Porphyrobacter sp. HT-58-2: CHX26_03465
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Entry
CHX26_03465 CDS
T05364
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
phz
Porphyrobacter sp. HT-58-2
Brite
KEGG Orthology (KO) [BR:
phz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phz03032
]
CHX26_03465 (gyrB)
03400 DNA repair and recombination proteins [BR:
phz03400
]
CHX26_03465 (gyrB)
Enzymes [BR:
phz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CHX26_03465 (gyrB)
DNA replication proteins [BR:
phz03032
]
Prokaryotic type
DNA Topoisomerases
CHX26_03465 (gyrB)
DNA repair and recombination proteins [BR:
phz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHX26_03465 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
GH18_BT1044-like
Motif
Other DBs
NCBI-ProteinID:
AUX70794
UniProt:
A0A2L0GNX5
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Position
complement(708231..710759)
Genome browser
AA seq
842 aa
AA seq
DB search
MPNANEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEALAGHCDL
VLIELNPDGSVSVEDNGRGIPTGMHPEEGVSAAEVIMTQLHAGGKFENTSDDNAYKVSGG
LHGVGVSVVNALSEWLELTIWREGKEHWMRFEHGDAVAPLVVKGDAPKASGNADPNGFKK
GTRVTFKASHDTFKNVTEFDFEKLEHRYRELAFLNSGVRIKLRDLRHEEVVEHDLYYEGG
IAAFVKYLDRNKQALIPEPIAVSAEKDGIGIDVALEWNDSYYENVLAFTNNIPQRDGGTH
LAAFRAALTRTLNNYAERSGMLKKEKVSLSGEDMREGLTAIVSVKLPDPKFSSQTKDKLV
SSEVRSPLETLMGEKMTEWLEENPNDARAIIQKVIDAAAAREAARRAREMSRKGAMSVAS
LPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRDRKTQAILPLKGKILNVERARFDRII
SSKEVGTLIQAMGTGIRDEFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFHRQMPEIIK
AGHLFIAQPPLFKVAKGRSEVYLKDQAALDRYLVDAGLQGRVLETAGGSRSGADLREIVD
GALRLKNLLGFVPRRYDMGIVEQMALTGVLEPGLSGAGLAAALERAAGRLGAGDREARWS
ASQREDGTVVFERLWRGVTDVHEIDARFLASTEAHKLHSLAAAQAETYAAPVSLVRGDAA
AEETEPEPVATTDPLAGEVEDTPPVTAIPVDGAISRPTQLLEAIFAAGRKGLSIQRYKGL
GEMNAEQLWETTLDPENRALLQVKVEDADVTDEIFTRLMGDIVEPRREFIQDNALNVANL
DI
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
ctgcccaacgccaacgaatatggcgcggattcgatcaaggttctcaagggcctcgatgcc
gtgcgcaagcggccggggatgtatatcggcgacaccgacgacggctctggcctgcaccac
atggtgttcgaagtcagcgacaacgcgatcgacgaggcgctggcggggcattgcgacctt
gttctgatcgaattgaaccctgatggctcggtttccgtcgaggataacgggcgcggcatc
cccaccggcatgcaccccgaagaaggcgtctcggccgccgaagtcatcatgacccagctg
cacgcggggggtaagttcgagaacacctcggacgataatgcctacaaggtttcgggcggc
ctgcacggcgtgggcgtgtcggtggtcaacgcactttccgaatggcttgaactcaccatc
tggcgcgaaggcaaggagcactggatgcgcttcgagcatggcgatgccgtcgccccgctg
gtggtgaagggtgatgcgcccaaggccagcggcaatgccgaccccaacggcttcaagaaa
ggcacccgcgtcaccttcaaggccagccacgataccttcaagaacgtcaccgaattcgat
ttcgagaagcttgagcaccgctaccgcgagctggccttcctcaattccggcgtgcgcatc
aagctgcgtgacctgcgccacgaggaggttgtcgagcatgatctctattacgaaggcggg
attgccgccttcgtcaaatatctcgaccgcaacaagcaggcgctgatccccgaacccatt
gctgtcagcgcggaaaaggacggtatcgggatcgacgtcgcgctcgaatggaacgattcc
tattacgagaacgtgctcgccttcaccaacaacatcccccagcgcgacggcggcacgcac
cttgctgccttccgcgccgcgctgacccgcacgctcaacaattatgccgagcgctcgggg
atgctgaagaaggaaaaggtcagcctgtcgggcgaagatatgcgcgaaggcctgaccgcg
atcgtcagcgtcaaactgcccgatcccaagttctccagccagaccaaggacaagctggtt
tcttccgaagtgcgctcaccgctcgaaaccctgatgggcgagaagatgaccgagtggctg
gaggaaaaccccaatgatgcccgcgcgatcatccagaaggtgatcgacgccgctgccgct
cgcgaagccgcgcgccgcgcccgcgaaatgagccgcaagggcgcaatgagcgtggcctcg
ctgcccggcaagctggcggactgtcaggagcgcgatccggccaagtccgaactgttcctg
gtcgagggcgattccgcaggcggttcggccaaacagggccgcgaccgcaagacgcaggcg
atcctgccgctcaagggcaagatcctgaacgtcgaacgcgcgcggttcgaccggatcatc
tcgtccaaggaagtcggcactctcatccaggcgatgggcaccggcatccgcgacgaattc
aacctcgaaaagctgcgctaccacaagatcgtcatcatgaccgacgcggacgtggacggg
gcgcatatccgcacgctgctgctgaccttcttccaccgccagatgcccgagatcatcaag
gccggacacctgttcatcgcccagccgccgctgttcaaggtcgccaaggggcggagcgag
gtctacctcaaggatcaggcggcgcttgatcgctatctcgtcgatgccgggctgcagggc
cgggtgctggaaacggcgggcggctcgcgttcgggcgccgacctgcgcgagatcgtcgac
ggggcgctgcgcctcaagaacctgctcggcttcgtgccgcgccgctatgacatgggcatt
gtcgagcagatggcgctgaccggtgtgctcgaacccggcctgtcgggcgcggggcttgcg
gctgcgctggaacgggccgccggacggctgggcgcgggcgaccgcgaagcccgctggagc
gcctcgcagcgcgaagacggcacggtggtgttcgaacgcctgtggcgcggcgtcaccgac
gtccacgaaatcgacgcgcgtttcctcgccagcaccgaggcgcacaagcttcacagcctc
gccgccgcgcaggccgaaacctatgccgcgccggtcagtctggtgcgcggggacgcggcc
gccgaggagacggagcccgaacccgttgccaccaccgatccgctcgccggtgaggtggaa
gacacgccgccggtcaccgcgatcccggtggacggcgcgatcagccgcccgacgcaattg
cttgaggcgatcttcgccgccgggcgcaagggcctgtcgatccagcgttacaagggcctt
ggcgaaatgaatgccgagcagctgtgggagaccacgctcgatcccgaaaaccgggcgctg
ctgcaggtcaaggtcgaggatgccgacgtgacggacgagatcttcacccgcctgatgggc
gacatcgtcgagccgcgacgggaattcattcaggataatgccctcaacgtggcgaatctc
gacatctag
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