Pangasianodon hypophthalmus (striped catfish): 113546496
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Entry
113546496 CDS
T05759
Name
(RefSeq) structural maintenance of chromosomes protein 1B-like
KO
K06636
structural maintenance of chromosome 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04110
Cell cycle
phyp04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113546496
04114 Oocyte meiosis
113546496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113546496
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113546496
Meiosis-specific proteins
Cohesin complex and associated proteins
113546496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
113546496
NCBI-ProteinID:
XP_026802199
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MGYLKQIDVDNFKSWRGKQTIGPFKRFTCIIGTNGSGKSNVMDALGFVLGERASSLRVKQ
TKELIHGAHVGKPVSRTASVTMRFSDDNDEETVFSRTISGDSSEYRVNGRQVTLARYTAE
LEKIGIVVKARNCLVFQGAVESIAMMNAKERTKMFERISNSFELANEYDTKLAALQKAKE
DTQFHFNRKRAATAEKKQVFKDKTEAEKYQALVEQLSESKLQLSLFQLYHNERGVNVLME
SLREKQEAVAVKKSVVEEWEQTVKAQKKEHGRLSRELQKLEKEIKSQEETLSHQRPQYIR
AKVNTSHHQRKAEEARTSLLKSQKQQAKKEQELQELEMELAELEKAWRVYEREIEEQAAQ
RGEDVQLEEAQLERYKELKELARKKGAILVQKAEKLHWEVKADREKLEFDKRRKSEVEAN
IKHAEAHRDELNRRAGKLEEYAIASNKALEEQREQERSLGEMLERGRLRTLEVNEELEVV
VQELQNARMDSQENRRQQKRDEIFESLRRLYPDVVYGRLMDLCQPIHKKYQLAVTKVFGH
YMNAIVVSSAKVARDCIQIIKEERAERETFLPIDNLDVKPLNERLREVRGAKMVVDVVQC
SQNAPQLKRVVQFVCGNSLVCENLKDARHVAFDGPERLKTVSLDGTLFSKSGVISGGSVH
LRYKARRWEEKDMSGLKERKEQLSAELRELIKLKRKEAELHQITAQAQGIQTRLKYSNSE
LESIRKKSIPACQAEISRLESELSNLKSQIEMQTNNVQVKDSEVTALQEDVNHMEDTVFS
DFCAEIGVSNIREYERDYVRQQGEIEDKRLQFESQRTRLNTQFEYEQEQLHKQRRLINKM
QESIKNEEDVILTLKEEEEKLLAAVDESQSKLLDLKNKQVEQKLHVNKAKAELDKRISGL
QENSRELVKQQKEMISVETALEHQRLCKHNLLLGCKIEGLPLTVLSGSLDDISDIQVDSE
SVSTATQDIYEREGQMVIDYRSLGDNLKSLTEEQEVMAQLEVLREKVSSLDRLIHVSKPP
NMKALEKMSEVKDSFREVVDAFEASTSVAKKCHQEFEQVKARRFHRFSQCFEHVSLAINH
IYKDLCRNDSAQATLSAENPDEPYLGGISYNCVAPGKRFMAMDNLSGGEKSIAALALVFA
IHSFRPAPFFVLDEVDAALDNTNIGKVTSFIREQSRNNFQVIVISLKEEFYSRSDALLGV
YSEFNDFMSSHLLSLDLTPYPLNDENDKEREMDMM
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggctacttaaagcagatagacgtggacaatttcaagtcatggagaggaaagcagaca
ataggtccgtttaaaaggtttacttgcatcattggtactaatggttcaggtaagtcgaat
gtgatggatgctctggggtttgtgttgggagagagagcctccagtctgcgagtgaagcaa
accaaagagctaattcatggcgctcatgtcggtaaaccggtgtcccgcaccgcctcggtc
actatgcgcttcagcgacgacaacgacgaagaaaccgtcttcagcagaaccatatcaggt
gactcctctgagtaccgggtgaacggcaggcaggtgaccctggccaggtacacagccgag
ctggagaagatcggcatcgtggtgaaagccaggaactgcttagtgtttcagggtgctgtg
gagtccatcgctatgatgaatgcaaaggaacgcacaaagatgtttgaacgcatcagtaac
tcctttgagctggcgaacgagtacgacaccaagctggcggcgttgcagaaagcaaaagag
gacactcagttccattttaatcgcaaacgggcagccactgcagagaagaagcaggtgttc
aaggacaaaactgaggcagagaaatatcaggccctggtggagcagctcagtgaaagcaag
ctgcagctcagccttttccagctttatcacaatgagaggggtgttaatgtgctcatggag
tccctgagagagaaacaggaggctgtcgctgtcaaaaagagcgtagtggaggagtgggag
caaactgtgaaggctcagaagaaagagcatggacgcctgagccgagaactgcagaaacta
