaactctcagccaagctgcaggagctgctg
gtagtgcaaaatgacacacagaccctcaaagactctgtggagaccctgagaaaagaaaac
gttcacctccaaaaggagctgaaacaagcagagggtctcacgaaagacatgaagcaacaa
cagcagaggcttgagggggcgcaggaggaggccaggagcttgcggaaaagcaaccagaga
gagctcagcgctcttcagcttcagctgagcgaggcaaccacataccaccaaaaccagatg
aaggttttgaatgaggagctgctgggcacaaggtctcagatggaagcagagcaggaaaaa
gtgtcatccctggagaccagactggcagagcttgaggccaacaacaccagcctcagtgag
acgcttgaggagaaaaacgcttgcattgccaaatttgacacgttgcttcatcagaaagag
gaacagctcaaccaaatacaaagtgacttggcaaaggctcaggaggaacttgctctcacc
cagaaagcctgtcaggacctgagtgagaacctgcgcagagcgcttatggagaaggagaca
tgcgatctcaagtcgtctgcagagatagacgatctttaccgcacaaagagaaacctggag
gaaagacttatcgagcttattcgggagaaagatgcactgtggcagaaatcagacgctctg
gagtttgaacagaagctgcgagccgaggagcagtcggaccgagagcttccttattgctct
gagtgtcacacacagttcagctggtggctacgccgacacaactgcaagctgtgcggtcgg
cctttttgctactactgctgcagtcacgcagtgagcagccagcagggcggcgtcagagag
cgctgctgtaaggactgttacacacggcatggcgcagcagagcgccaccctcaggaggag
ctcggaagtccgtctcgggtgtcatacagcccgctgtgctcgactcccaccagagcctcc
atgcccagtgtcacagtggcacctcagtcccccaggccagacgacgcagcgttcgatatc
atcacagacgaggaggtgaactgcatttacgacagcgacacactgccctacaccacagct
ctgtctccaggaagtggacagcaaggaacacatgagattagcagcagtacgagtggtggt
gacctcactgcagacgagtcggaggagctgccgagctcggtgcagaacgcagagatctgc
ctgctcaagtctggagaagtcacgctgtccgtgccgttcagtgtggaggagatctccaac
ttcggtcaggagtccagagaactcttcataaagtcaagctgctacagtctcatccctatc
accgtggttactgctggaccaaccatcagctgggtgttttcctcgacgccaaagagcatc
tcctttagcgtggtgtacagagagagcacagacataccactggagcaggccaaggttctg
atccctttaaccaggtgtaactctcacaaggatgcaatccggggccaggtgaaagctcgc
aaccccggagaatacgcacttatcttcgacaactccttctccagattcatctcgaaaaaa
gtgctgtacaagctgagcgtggagcaaacggtggtctacgatggcagcgactga
DBGET
integrated database retrieval system
