Scheffersomyces stipitis: PICST_32086
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Entry
PICST_32086 CDS
T01023
Name
(RefSeq) predicted protein
Organism
pic
Scheffersomyces stipitis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
gag_pre-integrs
Retrotran_gag_4
rve_3
Motif
Other DBs
NCBI-GeneID:
4839106
NCBI-ProteinID:
XP_001384793
UniProt:
A3LVD8
LinkDB
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Position
5:648587..652652
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AA seq
1328 aa
AA seq
DB search
MNNPIQSTELPKQTVQQVMSQLNSGLMVIDTLLLRGRENFSEWKDWMTGMFSSCVLATEI
AAYLSEKELSITFTDQQALSHKLRELILKCMKPDVQSLFTHYSSGVETWKAVETKYAIAS
SRDAVGYLKYLFGGLADPTITTEAGFLIAEKLTAFMTKYDNDSMKALLFLYGTGNSKVRD
LFFSQVRSTPTVTADEVLNFFAYHDELTPPATSSALLVSSSSQSAYALTSLSSPSGPVTR
NLIKAKGTDSIWQLDCYNCYGCGHMAKNCPAPYREGEVPRMASRFGPGGPGKHRRRHGSR
PKPAAHYALADDASTFGFDQPGAYYAHLAHYTHYALLASSSSASFIFDSGASTHICNDRS
LFHDIVPHSGSVMNAGHEPLSIAGRGTLVFDLHGQKIRVFNVLYVPDCTQNLLSISAVTT
TGDKLVISHDDIVHPKYGQLATRDSRNLYLSCLEIVRPSTVSRVNHSAYSAPAPVTVAAP
AADAGVAPISASALVHARLGHPSPTVVRSALKYPNMPRTAVHDSISCEACLSSKSTRVIP
KTTTGPVTSAPLQLLHCDLSGPHAGGPSSLFYFCILLDDFTRFKAVGPLLKKSDAADFII
KVIKAWTNHFSSRGGYRVCNFRSDNGGEFVNSTLTSFFAAEGIQTQLTVPGNSHQNGRAE
RAIRSVLDKTRTMITASSLPSPLFPHALQHAAFLLNRLPTPVLQNRSPFELWHGARPILS
QLKVFGCAAFVNVPPNHRQSKLVARAIKGVYLGSDPFRKAHLVYDLATRQVITSSHVRFQ
ENVFPFARPSTSTVVSATSIGGGGSGGGSFPSISAPAPGLTQGPRVSSAPSPSPPSTPSG
STVSQSPGSSAASSSASAPVSPAASTTPSSQPPSTPTPAPASTPVPSSAPVPSSAPVPSS
APVPSATSVPSDTSVPSTSAALTAPSRAVVSAQRSDSPPSDSYESSDDSYTAPASREVPT
LTAPRTVPSLPAPRKVPSLPSTRKVPSLPSTRTVPSLPAPRTVPSLLPVPRNRPSAPTAP
LGLPHPAVEAPSPIPGSSSAIPMEIDSTDTEPEPMSEDGYDMEVVSDQEFFDAPEQYGTH
PRSSPLISTRSSMDVSSDQEEYPDPSTYMDIVVMDSDDLSSYHDSEMEDASDMDPLPLIR
PTSNMEMEDTSVTYPSPLTRHTPTTQTVVSSTPPPPPQPSPRVVQSDSPQSSPIIEVPDS
PPLQSRPQQFLLPPGLSPTRLIELPASGGMELILSSTDRALVPSNSEANNKLTHLVVSRP
PPVNGVKHKLTPVPSRDGTHPQTLKRAHRPILVPTRSQRQQDNQNLINYPQRQQIEYITT
DTVHLWSP
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgaataatccgattcaatctactgagcttccaaagcaaacagttcaacaggttatgagc
caattaaattctggcctcatggtcattgatactcttcttctcagaggccgtgagaacttt
ctggaatggaaagactggatgactggtatgttcagtagctgtgtcttggctacagagatt
gctgcttatctttcagagaaagaactttccatcacctttacggaccagcaggcgttgagc
cacaagctccgtgagcttattctcaagtgtatgaagcctgacgttcagtcattgttcacg
cactactctctgggagtcgaaacttggaaagctgtcgaaaccaagtatgcgatcgccagc
tctagggatgcggtcggttatctcaagtacttatttggtggccttgctgatccgaccatt
acgactgaagctgggttcttgattgctgaaaagttgactgcgtttatgactaagtacgat
aacgactccatgaaagcgctcctcttcctttatggtacggggaactccaaggttagagat
ctattcttttctcaagttcgcctgactcccaccgtgactgcggacgaagttctcaatttc
tttgcttatcatgatgagcttactccacctgccacgtcctccgccttgcttgtcctgtcc
tcgtctcaatctgcttatgcccttacgtccttgtcttctccttctggtcctgtcaccagg
aacttgatcaaggctaaaggtacggatctgatttggcagcttgattgctacaactgctat
gggtgtggtcacatggccaagaactgccctgctccttatcgtgagggtgaagttcctcgt
atggcttctcgcttcggtcctggcggtccaggaaagcaccgcaggaggcacggctctcgt
ccaaagcctgctgctcattatgctctcgctgatgatgctctgacttttggttttgaccag
cccggtgcttattatgctcatctcgctcactacacccactatgccctcttggcttcttct
tcctctgccagctttatttttgattcaggtgcttctacccacatttgtaacgatagaagt