gagaaggagatcaagtcgcaggaggaaaccctcagccatcagaggcctcagtacatcagg
gccaaagtgaacaccagtcaccaccagcgcaaggccgaggaggcgcgcaccagcctgctg
aagagccagaagcagcaggccaagaaggagcaggagctgcaggagctggagatggagctg
gccgagctggagaaggcctggagagtttatgagagagagatagaggagcaggcagctcag
aggggcgaggatgtgcagctggaggaagctcagctggagcgttataaggagctgaaggaa
ctggccaggaaaaagggggccattttagttcagaaggctgagaaactacactgggaggtg
aaggctgatcgggaaaagctggagttcgacaaaaggcgaaaaagtgaagttgaggcaaac
attaagcatgctgaagctcatcgggacgagttaaacaggagggcagggaaactggaggag
tatgccatcgcctctaacaaagctctggaggagcagcgggagcaggagcggagcttgggg
gagatgttggagcgcgggcggttgcggacgctggaagtgaacgaggaactggaagtggta
gtgcaggaacttcagaatgctcgcatggatagccaggagaatcggagacagcagaaacga
gacgagatcttcgaaagcctgcgcagactctacccggacgttgtgtatggacgcttgatg
gacttgtgccagcccatccacaagaaataccagctcgctgtcacaaaggtgtttggccat
tacatgaacgccatcgtggtgtcctctgcaaaagtggcccgtgactgcattcagatcata
aaagaagagagagctgagcgagagactttcctccctattgataacctggatgtaaagccc
ctaaacgagcgcctcagggaggtccgcggagccaagatggtggtggatgtggtgcagtgt
tcccagaatgcacctcagctgaagagagtggtgcagtttgtgtgtgggaattcccttgtg
tgtgagaatctgaaagacgcccgccacgtcgcgtttgacggcccagagcgccttaagact
gtgtctttggatggtaccttgttctccaagtcgggggtgatctctggtggctctgttcac
ctgcgctataaggctcggcgctgggaggagaaggacatgagcggcctgaaagagcggaag
gagcagcttagtgcagagctgagggaactaataaaactgaaacgcaaggaggctgagctg
catcagatcacagcccaggcccagggaatccagactcgcctcaaatactccaactccgag
ctggagtccatccgtaaaaaaagcatcccagcctgtcaggctgaaatctccagactggag
agtgagctctcaaacctcaagtctcagatcgagatgcagaccaataatgtgcaggtgaag
gacagtgaggtgacagccctccaggaggacgtcaatcatatggaggacacagtgttctca
gacttctgtgctgagattggagtatccaacattcgtgagtacgagcgggattatgtgaga
cagcaaggagagatcgaggataagcggctacagtttgagtcccagcgcacccgtctgaac
acacagttcgagtatgagcaggagcagctgcacaagcagcgcaggctgatcaacaaaatg
caggaatccatcaagaacgaggaagatgtcatcctcacgttgaaagaggaggaagagaag
ctgctcgctgcagtagatgagtctcagtcgaagctcctagacttaaagaataagcaggtg
gaacagaagttacacgttaataaggcaaaggctgagctggataagagaatcagtggcctt
caagagaactccagggaactggtaaagcagcagaaggagatgatctctgtggaaactgca
ttggagcatcagagactttgcaaacacaacctgctgctgggctgcaaaatcgagggtctg
cctctcacggtgctctcaggatcactggacgacatcagtgacatccaggtggactctgaa
tctgtaagcactgccacacaagacatttatgagcgagaaggacagatggtgattgactac
agatctctgggagataacctgaagagtctgactgaggagcaggaggtgatggcccagctg
gaggtgttgagagagaaagtgtcgtctctggacagactgatccatgtgtccaaaccaccc
aatatgaaggccctggagaagatgagtgaggtgaaggacagcttccgtgaagtggttgat
gcattcgaggccagcacaagtgtagctaagaaatgccatcaggagtttgagcaagtgaag
gccagacgcttccatcgcttcagccagtgcttcgagcacgtttctctcgccatcaaccat
atctacaaagacctctgcaggaacgacagtgctcaggcgactctgagtgcagaaaatcct
gatgagccttacctgggtggtatcagttacaactgcgtggcgcctgggaagagatttatg
gccatggacaacctgtcaggaggagagaagtcaatcgctgcgctcgctctggtgtttgct
attcacagcttccgtcctgctccattctttgtgctggatgaggtggacgcagctttggac
aacacaaacattggcaaggtgacaagcttcattagggaacaatcaagaaataactttcaa
gtcattgtcatctcactgaaggaggagttctattcacggtcagacgctctgctgggggtc
tactctgagttcaatgacttcatgtccagccacctcttgtcactggacctcactccgtat
cccctgaacgacgagaacgacaaagagagagagatggacatgatgtaa
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