Pangasianodon hypophthalmus (striped catfish): 113547088
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Entry
113547088 CDS
T05759
Symbol
gcc2
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113547088 (gcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113547088 (gcc2)
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113547088 (gcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
Rho_Binding
HIP1_clath_bdg
TSC22
Motif
Other DBs
NCBI-GeneID:
113547088
NCBI-ProteinID:
XP_026803100
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MEKDPDAECGTSASCTASGKSKLDTLSKDDLIKFAKKQMGAMKLLKSKCADLEEKVEALN
VLQGGTSNDSVIQELTERMDAVLLEKAETQQMLVLLRKENEKLRNQTEESMEKLAALQQK
LDHAEPDHTEKIKLMEEQFETSETKYREELEFFKKLASENEELQRCRLQEDFNSKIEAIR
QEYESKISDLEQYLELAKKEWTTENETLKDTHQIALRKTQEDIDSFQETISRLTRQHEDE
VRYLEEQLEISAAHFDMERERLLLVQEELSEQIALKESYLQDVQEEEEDLNRRTQKPSEL
IKALDSSVLEDPENEMDKLRLALQDLQSQNTMLKEELTFLTNVKTELEGDLKHLKEEFSM
EREELEFKINELQMTKEEGEICTEKEVNFMNAVETVRLEEHDKILQELKELHKAEMKELE
ARLISNNEREKEAIVQEAQDLQHTCKVLSEEKKAIVSEYEHTKEILRNIEMELGDRTSDF
VKKYNAMKEQAAVSVQELEEKLREKDRIIEKLECLEQTQDNSEQKLWQKEDVVPEDKEVH
MFMPSDKENKVRLEEILIYIEKIQDECKHRGMDTAQITLQKLEDLSVTLEGALDEKKSLR
SCIAKLESQLSLSAHEKDQLAKGCSTSVEGLAVSNEEMAELQRDHQSALQEQDALRKDLE
TSEEKLFEARKQICYILAQNYSVKIDDEEDISVLLNHLVSSVEEDKSTCIASNEEKAKLQ
KDLQAVSDERNNLKMVIENSERRHFDTQRRVCEILEQHYSVKIVREEDMSVLLNHLVSSI
HEEKKNYIMLNEEKIKQQRDLLSMVEERDDLKRCMETHERKLSDARKNVCEMLEQNYSVN
IDEEEDISVLLKHLLSKVQEEKLILTQELDEKAVQLSQQNQQAELSDDGYLQKTSLNEVL
SDTENLQGDQNEQVEITGRLVGQEHEEPAVEGGAQETDDMKRLQQKLSEKESTVAYLKEE
ISHLQESKLSTLNENMRQIEFLEKESKEKEERLNKFKAVAVKARKELDNSKKEVTRLKEE
LDSLRTERDKMSDSMKAIIHGAEAYKNLMIDYDKQTELLDKEKEKLDASEKLVGDLTKRL
HVAVEENKQLSSEREDLMAHIATLQSNVRQLEAQALEMHKLKSSVERDLEAERLLKEQKT
KEHVCAVKEVEELHILLQKQKQQLQQTEQELEQLRKDAQQSTLLDMEMADYERLVKELNL
QLSDKDRLLEEQERQTQAQREREERLNQEIASLKSLVDIGEEKTAKVKQLLVKTKKDLAD
AKKEEASQMILLSSLKGELEAIQQQLENYKIQCSELTAGRHRLQEQLKSVSDQHQKSVTS
YQHQVTTLQNDLSSTKAEFESTKSEFESYKVRVHNVLKQQKNKSSAQSDGDFSKQDRENM
ETMLEQLRSKLQESQLNAQSCNAELQQLQTEYDTLLERHNKMLQQTITKEAELRERLLLL
HSENVALKSEHSQSVAQLTAQTETLRSSFREQLHHLQDEHRSTVETLQHQITSLETQLFQ
LQKEPATSAAQQQSKKPQSEKKLSDLPLFEMNMAREEGEGMETTETESVSTAGTPPPSLE
QLLTSPDPKHEPFVWQVEPTKEELTSKLNTATRSMEHMNSLLHESEATNAILMEQINLLK
SEMRRLERNQEREKSVANLEYLKNVLLQFIFLRSGSEKQALLPVIHTMLQLSPEEKSKLS
AIAHGEEEAAASRGSGWTSYLHSWSGIR
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggacccggatgcggagtgtggcacctccgcttcatgtacggccagtgggaaa
tctaagctggacacattgtccaaagatgacctcattaaatttgcaaaaaagcagatgggt
gcaatgaagttgttaaagtcaaagtgtgcagatttagaagagaaagttgaagcactgaac