ctcttccatgacatcgttcctcactctggttctgtcatgaacgccggtcacgagcctctc
tcgattgccggtcgtggtactcttgtgtttgatctccatggtcagaagattcgggtgttc
aatgttctttacgttcctgactgtactcagaatcttctttccatcctggctgttactact
acgggcgacaagcttgttatctctcatgatgatattgttcaccctaaatatggccaactt
gctaccagagacctgagaaatctttacttgctgtgtctcgaaattgtccgcccctcgact
gtctcgcgggttaaccactctgcctactcggcccccgctcctgttacggtcgctgctcct
gctgcggacgctggtgtggcacctatttctgcctctgctcttgtccatgctcgccttggc
cacccttccccgactgtcgttcgtctggccttgaaatatccgaacatgcctcgcacggct
gttcacgactcgatttcatgtgaagcatgtcttagctccaagagcactcgggttattccc
aaaacgaccaccggcccagtcacatctgctcccttgcaacttcttcactgtgatttgtcc
ggtcctcatgccggtggtccctcctcgttgttttatttttgtattcttcttgacgacttt
actcgcttcaaggctgttgggcctcttctcaagaaatcggatgctgcggacttcattatc
aaagttattaaggcatggacaaaccacttctccagtcgtggtggctaccgtgtctgtaac
tttcgttctgacaatggaggtgagtttgttaatctgacgcttacttcattctttgcggca
gaagggatccagacccagctcactgtgcctggtaactcacaccaaaatggacgtgctgaa
agagcgattcgctccgttcttgacaaaacgcgtaccatgatcactgcgagctctcttcct
tcgcccctcttcccgcatgcactccaacatgctgcatttctcctaaacaggctaccaaca
cctgttctccaaaatcgctcgccatttgaactctggcatggcgcgaggcctatcttatct
caacttaaagtgtttgggtgtgctgcctttgtgaatgttccacccaatcaccgtcaactg
aagttggtcgctcgtgcaatcaagggtgtttatcttggatctgatccgtttcggaaagct
catcttgtttatgatctcgctaccagacaagtgattacctcttctcatgttcggttccag
gaaaatgtctttccttttgcaagacctctgacgtctactgtcgtgtcggctacctccatt
ggtggtggtggtagtggtggtggcagttttccttctattctggcacctgctccaggcctc
actcagggtcctcgtgtgtctctggccccatctccctcgcctccatccacgccatctggc
agtactgtttctcaatcgccaggttcatctgcagctctgtcgtctgcttcggcaccggtc
tctcctgctgcatctactactcctctgtcgcagcctccgtcgactcctactccggcgcct
gcttctactccggtaccttcttctgctccggtaccttcttctgctccggtaccttcttct
gctccggtaccttctgctactctggtaccttctgatactctggtaccttctacttctgcg
gccctaactgcaccatcccgtgccgttgttctggctcagaggtccgatctgcctccctct
gactcctacgagctgtctgacgactcctatacagctcctgcttctcgtgaggtaccaact
cttactgctcctcgtacggtaccatcccttcctgctcctcgtaaggtaccctcccttcct
tcaactcgtaaggtgccatctcttccttctactcgtacggtaccttcacttccagcacct
cgtacagtaccctcccttcttcctgttcctcgcaatagaccatctgctcctactgctcct
ctcggtcttcctcatcctgcggttgaggctccatcccctatccctggatcttcatcagcc
atacccatggaaatagactctacggatactgagcctgaacctatgtctgaagatggctat
gacatggaagtggtctctgatcaggaattcttcgatgctcctgagcaatacggtactcat
ccccgttcgtcacctttgatctccacgcgctcctctatggatgttctgctggatcaggaa
gaatatccagatccgtccacctatatggacatcgtggtgatggattcggatgacctttct
tcttatcatgactcggaaatggaggatgcctccgacatggatccccttccgcttattcgt
cctacttctaatatggaaatggaggacacctccgtcacttatcctctgccgctcactcgt
catactcctactacgcagactgtggtgtcctccactcctccacctcctcctcaaccactg
cctcgggtcgttcaatccgactctccacaatcctctcctattattgaggttcctgattct
cccccacttcaatctcgtcctcagcaattcctcctccctccgggtctttctcctactcgt
ctcattgagttgcctgcttcaggggggatggaactcatcctatcgctgactgaccgtgcc
ttggtccctctgaattctgaggccaacaacaaactaactcatcttgttgtatcgcgtcct
cctccggtgaatggggttaagcataaactcaccccggttccgtcgcgtgatggaacacat
ccacaaacactcaagcgggcacacagaccaatacttgttccaacacggtcacagagacaa
caggacaatcaaaatttgatcaactatccacagagacaacaaattgagtacatcaccacc
gatacagtgcatttatggtcaccataa
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