Pangasianodon hypophthalmus (striped catfish): 113547643
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Entry
113547643 CDS
T05759
Name
(RefSeq) histidine-rich glycoprotein-like
KO
K17386
platelet-derived growth factor subunit B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04020
Calcium signaling pathway
phyp04510
Focal adhesion
phyp04540
Gap junction
phyp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113547643
04020 Calcium signaling pathway
113547643
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113547643
04540 Gap junction
113547643
09142 Cell motility
04810 Regulation of actin cytoskeleton
113547643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
phyp04052
]
113547643
00536 Glycosaminoglycan binding proteins [BR:
phyp00536
]
113547643
Cytokines and neuropeptides [BR:
phyp04052
]
Cytokines
Growth factors (RTK binding)
113547643
Glycosaminoglycan binding proteins [BR:
phyp00536
]
Heparan sulfate / Heparin
Growth factors/receptors
113547643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
113547643
NCBI-ProteinID:
XP_026803873
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MSSWVVLLVALVACLRLGGAQDPVPLSLVNMVMNSPISSMKDLQELLDVHSVEEEEDEDH
SNGTHKRLPRSLGDVQIAQPAVCKVRTEVMEVTRSMLDRSNANFLLWPLCVEVQRCSGCC
NTRTLQCVPVTTETRHLQMTKIQFINRQPVYEKVILPVEDHLSCSCKSRAVSQTTSTKTT
TSPPPPPKLITKPPISRSQSKEELHRHDDLKHNQRFQLEDRETQWQSKYTLSHTQRVPVH
TPAHTPAHTQGYGSGPFQHTLTHAQGSSTEDASTRHASFGVTRMLSDTTQHVTPIQEHHT
RHSDPEKVREHHTHPGSGDDNIKSTASGEHPEHHRHHHDNHEAATKHQHEPSKSHTAEHH
RSQSDMALQHSGQLEAPVVSFSHVEVIGQSSGQSELSSQSSTPSFHQSEAKDQHQSQSET
DKLSESGQEKTEHHHHHHHHPHHHPTQAATQRAVTNAPAGTSPAPHTPPPAVPQRKRRRK
QKRRMSKSAMRAMIMVMS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgtgggtcgtgctgctcgtcgcgctcgtggcgtgtctgcgacttggcggcgcg
caggaccctgtccctttgtctctggtgaatatggtgatgaactctcccatctcatccatg
aaggacctacaggagctgctggacgttcactccgtagaagaagaagaggacgaggatcat
tcaaatggaacgcataaacgccttcccagaagtctcggcgatgtgcagattgctcagccg
gctgtgtgtaaggtgcgaaccgaggtgatggaggttacgcgatccatgttggaccgaagc
aatgctaacttcctgctctggccactttgtgtggaggtgcagcgctgctcgggctgctgc
aacacacggacgctgcagtgtgtgcccgttactacggagactcgccatctacagatgact
aagatccagttcatcaacagacagcccgtctacgagaaggtcatcttacctgtggaggac
catctcagctgtagctgtaaatcacgcgctgtcagtcaaaccacttcgacgaagaccaca
acgtccccgcctcctccccccaaactcatcaccaaaccccccatctccaggagccaatca
aaagaggagctgcatcgccacgacgacctaaaacacaaccagaggttccagctggaggat
cgagagactcagtggcaatcgaaatacacattgtctcacacgcagagagtgcccgtacac
acacccgcacacacacccgcacacacacagggctacggatccggtccgttccaacacacg
ctcacacacgcgcagggctcaagtacagaagacgcctcgacgaggcacgcgagctttggc
gtaacacgtatgctgagcgacacgacgcaacatgtcacaccaatacaagagcaccacaca
cgccattcagacccggagaaggttcgggaacaccacacacaccctggcagtggcgacgac
aacataaaatccacggcgagcggagaacacccagaacatcatcggcatcaccatgacaac
cacgaagcagcgacaaaacaccaacacgagccgagcaaatcacacaccgctgagcatcac
cgcagccaatcagacatggcgcttcagcacagcggccaactggaagcccctgttgtcagc
ttcagccacgtagaggtcattggccagtcaagcggccaaagcgagctgtccagccaatca
tcaacgcccagttttcaccaatcagaagcgaaggaccagcaccaaagccaatcagagaca
gacaagctatcagagtcggggcaggaaaaaacagagcatcatcatcatcaccatcatcat
cctcatcatcatccaacacaagctgccacacaaagagcagtgacaaacgctcccgctggc
acatctcctgcgcctcacacaccccctccagccgtccctcagcggaaacgaaggagaaag
caaaagaggagaatgagcaagtctgccatgagggccatgatcatggtcatgtcctaa
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