gttcttcaaggtgggacttccaatgattctgtaatacaggagctgactgagagaatggat
gctgtactgcttgagaaagcagagactcaacagatgcttgtgttactgcgcaaagaaaat
gaaaagctgagaaaccaaacagaagagtcaatggagaagttggctgctctccagcagaaa
ctggatcatgctgaaccggaccacactgaaaagataaagcttatggaagaacagtttgaa
acctcagaaacaaagtacagagaggaattggagttctttaaaaaattggcaagtgaaaat
gaagaactccagagatgtagacttcaggaagactttaattctaaaattgaagcaattcgt
caagaatatgagagcaagatatctgatttggagcagtatctggaattggctaaaaaagaa
tggacaactgagaatgaaactcttaaggatactcaccagatagctctccgaaaaacccaa
gaagatatcgacagttttcaggaaacgatttcaaggctgacccgacagcatgaagatgag
gttagatatctggaagaacagcttgaaatcagtgctgcacattttgatatggagagagag
aggctgttgctggtccaggaagagctatcagagcaaatagcacttaaagagagctacctc
caggatgttcaagaggaagaggaagacctcaacagacggacccaaaaaccatcagaattg
attaaggcattggattcttctgtattagaagacccagagaatgaaatggacaaattgaga
ttagcactgcaggatttacagtcacaaaacacaatgcttaaagaggagctcacctttctc
actaatgtgaagacggagcttgagggtgatctgaaacatttaaaggaggagttcagcatg
gaaagggaagaactggagttcaagattaatgaattgcaaatgactaaagaggaaggtgag
atttgcactgaaaaggaggttaatttcatgaatgcagtagagactgtacgtcttgaagaa
catgataagattcttcaagaattaaaagagttacacaaagcagaaatgaaagaactagag
gctcgtcttatttccaataatgagcgggaaaaagaagcaattgttcaagaggcacaagat
ctgcaacacacatgtaaggtgctttctgaggagaaaaaagctattgtcagtgaatatgag
cacacaaaagaaattctgagaaatattgagatggaacttggagacagaacgtctgacttt
gtaaagaaatataatgccatgaaggagcaggcagcagtttcagttcaggagttagaggaa
aagctcagagagaaagatcgtataatagagaaactagagtgcttagagcaaacacaggat
aattcagagcaaaaactgtggcagaaggaggacgttgttccagaggacaaagaagtccac
atgttcatgccgtcagacaaagagaacaaggtgagacttgaagaaatattaatatacata
gaaaaaatacaagatgaatgtaagcatagaggtatggacactgcccagatcacacttcag
aagttggaagacttgtcagtgactttggaaggtgccttagatgaaaagaaaagtctgagg
agttgtatagctaagttggagagccagctctctctctcagctcatgaaaaagatcaactg
gccaaaggttgcagtacttcagtagagggcttggctgtgtcaaatgaggaaatggctgaa
ctacaaagagatcaccagtctgcattacaagagcaggatgctctaagaaaggatctggag
actagtgaagaaaaacttttcgaggcccggaagcaaatctgttatatacttgcacagaac
tactctgtgaaaatagacgatgaggaagacatctctgtattgctaaaccatctcgtatcc
agtgttgaagaagataaatctacctgtattgcatcaaatgaggaaaaagctaaactacaa
aaagacctgcaagctgtgtctgacgagaggaataatttaaagatggtaatagaaaatagc
gaaagaagacattttgatacacaaaggcgtgtctgtgaaatactggagcagcattactct
gtgaaaatagtcagggaggaagacatgtctgtattgctgaaccaccttgtgtctagcatt
catgaagaaaaaaagaattacattatgttaaatgaggaaaagattaaacaacaaagagac
cttttgagcatggttgaagaaagggatgatctaaagaggtgtatggaaacccatgaaaga
aaactttctgatgcacggaagaatgtctgtgaaatgctggagcaaaactactctgtgaac
atagatgaagaagaggacatctctgtgttgctgaagcatctcctgtcaaaagttcaagaa
gaaaaactgatattaacacaggagttggatgaaaaagcagtacagttgtcacagcaaaac
cagcaagctgagctcagtgatgacgggtacttacagaagaccagtctaaatgaagttctg
