Pangasianodon hypophthalmus (striped catfish): 113546437
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Entry
113546437 CDS
T05759
Symbol
gabpa
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113546437 (gabpa)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
113546437 (gabpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
113546437
NCBI-ProteinID:
XP_026802122
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MSKREAEEMIEIEIDGQEKQECLEEGIEEQTITASDLITQDIDINEPVGNLKKLLEPRLQ
IALDGYDICLQDIHLHPDHSLFDQGVKTDGTVQLSVQIITKPGEEKLNILEIVKPVETVE
VVIDPDAAAGEEAHLVEDGQVIAVERAAIADETSEQVTRWAAALEGYRKEQVRLSIPYDP
VQWTADQVIHWAVWVMKEFNIEEIEVGGIHIPGRQLCAFSQEEFLQRVPNGEILWSHLEL
LRKYVLASQEQGQEATVTIDQPVQIIPAPVQQAPPTAIKVQKHNKVPRAPRISGEERSSP
GNRTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMN
YEKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNSLVTECEQKKLARVQ
LHGIGQPVNTVALATASGQPVTTVTLATAATLEKDS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagggaggctgaggagatgattgagattgagattgatggacaagaaaaacaa
gaatgcttagaagaagggatagaggaacagaccatcacagcaagtgatctcatcactcag
gacattgatatcaacgagcctgttgggaacctgaagaagttgctggagccccgtctacag
attgctctggatggatatgatatttgtctgcaggacatccatctgcaccctgaccacagc
ctttttgaccagggtgtgaagactgatggcacagtgcagctcagtgtgcagatcatcacc
aaaccaggtgaagagaagttgaatatactagagatagtgaagccagtagagacagtggag
gtggtgatagatcctgacgcagctgcaggggaggaggctcacttggtggaggatggtcag
gtgatagcagtggagcgagctgccattgcggatgagacctcggaacaggtgacccgatgg
gcagccgcactcgagggctatcgcaaggagcaggtccgactcagtattccttatgaccca
gtgcaatggacggcagatcaggtgatccactgggcagtgtgggtgatgaaggagttcaac
attgaggagattgaagtgggaggcatccacatcccgggtcggcagctgtgcgcgttcagc
caagaggagtttctccagagagtgcccaatggagagatcctgtggagccacctggagctg
ctgcgcaaatatgttctggcaagtcaggagcagggacaggaagcaacagtcactattgac
cagcctgtgcagatcatccctgcgcctgtacaacaggccccacccacagccattaaggtg
cagaagcataacaaagtgccccgagctccacgcatctccggagaggagcgcagttcacct
ggcaaccgtacaggtaataatggacaaattcagttatggcagttcctgttggagctgctg
actgataaggatgccagggactgcatttcctgggttggggaggagggcgagttcaaactc
aaccagccagagctggtggctcagaagtggggtcagaggaagaacaaaccaaccatgaat
tacgagaagctcagcagggccctcagatattactatgacggagacatgatcagcaaagtg
cagggcaagcgctttgtctacaaatttgtttgtgacctgagaactctgattggctacagt
gctgctgagctcaacagcctggtgacggagtgcgagcagaagaaactggcacgggtgcag
ctgcacggcattgggcaacctgtcaacacggtcgccctggcaacggcctcaggacagcca
gtcaccaccgtcacactggccaccgctgccacattggagaaggacagctga
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