Pangasianodon hypophthalmus (striped catfish): 113547105
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Entry
113547105 CDS
T05759
Name
(RefSeq) LOW QUALITY PROTEIN: F-actin-uncapping protein LRRC16A-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113547105
Membrane trafficking [BR:
phyp04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
113547105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
113547105
NCBI-ProteinID:
XP_026803129
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MVSEEDISKEVLESVQDAVGRQLKLSLRKKVQLEGKGDKQDNRILALAPHRAFLLSARVP
ARIEQSFNFFDIQAVGSSKTGQLVVDYDKGQLCVKLSSNEEVDEVIAQIGVSIQEHCPGL
NPLRVMKKLSLKPTERTTSLQALWENNPPTDTGPCGAFSRMYWCVCDQMGLPYRAEVQWD
VDTIYLTQDTTELNLQDFIHLETRDLVAIVAVLEYNQWFTKLSLKDYKLPTDLCDQILKV
VARSSRLEELALENTGLKADFAQKLASALSQNPHSALHTLNLANNSVEDKGIVSLSSPLG
KLQSGLKHLNLSKNSLSAKGVNILAQSLCSNSSFFNTLTHLDLSGNTLRGDDLPNLWNFL
SQPNNLHTLDLSNCDCALDLVCSSLLRGSLKHLTVLNMSKSVLSIKKGKELPSSFKQFFS
AALALNTIVLSGTKLPPEALKXLRSAGSQILESCIAEIPNVSSLDISDNGLDSDLTTLLV
WLAKNRSIRQLSLGKNFSNIKSKNLGQVLNSLVLMIQEEESPLSSLSLADSKLKADLSIV
LNAVGGNSSLTRLDISGNGMGDMGAKMLAKALQINTKLRTVIWDRNNVSAQGLQDVAAAL
EKNYTIRFMPVPIMDAAQALKSSPEKTEDALMKVRGQSVNEVKLSMASFLSDRIIDEILE
SLSRSQHTLAEHLSRRSQPLIHHDSEETEVLEEGQLEPENLPPPSSDLLLSPTSKRQSIL
FRMVRPISVAFELEFDLDKALEHVPIHMEDPPRPPPPEPVEAELERPESVCFIDLPETES
PKLQHITKLRPRRKKTNTKPRKAASAPSADMEQTEFVGKVDEGLEDFFAKKVTKIGTKLS
FIKDSGPEGERKRESRMSGFFNLIKSRTSMKSPPTSPHTPTPTPTPAPTNATMPPTTESE
NVESTKPAVKSPVLEHTQEPIKTQIAEKVEPCEPVDTAMTSESKGHAEEGKKREGPHGGR
IRGVQVMGNDFLAQLRAKQEKMKEKASESSSANKAESNHADGDSAAVEKPAQKEHHQDAA
SKSPSPSPLLLKPTAPASVHTPPAKQTLPAAHTGLKASLSPPSSNHKSTPSSHPEHHLSQ
EHLPRSPLSSSSTSANDVSGHLGAVSSTKQSATAQHQKEESSKEEHICVSPGSPPIVLDL
AAEGSVFEPDSPTQPSHAAAAGQRCASLHAFSSTSAAEEKDDRQRTVSLPAQVDLLTPTD
STSSPETLDPSSTDMQLQSSAALQHTDPTQEELSSSEDESVE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggtctcagaggaggacatctcaaaggaagtgctcgagagcgtgcaagatgcggtgggc
cggcagctcaaactgagcctgagaaagaaggtgcagctggagggcaaaggtgacaaacaa
gacaaccgaatcctggctctggctccacatcgggcatttctgctgtcagctcgagttcct
gctaggatagaacaaagcttcaatttctttgacatccaagcagtgggcagcagcaagaca
ggccagttggtggtggactatgataaaggacagctgtgtgtgaagctcagctctaatgag
gaggttgatgaagtcatcgctcagataggagtcagcatacaggagcactgccccggactc
aacccactgagggtgatgaagaagttatctctgaagcccactgagaggacaaccagtcta
caggcactctgggaaaataatcctcccactgatactggaccctgtggtgctttctctcgt
atgtactggtgtgtgtgtgatcagatggggctgccttacagagcggaggtgcagtgggac
gtggacactatctacctcacccaagacacaacagagctcaacctacaggactttatccac
ctggagaccagggacctggtggccatcgtggcagtgctggagtacaaccagtggttcact
aaactctcactcaaggattataaactgcctacagatttatgtgatcagatcttgaaagtt
gtggctcgttcaagcagattagaggagctggctctggaaaacacaggactcaaagctgat
tttgcacagaagttggccagcgctctgagccagaacccgcactcggctctacacacactc
aacctggccaacaactcagtggaggacaaaggtattgtgtctctgagttccccactggga
aaacttcaatctggactgaaacatctgaacctctcaaaaaactccctctcggctaaaggt
gtgaacattctggctcagtctctgtgttccaactcgtccttctttaacacacttacacac