tcagatacagaaaatttgcaaggggaccaaaatgagcaggttgaaataacagggaggttg
gtgggccaagaacatgaagaacctgcagttgaaggtggtgctcaggaaactgatgacatg
aaaaggctccaacagaagctaagtgaaaaagagtccacagtagcctatctaaaggaagaa
atttcccatttacaggaatccaagctatctacactcaatgaaaatatgaggcaaatagag
tttttagaaaaagaaagcaaagagaaagaagaacgtttgaataaattcaaagctgttgct
gtgaaagcaaggaaggaattggacaacagcaaaaaagaggtaactagacttaaagaagaa
ttggactctttgagaaccgaaagagacaaaatgtcagactccatgaaggccatcatccat
ggtgcagaggcctataagaatcttatgattgattatgacaagcaaactgagctgttggat
aaagaaaaagagaaactggatgcatcagaaaaactggttggtgatttgaccaaacgtcta
catgtagctgtggaagagaataagcaactttcttctgagagagaagacctgatggctcat
attgcgactctccaaagtaatgttcgacagcttgaggcacaggctcttgagatgcacaaa
ctcaaatcttcagtggagagagacctggaagcagaaaggcttttgaaggagcaaaaaaca
aaggagcatgtgtgtgctgtgaaggaagttgaggagctccacattttactgcagaaacag
aaacaacagttgcagcagacagagcaagagttggaacagcttaggaaggatgcccagcag
agcactttgttggacatggagatggcagattatgagcgtctggtcaaagagctcaacctg
cagctctctgacaaggacagactgctggaagaacaggaaagacaaacacaagctcagaga
gagagggaggagagactgaaccaggaaatagcatctttaaagtcacttgtggacatcgga
gaggagaagaccgcaaaggttaagcagctgctggtgaaaactaagaaggatttggcagat
gccaagaaggaagaagcatctcagatgatcctgctgtcttctctgaaaggggaattagag
gccattcaacagcagttagagaattacaagattcagtgtagtgaactgactgcaggtcgg
cacaggcttcaggaacaactaaagtcagtgagtgatcaacatcagaagtcagtcacatcc
taccagcaccaagtgaccactttacagaatgatctgagctctacaaaggctgaatttgag
tcaacaaagtctgagtttgagagttacaaggtgcgagtacacaatgtgctcaagcagcag
aaaaataagagctctgctcaaagtgatggtgatttttccaaacaggacagggagaacatg
gagaccatgctggagcagttgaggtccaaactgcaagaaagtcaacttaatgcacagagc
tgcaatgcagagctgcagcagcttcagactgaatatgacacacttttggagcgtcacaac
aaaatgttacagcagaccatcactaaagaggctgaactgagagagcggttactgttactg
cattcagagaatgtagcactaaaatcagagcacagccagtcagtagcacagctaacagca
caaacagaaacattgcgtagtagcttccgggaacagctacaccacttgcaagatgaacat
cgcagcactgtagagaccctgcagcaccagatcaccagcctggagacccagctgttccag
ctgcaaaaggagcctgccacttctgctgctcagcagcagagcaaaaagccacagtcagaa
aagaagctttcagatctgcctttatttgagatgaacatggcgcgagaggaaggtgaggga
atggagacaacagaaactgagtctgtctccacagcagggactcccccacccagtctcgag
cagctcctcacttcacctgacccaaaacatgagccctttgtgtggcaggtggagcccacg
aaggaggagctaactagcaaactgaatacagccacacgcagcatggagcacatgaacagc
ctgttacatgagagtgaagccaccaatgccatcctcatggagcagatcaacctcttgaag
agtgagatgcgtcgtctagagcggaatcaggagcgagagaaatcagttgcaaacttggag
tatctgaaaaatgtgttgctgcagtttatcttccttcgttctggcagtgagaagcaggcg
ctgctgcctgtcatacacacaatgctacaactcagcccagaagagaagagcaaactttct
gcgattgcacatggtgaagaagaggctgcagcatctagaggatccggttggacgtcatat
cttcacagttggtctggcatcagataa
DBGET
integrated database retrieval system