cttgacctgtctggaaacacactgaggggagacgacctgcctaacctgtggaacttcctg
agtcagccaaacaacctgcacactctggacctgtccaactgtgactgtgctctggacctg
gtctgctcttctttactccgaggctctctgaagcatcttactgtcctcaacatgtccaag
agtgtcttgagtattaagaaaggaaaggagctgccctcctcctttaagcagttcttcagc
gctgccctggccctcaacaccatcgtcctctccggcaccaaactgcctccagaggccctc
aagtgactgcggtcagctggatctcagattctggaaagctgtatagctgaaatccccaat
gtctctagcctggatatttcagacaacggtttggactctgatctgacgactctgctggtg
tggctggctaagaatcgctccatcagacagctgtctctgggcaagaacttcagcaacatc
aaatccaagaatctggggcaggtgctgaacagtttggttcttatgatccaggaggaggaa
tctccactcagctctctgtccctggctgattccaagctgaaagctgatttgtccatcgtg
ctgaacgctgtgggggggaacagctccctgactcgcctagacatcagcggcaatgggatg
ggagacatgggggctaaaatgctggccaaggccctgcagatcaacaccaaactcaggact
gtgatttgggacaggaataatgtcagtgctcagggtctgcaggacgtggcagctgctttg
gagaaaaactacactatccgcttcatgccggtgcccatcatggatgctgcacaagctctc
aagtccagccctgagaaaaccgaggacgccctcatgaaggtcagaggtcaatcagtcaat
gaagtaaagctcagcatggcctcgttcctgtccgaccgcatcattgatgagatcttagag
tctctctctcgctctcagcacacactggcagagcatctgagtaggcgtagccagccgctg
atccatcatgattcggaggagactgaggttctggaggaggggcagctggagccagagaac
ctgccaccaccttcatctgacctgctgctgtctccaacctccaagaggcagagcatcctg
ttccggatggtgcgtcccatctccgtggcctttgagctggagtttgatttggataaagca
ctggaacatgtgcccatccacatggaagatccgccccgtcctccaccccctgaacctgtg
gaggcggagttagagaggcccgagagtgtgtgtttcattgatctaccagaaacagagagc
cccaaactgcagcacataaccaaacttcgcccacgcaggaagaagaccaacaccaaaccg
agaaaagcagctagcgctccttcagcagacatggagcagacagagtttgttgggaaagtg
gatgagggcctggaggatttctttgccaaaaaagtcacaaagattggcaccaagctttcc
tttataaaagactcaggtccagaaggggagaggaagcgggaatctcgcatgagtggcttc
ttcaacctcattaaatcacgcacctccatgaaatccccgcccaccagcccacacacaccc
acacccactcccactcctgcaccaacaaatgccaccatgccacctaccactgaatctgaa
aacgtcgaatccacaaagcctgcagtgaaaagccccgtcctcgaacacactcaagaacca
atcaagactcagatagcggagaaagttgaaccatgtgaacctgtagatacagccatgacc
tctgagagtaaaggtcatgcggaggagggtaagaagcgggaggggccacacggggggcga
atccgaggggtgcaggtgatggggaacgactttctggcacagctgcgggcaaaacaggag
aagatgaaagagaaagcaagtgaatcctcatctgcgaacaaagccgaatccaatcacgct
gatggcgacagtgcggctgtagagaagccagcgcagaaagagcaccaccaggatgctgcg
tctaaatctccctctccttctccccttctcctgaaaccgactgctcctgcttctgtccac
acacctccagccaaacaaacccttccagcagcacacactggcctcaaagcctcactcagc
ccaccatccagcaaccacaaatccactccgagcagccacccagagcaccacctgagccag
gagcaccttcctcgcagccccctgagcagctccagcacatctgccaatgatgtctcaggt
cacctcggtgctgtctcctccaccaaacaatctgcaacggctcaacaccagaaagaggag
tcatcgaaagaggaacatatatgtgtctctcctggctcacctcctatagtgctggatctt
gcagcagagggcagtgtgtttgagccagactcacccacacagccatcacacgctgcagca
gcaggacaacgctgcgcctcccttcacgccttcagctccaccagtgctgctgaagagaaa
gatgatcgacaacgcaccgtgtccctgcctgcacaagttgaccttctgactcctacagac
tctacttcatctcctgaaactctggatcccagcagcactgacatgcagctccagtcttct
gctgcacttcaacacacagacccgacacaagaggaactctcaagcagcgaggacgagagt
gtggaataa
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integrated database retrieval system
